RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 DTX4Q9Y2E6 619 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 IGHV4-28A0A0C4DH34 117 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 J3QQQ9 107 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 M0R1W7 72 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 TIMM23O14925 209 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 CFPP27918 469 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 TMEM52Q8NDY8 209 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 FAM236DA0A1B0GTK5 79 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 TRBV12-3P01733 135 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 FAM236CP0DP71 79 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 H0YGX0 51 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 CRYGBP07316 175 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 DEFB105AQ8NG35 78 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 RMI2Q96E14 147 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 C7orf69Q9H7B7 122 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 ABCA1O95477 2261 aa5.89□□□□□ -1.47
CTNND1-216ENST00000527467 ATRXP46100 2492 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 UBE2BP63146 152 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 FOXE3Q13461 319 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 C1QL2Q7Z5L3 287 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 TEN1Q86WV5 123 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 F8VRH5 84 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 IGHMP01871 453 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 LINC01590Q5TEZ4 76 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 SPSB3Q6PJ21 355 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 CASC2Q6XLA1 102 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 SH2D6Q7Z4S9 175 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 TRGV9Q99603 122 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 C22orf46C9J442 243 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 E9PQ18 207 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 CGB3P0DN86 165 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 RPL15P61313 204 aaKnown RBP5.88□□□□□ -1.47
CTNND1-216ENST00000527467 HERVK_113P63121 156 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 C3orf22Q8N5N4 141 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 RNF166Q96A37 237 aaPredicted RBP5.88□□□□□ -1.47
CTNND1-216ENST00000527467 SIGLEC8Q9NYZ4 499 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 NLRC5Q86WI3 1866 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 ARMS2P0C7Q2 107 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 CR1LQ2VPA4 569 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 ZNF329Q86UD4 541 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 Q8TAT8 98 aa5.88□□□□□ -1.47
CTNND1-216ENST00000527467 COL4A4P53420 1690 aaPredicted RBP5.87□□□□□ -1.47
CTNND1-216ENST00000527467 TECTAO75443 2155 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 LINC01545Q5VT33 79 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 Q6ZUT4 128 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 HEATR1Q9H583 2144 aaKnown RBP5.87□□□□□ -1.47
CTNND1-216ENST00000527467 IGHV2-70DA0A0C4DH43 119 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 LYRM9A8MSI8 78 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 TEX22C9J3V5 150 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 SAP30O75446 220 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 VPREB1P12018 145 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 RPP25LQ8N5L8 163 aaKnown RBP5.87□□□□□ -1.47
CTNND1-216ENST00000527467 LINC01560Q8TB33 94 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 CFHR4Q92496 578 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 MESP1Q9BRJ9 268 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 MRPL35Q9NZE8 188 aaKnown RBP5.87□□□□□ -1.47
CTNND1-216ENST00000527467 G3V4G9 280 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 IGKV1D-13A0A0B4J2D9 117 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 A0A0G2JK05 382 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 IGKV1-13P0DP09 117 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 Q86TA4 180 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 TMEM133Q9H2Q1 129 aa5.87□□□□□ -1.47
CTNND1-216ENST00000527467 ETDCA0A1B0GVM5 59 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 PRSS46E5RG02 174 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 JMJD7-PLA2G4BH0Y9G9 81 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 FOXS1O43638 330 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 CFHR2P36980 270 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 NDPQ00604 133 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 REG4Q9BYZ8 158 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 PNRC2Q9NPJ4 139 aaKnown RBP5.86□□□□□ -1.47
CTNND1-216ENST00000527467 ZNF492Q9P255 531 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 SPTA1P02549 2419 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 DOCK9Q9BZ29 2069 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 DEFB130BP0DP73 79 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 DEFB130AP0DP74 79 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 MORN2Q502X0 79 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 C17orf82Q86X59 251 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-216ENST00000527467 DEFB125Q8N687 156 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 LINC00527Q9UJ94 153 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 SPTBN1Q01082 2364 aaKnown RBP5.86□□□□□ -1.47
CTNND1-216ENST00000527467 TTC28Q96AY4 2481 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 IGLC7A0M8Q6 106 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 PSG7Q13046 419 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 DEFB113Q30KQ7 82 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 Q6ZWC4 215 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 CYTL1Q9NRR1 136 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 SDHAF1A6NFY7 115 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 UQCRQO14949 82 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 HS3ST6Q96QI5 342 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 CACNA1HO95180 2353 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 CCDC88CQ9P219 2028 aa5.86□□□□□ -1.47
CTNND1-216ENST00000527467 RALGAPA1Q6GYQ0 2036 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 A6NED7 52 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 C1QCP02747 245 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 HOXB4P17483 251 aaPredicted RBP5.85□□□□□ -1.47
CTNND1-216ENST00000527467 RPL35AP18077 110 aaKnown RBP5.85□□□□□ -1.47
CTNND1-216ENST00000527467 Q0VFX4 171 aa5.85□□□□□ -1.47
CTNND1-216ENST00000527467 MRPL14Q6P1L8 145 aaKnown RBP5.85□□□□□ -1.47
CTNND1-216ENST00000527467 ZCCHC24Q8N2G6 241 aaKnown RBP5.85□□□□□ -1.47
CTNND1-216ENST00000527467 OPRPNQ99935 248 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms