RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 LINC01587Q99440 93 aa11.1□□□□□ -0.63
CAPN1-213ENST00000527897 RNF126Q9BV68 326 aa11.1□□□□□ -0.63
CAPN1-213ENST00000527897 PARD6GQ9BYG4 376 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-213ENST00000527897 ZNF586Q9NXT0 402 aa11.1□□□□□ -0.63
CAPN1-213ENST00000527897 TEX48A0A1B0GUV7 120 aa11.09□□□□□ -0.63
CAPN1-213ENST00000527897 J3KRW8 73 aa11.09□□□□□ -0.63
CAPN1-213ENST00000527897 PET100P0DJ07 73 aa11.09□□□□□ -0.63
CAPN1-213ENST00000527897 PYYP10082 97 aa11.09□□□□□ -0.63
CAPN1-213ENST00000527897 DAD1P61803 113 aa11.09□□□□□ -0.63
CAPN1-213ENST00000527897 GUK1Q16774 197 aa11.09□□□□□ -0.63
CAPN1-213ENST00000527897 CHAC2Q8WUX2 184 aa11.09□□□□□ -0.63
CAPN1-213ENST00000527897 BLNKQ8WV28 456 aa11.09□□□□□ -0.63
CAPN1-213ENST00000527897 SAT2Q96F10 170 aaPredicted RBP11.09□□□□□ -0.63
CAPN1-213ENST00000527897 MPC2O95563 127 aa11.08□□□□□ -0.64
CAPN1-213ENST00000527897 CDKN1BP46527 198 aa11.08□□□□□ -0.64
CAPN1-213ENST00000527897 NDUFAF3Q9BU61 184 aa11.08□□□□□ -0.64
CAPN1-213ENST00000527897 SMIM3Q9BZL3 60 aa11.08□□□□□ -0.64
CAPN1-213ENST00000527897 TIMM9Q9Y5J7 89 aa11.08□□□□□ -0.64
CAPN1-213ENST00000527897 AZU1P20160 251 aa11.07□□□□□ -0.64
CAPN1-213ENST00000527897 MIR17HGQ75NE6 70 aa11.07□□□□□ -0.64
CAPN1-213ENST00000527897 WDR61Q9GZS3 305 aaKnown RBP11.07□□□□□ -0.64
CAPN1-213ENST00000527897 TRBV19A0A075B6N1 114 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 C17orf112F2Z3M2 114 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 M0R3E3 92 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 TSPOP30536 169 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 KIR3DS1Q14943 382 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 TMEM256Q8N2U0 113 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 ATP5SQ99766 215 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 KCNIP2Q9NS61 270 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 MBD2Q9UBB5 411 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 HSPB11Q9Y547 144 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 ALG5Q9Y673 324 aa11.06□□□□□ -0.64
CAPN1-213ENST00000527897 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
CAPN1-213ENST00000527897 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
CAPN1-213ENST00000527897 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
CAPN1-213ENST00000527897 RPL12P30050 165 aaKnown RBP11.05□□□□□ -0.64
CAPN1-213ENST00000527897 FCN2Q15485 313 aa11.05□□□□□ -0.64
CAPN1-213ENST00000527897 EXOC3-AS1Q8N2X6 119 aa11.05□□□□□ -0.64
CAPN1-213ENST00000527897 SCGB1C1Q8TD33 95 aa11.05□□□□□ -0.64
CAPN1-213ENST00000527897 SLC25A2Q9BXI2 301 aa11.05□□□□□ -0.64
CAPN1-213ENST00000527897 TMEM14CQ9P0S9 112 aa11.05□□□□□ -0.64
CAPN1-213ENST00000527897 ZNF253O75346 499 aa11.04□□□□□ -0.64
CAPN1-213ENST00000527897 NDUFB4O95168 129 aa11.04□□□□□ -0.64
CAPN1-213ENST00000527897 IFNA5P01569 189 aa11.04□□□□□ -0.64
CAPN1-213ENST00000527897 TAS2R60P59551 318 aa11.04□□□□□ -0.64
CAPN1-213ENST00000527897 ERCC8Q13216 396 aa11.04□□□□□ -0.64
CAPN1-213ENST00000527897 FFAR4Q5NUL3 377 aa11.04□□□□□ -0.64
CAPN1-213ENST00000527897 GFI1BQ5VTD9 330 aa11.04□□□□□ -0.64
CAPN1-213ENST00000527897 BIRC6Q9NR09 4857 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 LYRM9A8MSI8 78 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 OR10J4P0C629 311 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 CT45A10P0DMU9 189 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 LEPP41159 167 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 ICAM4Q14773 271 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 FAM122CQ6P4D5 195 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 C16orf74Q96GX8 76 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 PAXXQ9BUH6 204 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 OR51M1Q9H341 326 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 AAMDCQ9H7C9 122 aa11.03□□□□□ -0.64
CAPN1-213ENST00000527897 FRAS1Q86XX4 4008 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 TRAV12-3A0A0B4J271 114 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 NPIPB6E9PJ23 425 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 H7BYZ3 331 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 OR7C2O60412 319 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 PTTG1O95997 202 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 P0DMU3 169 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 FAM231AP0DMU4 169 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 FAM231CP0DMU5 169 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 PDE6HQ13956 83 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 OXA1LQ15070 435 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 UBE2DNLQ8IWF7 75 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 FAM167A-AS1Q96KT0 104 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 MRPL32Q9BYC8 188 aaKnown RBP11.02□□□□□ -0.65
CAPN1-213ENST00000527897 FUT9Q9Y231 359 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 PRELID1Q9Y255 219 aa11.02□□□□□ -0.65
CAPN1-213ENST00000527897 DNAH6Q9C0G6 4158 aa11.01□□□□□ -0.65
CAPN1-213ENST00000527897 IGKV2-40A0A087WW87 121 aaPredicted RBP11.01□□□□□ -0.65
CAPN1-213ENST00000527897 PLAC8L1A1L4L8 177 aa11.01□□□□□ -0.65
CAPN1-213ENST00000527897 IGKV2D-40P01614 121 aaPredicted RBP11.01□□□□□ -0.65
CAPN1-213ENST00000527897 NBEAP1P0C6P0 100 aa11.01□□□□□ -0.65
CAPN1-213ENST00000527897 TMEM88Q6PEY1 159 aa11.01□□□□□ -0.65
CAPN1-213ENST00000527897 CCDC28AQ8IWP9 274 aa11.01□□□□□ -0.65
CAPN1-213ENST00000527897 RNF141Q8WVD5 230 aa11.01□□□□□ -0.65
CAPN1-213ENST00000527897 MRPL53Q96EL3 112 aaKnown RBP11.01□□□□□ -0.65
CAPN1-213ENST00000527897 MED28Q9H204 178 aa11.01□□□□□ -0.65
CAPN1-213ENST00000527897 TIMM8BQ9Y5J9 83 aaPredicted RBP11.01□□□□□ -0.65
CAPN1-213ENST00000527897 DNAH10Q8IVF4 4471 aa11□□□□□ -0.65
CAPN1-213ENST00000527897 F5H768 121 aa11□□□□□ -0.65
CAPN1-213ENST00000527897 EIF3GO75821 320 aaKnown RBP eCLIP11□□□□□ -0.65
CAPN1-213ENST00000527897 TMEM263Q8WUH6 116 aaKnown RBP11□□□□□ -0.65
CAPN1-213ENST00000527897 PHYHIPLQ96FC7 376 aa11□□□□□ -0.65
CAPN1-213ENST00000527897 FAM210BQ96KR6 192 aa11□□□□□ -0.65
CAPN1-213ENST00000527897 C20orf144Q9BQM9 153 aa11□□□□□ -0.65
CAPN1-213ENST00000527897 NOP10Q9NPE3 64 aaKnown RBP11□□□□□ -0.65
CAPN1-213ENST00000527897 UBE2L3P68036 154 aaKnown RBP10.99□□□□□ -0.65
CAPN1-213ENST00000527897 ZNF493Q6ZR52 646 aa10.99□□□□□ -0.65
CAPN1-213ENST00000527897 POM121L12Q8N7R1 296 aa10.99□□□□□ -0.65
CAPN1-213ENST00000527897 FXYD5Q96DB9 178 aa10.99□□□□□ -0.65
CAPN1-213ENST00000527897 ODF3Q96PU9 254 aa10.99□□□□□ -0.65
CAPN1-213ENST00000527897 AGPAT4-IT1Q9H0P7 198 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms