RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 ZNF705FA8MVS1 300 aaPredicted RBP12.19□□□□□ -0.46
SMCO4-204ENST00000527149 PRAC2D3DTV9 90 aa12.19□□□□□ -0.46
SMCO4-204ENST00000527149 APOC4P55056 127 aa12.19□□□□□ -0.46
SMCO4-204ENST00000527149 AMTNQ6UX39 209 aa12.19□□□□□ -0.46
SMCO4-204ENST00000527149 EXOC3-AS1Q8N2X6 119 aa12.19□□□□□ -0.46
SMCO4-204ENST00000527149 RPUSD4Q96CM3 377 aaKnown RBP12.19□□□□□ -0.46
SMCO4-204ENST00000527149 MRPL53Q96EL3 112 aaKnown RBP12.19□□□□□ -0.46
SMCO4-204ENST00000527149 RETNQ9HD89 108 aa12.19□□□□□ -0.46
SMCO4-204ENST00000527149 CLEC5AQ9NY25 188 aa12.19□□□□□ -0.46
SMCO4-204ENST00000527149 UMAD1C9J7I0 102 aa12.18□□□□□ -0.46
SMCO4-204ENST00000527149 NHLRC4P0CG21 123 aaPredicted RBP12.18□□□□□ -0.46
SMCO4-204ENST00000527149 GCHFRP30047 84 aa12.18□□□□□ -0.46
SMCO4-204ENST00000527149 CNN1P51911 297 aaKnown RBP12.18□□□□□ -0.46
SMCO4-204ENST00000527149 PSG9Q00887 426 aa12.18□□□□□ -0.46
SMCO4-204ENST00000527149 OR8A1Q8NGG7 326 aa12.18□□□□□ -0.46
SMCO4-204ENST00000527149 CSTL1Q9H114 145 aa12.18□□□□□ -0.46
SMCO4-204ENST00000527149 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
SMCO4-204ENST00000527149 UBE2CO00762 179 aa12.17□□□□□ -0.46
SMCO4-204ENST00000527149 ZNF705DP0CH99 300 aaPredicted RBP12.17□□□□□ -0.46
SMCO4-204ENST00000527149 ZNF705BP0CI00 300 aaPredicted RBP12.17□□□□□ -0.46
SMCO4-204ENST00000527149 EBLN2Q6P2I7 272 aa12.17□□□□□ -0.46
SMCO4-204ENST00000527149 MORN3Q6PF18 240 aaPredicted RBP12.17□□□□□ -0.46
SMCO4-204ENST00000527149 SPATA25Q9BR10 227 aa12.17□□□□□ -0.46
SMCO4-204ENST00000527149 DNAH7Q8WXX0 4024 aa12.16□□□□□ -0.46
SMCO4-204ENST00000527149 MAP1LC3B2A6NCE7 125 aa12.16□□□□□ -0.46
SMCO4-204ENST00000527149 CXorf1O96002 111 aa12.16□□□□□ -0.46
SMCO4-204ENST00000527149 ICAM4Q14773 271 aa12.16□□□□□ -0.46
SMCO4-204ENST00000527149 DEFB135Q30KP9 77 aa12.16□□□□□ -0.46
SMCO4-204ENST00000527149 Q6ZWC4 215 aa12.16□□□□□ -0.46
SMCO4-204ENST00000527149 LYPD1Q8N2G4 141 aa12.16□□□□□ -0.46
SMCO4-204ENST00000527149 MAP1LC3BQ9GZQ8 125 aa12.16□□□□□ -0.46
SMCO4-204ENST00000527149 Q9H3A6 140 aa12.16□□□□□ -0.46
SMCO4-204ENST00000527149 PRELID1Q9Y255 219 aa12.16□□□□□ -0.46
SMCO4-204ENST00000527149 BOLA2-SMG1P6H3BVE0 249 aa12.15□□□□□ -0.46
SMCO4-204ENST00000527149 CA1P00915 261 aaPredicted RBP12.15□□□□□ -0.46
SMCO4-204ENST00000527149 IGKV3-20P01619 116 aa12.15□□□□□ -0.46
SMCO4-204ENST00000527149 RANP62826 216 aaKnown RBP12.15□□□□□ -0.46
SMCO4-204ENST00000527149 HIST1H1AQ02539 215 aaPredicted RBP12.15□□□□□ -0.46
SMCO4-204ENST00000527149 CSNK1G2-AS1Q8NCQ2 148 aa12.15□□□□□ -0.46
SMCO4-204ENST00000527149 OR4B1Q8NGF8 309 aa12.15□□□□□ -0.46
SMCO4-204ENST00000527149 FAM213BQ8TBF2 198 aa12.15□□□□□ -0.46
SMCO4-204ENST00000527149 OVOL2Q9BRP0 275 aa12.15□□□□□ -0.46
SMCO4-204ENST00000527149 SLC35B3Q9H1N7 401 aa12.15□□□□□ -0.46
SMCO4-204ENST00000527149 AAMDCQ9H7C9 122 aa12.15□□□□□ -0.46
SMCO4-204ENST00000527149 OTORQ9NRC9 128 aa12.15□□□□□ -0.46
SMCO4-204ENST00000527149 NPIPB6E9PJ23 425 aa12.14□□□□□ -0.47
SMCO4-204ENST00000527149 DUSP14O95147 198 aaKnown RBP12.14□□□□□ -0.47
SMCO4-204ENST00000527149 FGF8P55075 233 aaPredicted RBP12.14□□□□□ -0.47
SMCO4-204ENST00000527149 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
SMCO4-204ENST00000527149 MBD3L1Q8WWY6 194 aa12.14□□□□□ -0.47
SMCO4-204ENST00000527149 RNF183Q96D59 192 aa12.14□□□□□ -0.47
SMCO4-204ENST00000527149 TMPRSS5Q9H3S3 457 aa12.14□□□□□ -0.47
SMCO4-204ENST00000527149 TMEM167BQ9NRX6 74 aa12.14□□□□□ -0.47
SMCO4-204ENST00000527149 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
SMCO4-204ENST00000527149 SULT1A2P50226 295 aa12.13□□□□□ -0.47
SMCO4-204ENST00000527149 EIF5AL1Q6IS14 154 aaKnown RBP12.13□□□□□ -0.47
SMCO4-204ENST00000527149 RCHY1Q96PM5 261 aa12.13□□□□□ -0.47
SMCO4-204ENST00000527149 IGKV2-40A0A087WW87 121 aaPredicted RBP12.12□□□□□ -0.47
SMCO4-204ENST00000527149 GGTLC3B5MD39 225 aa12.12□□□□□ -0.47
SMCO4-204ENST00000527149 IGKV2D-40P01614 121 aaPredicted RBP12.12□□□□□ -0.47
SMCO4-204ENST00000527149 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
SMCO4-204ENST00000527149 ZMAT4Q9H898 229 aa12.12□□□□□ -0.47
SMCO4-204ENST00000527149 U3KQK5 164 aa12.12□□□□□ -0.47
SMCO4-204ENST00000527149 CRXO43186 299 aaPredicted RBP12.11□□□□□ -0.47
SMCO4-204ENST00000527149 RAB5CP51148 216 aa12.11□□□□□ -0.47
SMCO4-204ENST00000527149 FXYD7P58549 80 aa12.11□□□□□ -0.47
SMCO4-204ENST00000527149 OR10J6PQ8NGY7 276 aa12.11□□□□□ -0.47
SMCO4-204ENST00000527149 XCL2Q9UBD3 114 aa12.11□□□□□ -0.47
SMCO4-204ENST00000527149 YTHDF2Q9Y5A9 579 aaKnown RBP12.11□□□□□ -0.47
SMCO4-204ENST00000527149 A0A1W2PRE2 83 aa12.1□□□□□ -0.47
SMCO4-204ENST00000527149 M0R2Z0 102 aa12.1□□□□□ -0.47
SMCO4-204ENST00000527149 SPRY2O43597 315 aa12.1□□□□□ -0.47
SMCO4-204ENST00000527149 CT45A10P0DMU9 189 aa12.1□□□□□ -0.47
SMCO4-204ENST00000527149 NUTF2P61970 127 aaKnown RBP12.1□□□□□ -0.47
SMCO4-204ENST00000527149 C9orf47Q6ZRZ4 202 aa12.1□□□□□ -0.47
SMCO4-204ENST00000527149 IQCF2Q8IXL9 164 aa12.1□□□□□ -0.47
SMCO4-204ENST00000527149 ARL6IP6Q8N6S5 226 aa12.1□□□□□ -0.47
SMCO4-204ENST00000527149 SFT2D1Q8WV19 159 aa12.1□□□□□ -0.47
SMCO4-204ENST00000527149 ODF3Q96PU9 254 aa12.1□□□□□ -0.47
SMCO4-204ENST00000527149 VGLL1Q99990 258 aa12.1□□□□□ -0.47
SMCO4-204ENST00000527149 TRAV1-1A0A0B4J248 108 aa12.09□□□□□ -0.47
SMCO4-204ENST00000527149 PGPA6NDG6 321 aa12.09□□□□□ -0.47
SMCO4-204ENST00000527149 DIRC3C9JPN6 131 aa12.09□□□□□ -0.47
SMCO4-204ENST00000527149 ERCC8Q13216 396 aa12.09□□□□□ -0.47
SMCO4-204ENST00000527149 SPINK13Q1W4C9 94 aa12.09□□□□□ -0.47
SMCO4-204ENST00000527149 ALKAL2Q6UX46 152 aa12.09□□□□□ -0.47
SMCO4-204ENST00000527149 FAM19A4Q96LR4 140 aa12.09□□□□□ -0.47
SMCO4-204ENST00000527149 C1QTNF4Q9BXJ3 329 aa12.09□□□□□ -0.47
SMCO4-204ENST00000527149 AGPAT4-IT1Q9H0P7 198 aa12.09□□□□□ -0.47
SMCO4-204ENST00000527149 FAM74A7A6NL05 159 aa12.08□□□□□ -0.48
SMCO4-204ENST00000527149 ZNF705EA8MWA4 302 aaPredicted RBP12.08□□□□□ -0.48
SMCO4-204ENST00000527149 H2AFB1P0C5Y9 115 aa12.08□□□□□ -0.48
SMCO4-204ENST00000527149 GNG5P63218 68 aa12.08□□□□□ -0.48
SMCO4-204ENST00000527149 KIR3DS1Q14943 382 aa12.08□□□□□ -0.48
SMCO4-204ENST00000527149 C5orf17Q8NAS9 161 aa12.08□□□□□ -0.48
SMCO4-204ENST00000527149 RXFP4Q8TDU9 374 aa12.08□□□□□ -0.48
SMCO4-204ENST00000527149 ARL2-SNX15V9GYD0 113 aa12.08□□□□□ -0.48
SMCO4-204ENST00000527149 RBAKDNA6NC62 111 aa12.07□□□□□ -0.48
SMCO4-204ENST00000527149 SLC25A5P05141 298 aaKnown RBP12.07□□□□□ -0.48
SMCO4-204ENST00000527149 RBMY1A1P0DJD3 496 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms