RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 ZNF503Q96F45 646 aa12.09□□□□□ -0.47
HIF3A-211ENST00000528563 PAXXQ9BUH6 204 aa12.09□□□□□ -0.47
HIF3A-211ENST00000528563 PPP1R14DQ9NXH3 145 aa12.09□□□□□ -0.47
HIF3A-211ENST00000528563 DYNC2H1Q8NCM8 4307 aaKnown RBP12.09□□□□□ -0.47
HIF3A-211ENST00000528563 G3V3Q6 166 aa12.08□□□□□ -0.47
HIF3A-211ENST00000528563 M0R3E3 92 aa12.08□□□□□ -0.47
HIF3A-211ENST00000528563 ZNF266Q14584 549 aa12.08□□□□□ -0.47
HIF3A-211ENST00000528563 INO80EQ8NBZ0 244 aaPredicted RBP12.08□□□□□ -0.47
HIF3A-211ENST00000528563 TNFSF18Q9UNG2 199 aa12.08□□□□□ -0.47
HIF3A-211ENST00000528563 PRELID1Q9Y255 219 aa12.08□□□□□ -0.47
HIF3A-211ENST00000528563 TRAV12-2A0A075B6T6 113 aa12.08□□□□□ -0.48
HIF3A-211ENST00000528563 TMEM189A5PLL7 270 aa12.08□□□□□ -0.48
HIF3A-211ENST00000528563 RNF222A6NCQ9 220 aa12.08□□□□□ -0.48
HIF3A-211ENST00000528563 INSP01308 110 aa12.08□□□□□ -0.48
HIF3A-211ENST00000528563 OR10J4P0C629 311 aa12.08□□□□□ -0.48
HIF3A-211ENST00000528563 BAP18Q8IXM2 172 aa12.08□□□□□ -0.48
HIF3A-211ENST00000528563 EXOC3-AS1Q8N2X6 119 aa12.08□□□□□ -0.48
HIF3A-211ENST00000528563 CELA1Q9UNI1 258 aa12.08□□□□□ -0.48
HIF3A-211ENST00000528563 KLK5Q9Y337 293 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-211ENST00000528563 FXYD6-FXYD2A0A087WZ82 144 aa12.07□□□□□ -0.48
HIF3A-211ENST00000528563 NPIPB6E9PJ23 425 aa12.07□□□□□ -0.48
HIF3A-211ENST00000528563 HBE1P02100 147 aa12.07□□□□□ -0.48
HIF3A-211ENST00000528563 M6PRP20645 277 aa12.07□□□□□ -0.48
HIF3A-211ENST00000528563 CDKN1BP46527 198 aa12.07□□□□□ -0.48
HIF3A-211ENST00000528563 C12orf74Q32Q52 190 aa12.07□□□□□ -0.48
HIF3A-211ENST00000528563 ACOT6Q3I5F7 207 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-211ENST00000528563 RPP25LQ8N5L8 163 aaKnown RBP12.07□□□□□ -0.48
HIF3A-211ENST00000528563 TMEM208Q9BTX3 173 aa12.07□□□□□ -0.48
HIF3A-211ENST00000528563 OR7C2O60412 319 aa12.06□□□□□ -0.48
HIF3A-211ENST00000528563 CT45A10P0DMU9 189 aa12.06□□□□□ -0.48
HIF3A-211ENST00000528563 ICAM4Q14773 271 aa12.06□□□□□ -0.48
HIF3A-211ENST00000528563 RRN3P1Q2M238 152 aa12.06□□□□□ -0.48
HIF3A-211ENST00000528563 HSD17B11Q8NBQ5 300 aa12.06□□□□□ -0.48
HIF3A-211ENST00000528563 OR2G3Q8NGZ4 309 aa12.06□□□□□ -0.48
HIF3A-211ENST00000528563 PSMG3Q9BT73 122 aaPredicted RBP12.06□□□□□ -0.48
HIF3A-211ENST00000528563 AAMDCQ9H7C9 122 aa12.06□□□□□ -0.48
HIF3A-211ENST00000528563 C11orf94C9JXX5 98 aa12.05□□□□□ -0.48
HIF3A-211ENST00000528563 PRM2P04554 102 aa12.05□□□□□ -0.48
HIF3A-211ENST00000528563 TSPOP30536 169 aa12.05□□□□□ -0.48
HIF3A-211ENST00000528563 EMP1P54849 157 aa12.05□□□□□ -0.48
HIF3A-211ENST00000528563 TAS2R45P59539 299 aa12.05□□□□□ -0.48
HIF3A-211ENST00000528563 RAB2AP61019 212 aa12.05□□□□□ -0.48
HIF3A-211ENST00000528563 KIR3DS1Q14943 382 aa12.05□□□□□ -0.48
HIF3A-211ENST00000528563 KHDC3LQ587J8 217 aa12.05□□□□□ -0.48
HIF3A-211ENST00000528563 LOC102723971A0A1B0GUV8 181 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 ZNF705GA8MUZ8 300 aaPredicted RBP12.04□□□□□ -0.48
HIF3A-211ENST00000528563 JTBO76095 146 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 SPART-AS1P0CW21 52 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 ATP6V0CP27449 155 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 SERF2P84101 59 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 Q6ZTC4 211 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 LYPD1Q8N2G4 141 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 TMEM256Q8N2U0 113 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 OR10G4Q8NGN3 311 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 OR10G9Q8NGN4 311 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 OR10G7Q8NGN6 311 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 PHYHIPLQ96FC7 376 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 LINC00477Q96M19 166 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 ODF3Q96PU9 254 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 AGPAT4-IT1Q9H0P7 198 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 RYR3Q15413 4870 aa12.04□□□□□ -0.48
HIF3A-211ENST00000528563 A0A1W2PPV4 95 aa12.03□□□□□ -0.48
HIF3A-211ENST00000528563 EIF3GO75821 320 aaKnown RBP eCLIP12.03□□□□□ -0.48
HIF3A-211ENST00000528563 RANP62826 216 aaKnown RBP12.03□□□□□ -0.48
HIF3A-211ENST00000528563 ERCC8Q13216 396 aa12.03□□□□□ -0.48
HIF3A-211ENST00000528563 RPL7L1Q6DKI1 246 aaKnown RBP12.03□□□□□ -0.48
HIF3A-211ENST00000528563 FAM122CQ6P4D5 195 aa12.03□□□□□ -0.48
HIF3A-211ENST00000528563 LINC01587Q99440 93 aa12.03□□□□□ -0.48
HIF3A-211ENST00000528563 DKK2Q9UBU2 259 aa12.03□□□□□ -0.48
HIF3A-211ENST00000528563 AZU1P20160 251 aa12.02□□□□□ -0.48
HIF3A-211ENST00000528563 UBE2L3P68036 154 aaKnown RBP12.02□□□□□ -0.48
HIF3A-211ENST00000528563 PQLC2Q6ZP29 291 aa12.02□□□□□ -0.48
HIF3A-211ENST00000528563 C9orf47Q6ZRZ4 202 aa12.02□□□□□ -0.48
HIF3A-211ENST00000528563 ZNF767PQ75MW2 155 aa12.02□□□□□ -0.48
HIF3A-211ENST00000528563 C2CD4CQ8TF44 421 aa12.02□□□□□ -0.48
HIF3A-211ENST00000528563 C20orf144Q9BQM9 153 aa12.02□□□□□ -0.48
HIF3A-211ENST00000528563 YTHDF2Q9Y5A9 579 aaKnown RBP12.02□□□□□ -0.48
HIF3A-211ENST00000528563 TRAV10A0A0B4J240 114 aa12.02□□□□□ -0.49
HIF3A-211ENST00000528563 LEPP41159 167 aa12.02□□□□□ -0.49
HIF3A-211ENST00000528563 TAS2R60P59551 318 aa12.02□□□□□ -0.49
HIF3A-211ENST00000528563 FAM222AQ5U5X8 452 aa12.02□□□□□ -0.49
HIF3A-211ENST00000528563 GFI1BQ5VTD9 330 aa12.02□□□□□ -0.49
HIF3A-211ENST00000528563 FAM19A4Q96LR4 140 aa12.02□□□□□ -0.49
HIF3A-211ENST00000528563 LYSTQ99698 3801 aa12.02□□□□□ -0.49
HIF3A-211ENST00000528563 SH3BGRL3Q9H299 93 aa12.02□□□□□ -0.49
HIF3A-211ENST00000528563 BORCS7-ASMTA0A0B4J1R7 106 aa12.01□□□□□ -0.49
HIF3A-211ENST00000528563 SMLR1H3BR10 107 aa12.01□□□□□ -0.49
HIF3A-211ENST00000528563 ARPC5O15511 151 aa12.01□□□□□ -0.49
HIF3A-211ENST00000528563 MBP02144 154 aa12.01□□□□□ -0.49
HIF3A-211ENST00000528563 GNPNAT1Q96EK6 184 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-211ENST00000528563 VGLL1Q99990 258 aa12.01□□□□□ -0.49
HIF3A-211ENST00000528563 Q9H3A6 140 aa12.01□□□□□ -0.49
HIF3A-211ENST00000528563 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
HIF3A-211ENST00000528563 IGKV2-40A0A087WW87 121 aaPredicted RBP12□□□□□ -0.49
HIF3A-211ENST00000528563 TEX48A0A1B0GUV7 120 aa12□□□□□ -0.49
HIF3A-211ENST00000528563 PLAC8L1A1L4L8 177 aa12□□□□□ -0.49
HIF3A-211ENST00000528563 H7BYZ3 331 aa12□□□□□ -0.49
HIF3A-211ENST00000528563 TAAR5O14804 337 aa12□□□□□ -0.49
HIF3A-211ENST00000528563 IGKV2D-40P01614 121 aaPredicted RBP12□□□□□ -0.49
HIF3A-211ENST00000528563 LINC00476Q8WZB0 136 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms