RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 RRN3P1Q2M238 152 aa6.91□□□□□ -1.3
CHD7-208ENST00000528280 COMMD7Q86VX2 200 aa6.91□□□□□ -1.3
CHD7-208ENST00000528280 C20orf173Q96LM9 149 aa6.91□□□□□ -1.3
CHD7-208ENST00000528280 MGST2Q99735 147 aa6.91□□□□□ -1.3
CHD7-208ENST00000528280 SLC35B3Q9H1N7 401 aa6.91□□□□□ -1.3
CHD7-208ENST00000528280 C11orf1Q9H5F2 150 aa6.91□□□□□ -1.3
CHD7-208ENST00000528280 PXMP4Q9Y6I8 212 aa6.91□□□□□ -1.3
CHD7-208ENST00000528280 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 RNF222A6NCQ9 220 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 KRBOX1C9JBD0 128 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 INSP01308 110 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 DEFB1P60022 68 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 EIF5AP63241 154 aaKnown RBP6.9□□□□□ -1.3
CHD7-208ENST00000528280 PRR20EP86478 221 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 PRR20CP86479 221 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 PRR20DP86480 221 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 PRR20BP86481 221 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 PRR20AP86496 221 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 C12orf74Q32Q52 190 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 TOR2AQ5JU69 321 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 Q6ZTC4 211 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 TMEM256Q8N2U0 113 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 INO80EQ8NBZ0 244 aaPredicted RBP6.9□□□□□ -1.3
CHD7-208ENST00000528280 OR8A1Q8NGG7 326 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 STOML3Q8TAV4 291 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 PPP1R1CQ8WVI7 109 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 TMEM37Q8WXS4 190 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 C17orf77Q96MU5 243 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 NIPSNAP3BQ9BS92 247 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 SLC39A9Q9NUM3 307 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 APLNQ9ULZ1 77 aa6.9□□□□□ -1.3
CHD7-208ENST00000528280 MRPS12O15235 138 aaKnown RBP6.89□□□□□ -1.31
CHD7-208ENST00000528280 NMBP08949 121 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 TSPOP30536 169 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 EMP1P54849 157 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 BAXQ07812 192 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 IGFL4Q6B9Z1 124 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 AMTNQ6UX39 209 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 C1orf158Q8N1D5 194 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 RNF182Q8N6D2 247 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 OR10J6PQ8NGY7 276 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 RPUSD4Q96CM3 377 aaKnown RBP6.89□□□□□ -1.31
CHD7-208ENST00000528280 C20orf144Q9BQM9 153 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 NDUFAF3Q9BU61 184 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 ZNF331Q9NQX6 463 aaPredicted RBP6.89□□□□□ -1.31
CHD7-208ENST00000528280 KCNIP2Q9NS61 270 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 DKK2Q9UBU2 259 aa6.89□□□□□ -1.31
CHD7-208ENST00000528280 IGHV4-4A0A075B6R2 117 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 LOC102723971A0A1B0GUV8 181 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 IGSF23A1L1A6 192 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 TAAR5O14804 337 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 ZNF253O75346 499 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 P0DMU3 169 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 FAM231AP0DMU4 169 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 FAM231CP0DMU5 169 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 FGF7P21781 194 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 HIST1H1AQ02539 215 aaPredicted RBP6.88□□□□□ -1.31
CHD7-208ENST00000528280 LINC01587Q99440 93 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 ARPC5LQ9BPX5 153 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 TMEM14CQ9P0S9 112 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 PRELID1Q9Y255 219 aa6.88□□□□□ -1.31
CHD7-208ENST00000528280 UBE2L5PA0A1B0GUS4 154 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 LYRM9A8MSI8 78 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 C17orf112F2Z3M2 114 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 IGLC2P0DOY2 106 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 TPT1P13693 172 aaKnown RBP6.87□□□□□ -1.31
CHD7-208ENST00000528280 CDKN1BP46527 198 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 TAS2R60P59551 318 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 NHLH2Q02577 135 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 SPINK13Q1W4C9 94 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 FAM222AQ5U5X8 452 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 MIC13Q5XKP0 118 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 EIF5AL1Q6IS14 154 aaKnown RBP6.87□□□□□ -1.31
CHD7-208ENST00000528280 UQCC3Q6UW78 93 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 ZNF493Q6ZR52 646 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 MRPL53Q96EL3 112 aaKnown RBP6.87□□□□□ -1.31
CHD7-208ENST00000528280 SAT2Q96F10 170 aaPredicted RBP6.87□□□□□ -1.31
CHD7-208ENST00000528280 AQP10Q96PS8 301 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 CELA1Q9UNI1 258 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 ABCA13Q86UQ4 5058 aa6.87□□□□□ -1.31
CHD7-208ENST00000528280 M0R2Z0 102 aa6.86□□□□□ -1.31
CHD7-208ENST00000528280 CRXO43186 299 aaPredicted RBP6.86□□□□□ -1.31
CHD7-208ENST00000528280 HIST1H1EP10412 219 aaKnown RBP6.86□□□□□ -1.31
CHD7-208ENST00000528280 DAD1P61803 113 aa6.86□□□□□ -1.31
CHD7-208ENST00000528280 PDE6HQ13956 83 aa6.86□□□□□ -1.31
CHD7-208ENST00000528280 ALKAL2Q6UX46 152 aa6.86□□□□□ -1.31
CHD7-208ENST00000528280 OR5C1Q8NGR4 320 aa6.86□□□□□ -1.31
CHD7-208ENST00000528280 ODF3Q96PU9 254 aa6.86□□□□□ -1.31
CHD7-208ENST00000528280 NPCDR1Q9BY65 106 aa6.86□□□□□ -1.31
CHD7-208ENST00000528280 MBD2Q9UBB5 411 aa6.86□□□□□ -1.31
CHD7-208ENST00000528280 YTHDF2Q9Y5A9 579 aaKnown RBP6.86□□□□□ -1.31
CHD7-208ENST00000528280 TIMM9Q9Y5J7 89 aa6.86□□□□□ -1.31
CHD7-208ENST00000528280 RAB19A4D1S5 217 aa6.85□□□□□ -1.31
CHD7-208ENST00000528280 H3BQ15 152 aa6.85□□□□□ -1.31
CHD7-208ENST00000528280 TEX46H3BTG2 121 aa6.85□□□□□ -1.31
CHD7-208ENST00000528280 H7BYZ3 331 aa6.85□□□□□ -1.31
CHD7-208ENST00000528280 LEPP41159 167 aa6.85□□□□□ -1.31
CHD7-208ENST00000528280 LRRC37A5PQ49AS3 106 aa6.85□□□□□ -1.31
CHD7-208ENST00000528280 BAP18Q8IXM2 172 aa6.85□□□□□ -1.31
CHD7-208ENST00000528280 RPP25LQ8N5L8 163 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms