RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PIRTP0C851 137 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TRAPPC2P0DI81 140 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TRAPPC2BP0DI82 140 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 HLA-DRB4P13762 266 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 RPL22P35268 128 aaKnown RBP0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 XCL1P47992 114 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 RPS28P62857 69 aaKnown RBP0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 PLGLB1Q02325 96 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF90Q03938 601 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 SPCS2Q15005 226 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 PABPC1L2AQ5JQF8 200 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 SPANXN5Q5MJ07 72 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 FAM27BQ5VT28 67 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 OR2T2Q6IF00 324 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 HAGHLQ6PII5 290 aaPredicted RBP0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 LYZL1Q6UWQ5 148 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 SDIM1Q6ZPB5 146 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 Q6ZUT4 128 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 C3orf56Q8N813 242 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 Q8NAQ8 132 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 C5orf17Q8NAS9 161 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 NUP35Q8NFH5 326 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 OR8B3Q8NGG8 313 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 OTOSQ8NHW6 89 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 MYOZ3Q8TDC0 251 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 C10orf105Q8TEF2 133 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TSKUQ8WUA8 353 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 NAT14Q8WUY8 206 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 SFT2D1Q8WV19 159 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 PPDPFLQ8WWR9 84 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 PP6455Q8WZ26 134 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 RNASE6Q93091 150 aaKnown RBP0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 C14orf144Q96I85 54 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TEX37Q96LM6 180 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 HYLS1Q96M11 299 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 C20orf166-AS1Q96NR2 134 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 AQP10Q96PS8 301 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 PMCHL2Q9BQD1 86 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 TMEM191AQ9H0A3 160 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 NAA60Q9H7X0 242 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 NPVFQ9HCQ7 196 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 XAGE1AQ9HD64 81 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 RPRMQ9NS64 109 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 BET1LQ9NYM9 111 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 SCP2D1Q9UJQ7 156 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 KLK5Q9Y337 293 aaPredicted RBP0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 V9GYS6 101 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 HLA-DRB4X5D2U9 266 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 CPDO75976 1380 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 CAMSAP2Q08AD1 1489 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 BAZ1BQ9UIG0 1483 aaKnown RBP0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 WDR7Q9Y4E6 1490 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 HECW2Q9P2P5 1572 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 OVOS2A0A0J9YW53 1432 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 OVOS2Q6IE36 1432 aa0.64□□□□□ -2.31
ECHDC1-219ENST00000526299 SYNJ1O43426 1573 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CEP164Q9UPV0 1460 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 MED23Q9ULK4 1368 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 TRAV30A0A087WSZ9 112 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 TMSB15BA0A087X1C1 80 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 TRAV10A0A0B4J240 114 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 TRGV4A0A0C4DH28 118 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 IGHV1-18A0A0C4DH31 117 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 A0A0D9SEW6 157 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 TRBV10-2A0A0K0K1G8 114 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 LOC100130705A0A1B0GUX0 176 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 SPAARA0A1B0GVQ0 90 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 A0A1W2PNM2 257 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 C17orf98A8MV24 154 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 MCRIP1C9JLW8 97 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 C19orf84I3L1E1 186 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 M0R2P5 195 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 M0R378 163 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 FXYD1O00168 92 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 GEMIN2O14893 280 aaKnown RBP0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 OR1I1O60431 355 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 ZNF737O75373 536 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 PGLYRP1O75594 196 aaPredicted RBP0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 NDUFB6O95139 128 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CYB5AP00167 134 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 IGKCP01834 107 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 C1QAP02745 245 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 IGKV1-16P04430 117 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 APODP05090 189 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 SCTP09683 121 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 SAA1P0DJI8 122 aaPredicted RBP0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CGB3P0DN86 165 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CGB7P0DN87 165 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CCL3P10147 92 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CYBAP13498 195 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 CD24P25063 80 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 SSR2P43308 183 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 KRTDAPP60985 99 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 FGF12P61328 243 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 UBE2G1P62253 170 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 PSG9Q00887 426 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 DEFA5Q01523 94 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 HSD52Q0P140 79 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 ELOBQ15370 118 aa0.63□□□□□ -2.31
ECHDC1-219ENST00000526299 MORN2Q502X0 79 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms