RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 M0R381 172 aa14.36□□□□□ -0.11
LTBP3-210ENST00000528516 CRXO43186 299 aaPredicted RBP14.36□□□□□ -0.11
LTBP3-210ENST00000528516 MBD6Q96DN6 1003 aa14.36□□□□□ -0.11
LTBP3-210ENST00000528516 SLC25A2Q9BXI2 301 aa14.36□□□□□ -0.11
LTBP3-210ENST00000528516 TCRBV4S1A1TA0A5B7 111 aa14.36□□□□□ -0.11
LTBP3-210ENST00000528516 SRD5A1P18405 259 aa14.36□□□□□ -0.11
LTBP3-210ENST00000528516 CACNG8Q8WXS5 425 aa14.36□□□□□ -0.11
LTBP3-210ENST00000528516 TM4SF5O14894 197 aa14.35□□□□□ -0.11
LTBP3-210ENST00000528516 CLEC19AQ6UXS0 136 aa14.35□□□□□ -0.11
LTBP3-210ENST00000528516 RAXQ9Y2V3 346 aa14.35□□□□□ -0.11
LTBP3-210ENST00000528516 DSPP15924 2871 aaKnown RBP14.35□□□□□ -0.11
LTBP3-210ENST00000528516 TMEM78Q5T7P6 136 aa14.35□□□□□ -0.11
LTBP3-210ENST00000528516 C11orf53Q8IXP5 236 aa14.35□□□□□ -0.11
LTBP3-210ENST00000528516 NHP2Q9NX24 153 aaKnown RBP14.35□□□□□ -0.11
LTBP3-210ENST00000528516 A0A1B0GUT8 65 aa14.35□□□□□ -0.11
LTBP3-210ENST00000528516 B9A039 149 aa14.35□□□□□ -0.11
LTBP3-210ENST00000528516 FAM74A4Q5TZK3 123 aa14.35□□□□□ -0.11
LTBP3-210ENST00000528516 UFSP1Q6NVU6 142 aa14.35□□□□□ -0.11
LTBP3-210ENST00000528516 ZNF414Q96IQ9 312 aa14.35□□□□□ -0.11
LTBP3-210ENST00000528516 GAGE12HA6NDE8 117 aa14.34□□□□□ -0.11
LTBP3-210ENST00000528516 SMAD7O15105 426 aaKnown RBP14.34□□□□□ -0.11
LTBP3-210ENST00000528516 RNASE2P10153 161 aaKnown RBP14.34□□□□□ -0.11
LTBP3-210ENST00000528516 LINC01545Q5VT33 79 aa14.34□□□□□ -0.11
LTBP3-210ENST00000528516 TMEM219Q86XT9 240 aa14.34□□□□□ -0.11
LTBP3-210ENST00000528516 SVIPQ8NHG7 77 aa14.34□□□□□ -0.11
LTBP3-210ENST00000528516 FRYQ5TBA9 3013 aa14.34□□□□□ -0.11
LTBP3-210ENST00000528516 EVI2AP22794 236 aa14.34□□□□□ -0.11
LTBP3-210ENST00000528516 C21orf62Q9NYP8 219 aa14.34□□□□□ -0.11
LTBP3-210ENST00000528516 K7ERJ3 54 aa14.34□□□□□ -0.11
LTBP3-210ENST00000528516 SCGB1C2P0DMR2 95 aa14.34□□□□□ -0.11
LTBP3-210ENST00000528516 SSBP2P81877 361 aaPredicted RBP14.34□□□□□ -0.11
LTBP3-210ENST00000528516 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.34□□□□□ -0.11
LTBP3-210ENST00000528516 PSMB11A5LHX3 300 aa14.33□□□□□ -0.12
LTBP3-210ENST00000528516 Q1RN00 199 aa14.33□□□□□ -0.12
LTBP3-210ENST00000528516 GTSF1Q8WW33 167 aa14.33□□□□□ -0.12
LTBP3-210ENST00000528516 IGKV2-40A0A087WW87 121 aaPredicted RBP14.33□□□□□ -0.12
LTBP3-210ENST00000528516 H7C2G1 150 aa14.33□□□□□ -0.12
LTBP3-210ENST00000528516 IGKV2D-40P01614 121 aaPredicted RBP14.33□□□□□ -0.12
LTBP3-210ENST00000528516 BCL6BQ8N143 479 aaPredicted RBP14.33□□□□□ -0.12
LTBP3-210ENST00000528516 OR4X2Q8NGF9 303 aa14.33□□□□□ -0.12
LTBP3-210ENST00000528516 ZNF747Q9BV97 191 aa14.33□□□□□ -0.12
LTBP3-210ENST00000528516 A0A1W2PPI3 338 aa14.33□□□□□ -0.12
LTBP3-210ENST00000528516 TMEM178BH3BS89 294 aa14.33□□□□□ -0.12
LTBP3-210ENST00000528516 CCDC144NLQ6NUI1 221 aa14.33□□□□□ -0.12
LTBP3-210ENST00000528516 PCP2Q8IVA1 136 aa14.33□□□□□ -0.12
LTBP3-210ENST00000528516 SOX21Q9Y651 276 aaPredicted RBP14.33□□□□□ -0.12
LTBP3-210ENST00000528516 TMEM160Q9NX00 188 aa14.32□□□□□ -0.12
LTBP3-210ENST00000528516 C15orf65H3BRN8 121 aa14.32□□□□□ -0.12
LTBP3-210ENST00000528516 FAM106CPP0CH98 169 aa14.32□□□□□ -0.12
LTBP3-210ENST00000528516 IGHV1-8P0DP01 117 aa14.32□□□□□ -0.12
LTBP3-210ENST00000528516 ETDBQ3ZM63 59 aa14.32□□□□□ -0.12
LTBP3-210ENST00000528516 A0A1B0GXF2 115 aa14.32□□□□□ -0.12
LTBP3-210ENST00000528516 IFI27P40305 119 aaPredicted RBP14.32□□□□□ -0.12
LTBP3-210ENST00000528516 SRSF9Q13242 221 aaKnown RBP eCLIP14.32□□□□□ -0.12
LTBP3-210ENST00000528516 C17orf58Q2M2W7 97 aa14.32□□□□□ -0.12
LTBP3-210ENST00000528516 OR9G4Q8NGQ1 327 aa14.32□□□□□ -0.12
LTBP3-210ENST00000528516 TMEM14BQ9NUH8 114 aa14.32□□□□□ -0.12
LTBP3-210ENST00000528516 K7EMI3 77 aa14.31□□□□□ -0.12
LTBP3-210ENST00000528516 IGHG3P01860 377 aa14.31□□□□□ -0.12
LTBP3-210ENST00000528516 PLA2G2CQ5R387 149 aa14.31□□□□□ -0.12
LTBP3-210ENST00000528516 LINC00322Q6ZN03 302 aaPredicted RBP14.31□□□□□ -0.12
LTBP3-210ENST00000528516 NEGR1Q7Z3B1 354 aa14.31□□□□□ -0.12
LTBP3-210ENST00000528516 RNF125Q96EQ8 232 aa14.31□□□□□ -0.12
LTBP3-210ENST00000528516 WT1-ASQ06250 92 aa14.31□□□□□ -0.12
LTBP3-210ENST00000528516 MSMPQ1L6U9 139 aa14.31□□□□□ -0.12
LTBP3-210ENST00000528516 ZNF672Q499Z4 452 aaPredicted RBP14.31□□□□□ -0.12
LTBP3-210ENST00000528516 PRELID3AQ96N28 172 aa14.31□□□□□ -0.12
LTBP3-210ENST00000528516 CD300EQ496F6 205 aaPredicted RBP14.31□□□□□ -0.12
LTBP3-210ENST00000528516 SMKR1H3BMG3 65 aa14.3□□□□□ -0.12
LTBP3-210ENST00000528516 FAM167A-AS1Q96KT0 104 aa14.3□□□□□ -0.12
LTBP3-210ENST00000528516 TNRC6AQ8NDV7 1962 aaKnown RBP14.3□□□□□ -0.12
LTBP3-210ENST00000528516 TRAV26-1A0A087WT03 109 aa14.3□□□□□ -0.12
LTBP3-210ENST00000528516 FAM215AQ9Y5M1 114 aa14.3□□□□□ -0.12
LTBP3-210ENST00000528516 ARMS2P0C7Q2 107 aa14.29□□□□□ -0.12
LTBP3-210ENST00000528516 SLC25A48Q6ZT89 311 aaKnown RBP14.29□□□□□ -0.12
LTBP3-210ENST00000528516 SH2D6Q7Z4S9 175 aa14.29□□□□□ -0.12
LTBP3-210ENST00000528516 NEU4Q8WWR8 484 aaPredicted RBP14.29□□□□□ -0.12
LTBP3-210ENST00000528516 NDPQ00604 133 aa14.29□□□□□ -0.12
LTBP3-210ENST00000528516 MYOZ3Q8TDC0 251 aa14.29□□□□□ -0.12
LTBP3-210ENST00000528516 IGHV3OR16-12A0A075B7B8 117 aa14.28□□□□□ -0.12
LTBP3-210ENST00000528516 PSG8Q9UQ74 426 aa14.28□□□□□ -0.12
LTBP3-210ENST00000528516 MBD3L4A6NDZ8 208 aaPredicted RBP14.28□□□□□ -0.12
LTBP3-210ENST00000528516 MBD3L3A6NE82 208 aaPredicted RBP14.28□□□□□ -0.12
LTBP3-210ENST00000528516 MBD3L5A6NJ08 208 aaPredicted RBP14.28□□□□□ -0.12
LTBP3-210ENST00000528516 MBD3L2Q8NHZ7 208 aaPredicted RBP14.28□□□□□ -0.12
LTBP3-210ENST00000528516 WFDC2Q14508 124 aa14.28□□□□□ -0.12
LTBP3-210ENST00000528516 ARPC1AQ92747 370 aa14.28□□□□□ -0.12
LTBP3-210ENST00000528516 E7EQL1 145 aa14.27□□□□□ -0.12
LTBP3-210ENST00000528516 CFHR2P36980 270 aa14.27□□□□□ -0.12
LTBP3-210ENST00000528516 TTTY13Q9BZ97 58 aa14.27□□□□□ -0.12
LTBP3-210ENST00000528516 TET2Q6N021 2002 aaPredicted RBP14.27□□□□□ -0.12
LTBP3-210ENST00000528516 IGHV1-3A0A0C4DH29 117 aa14.27□□□□□ -0.13
LTBP3-210ENST00000528516 NBR2O15453 112 aa14.27□□□□□ -0.13
LTBP3-210ENST00000528516 METTL26Q96S19 204 aa14.27□□□□□ -0.13
LTBP3-210ENST00000528516 GRNP28799 593 aaKnown RBP14.27□□□□□ -0.13
LTBP3-210ENST00000528516 BRD3OSQ6XYD6 125 aa14.27□□□□□ -0.13
LTBP3-210ENST00000528516 A0A1B0GWB2 263 aa14.26□□□□□ -0.13
LTBP3-210ENST00000528516 FAM106AQ4KMX7 169 aa14.26□□□□□ -0.13
LTBP3-210ENST00000528516 TRGV3P03979 118 aa14.26□□□□□ -0.13
LTBP3-210ENST00000528516 AMTNQ6UX39 209 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms