RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 SNRPCP09234 159 aaKnown RBP12.53□□□□□ -0.4
LMX1B-203ENST00000526117 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
LMX1B-203ENST00000526117 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
LMX1B-203ENST00000526117 ODF3Q96PU9 254 aa12.53□□□□□ -0.4
LMX1B-203ENST00000526117 ARPC5LQ9BPX5 153 aa12.53□□□□□ -0.4
LMX1B-203ENST00000526117 SLC35B3Q9H1N7 401 aa12.53□□□□□ -0.4
LMX1B-203ENST00000526117 SH3BGRL3Q9H299 93 aa12.53□□□□□ -0.4
LMX1B-203ENST00000526117 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
LMX1B-203ENST00000526117 XCL2Q9UBD3 114 aa12.53□□□□□ -0.4
LMX1B-203ENST00000526117 X6R8D5 127 aa12.53□□□□□ -0.4
LMX1B-203ENST00000526117 BOLA2-SMG1P6H3BVE0 249 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 IGKV3-20P01619 116 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 OR10J4P0C629 311 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 STAG3L2P0CL84 134 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 STAG3L3P0CL85 134 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 CDC34P49427 236 aaPredicted RBP12.52□□□□□ -0.41
LMX1B-203ENST00000526117 UBE2L3P68036 154 aaKnown RBP12.52□□□□□ -0.41
LMX1B-203ENST00000526117 HIST1H1AQ02539 215 aaPredicted RBP12.52□□□□□ -0.41
LMX1B-203ENST00000526117 ARL6IP6Q8N6S5 226 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 Q8NAQ8 132 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 OR10J6PQ8NGY7 276 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 SUN5Q8TC36 379 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 BLNKQ8WV28 456 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 IGF2BP2-AS1Q96M15 143 aa12.52□□□□□ -0.41
LMX1B-203ENST00000526117 A0A0J9YWU9 116 aa12.51□□□□□ -0.41
LMX1B-203ENST00000526117 SMIM9A6NGZ8 99 aa12.51□□□□□ -0.41
LMX1B-203ENST00000526117 NPIPB6E9PJ23 425 aa12.51□□□□□ -0.41
LMX1B-203ENST00000526117 FAM122CQ6P4D5 195 aa12.51□□□□□ -0.41
LMX1B-203ENST00000526117 CRXO43186 299 aaPredicted RBP12.5□□□□□ -0.41
LMX1B-203ENST00000526117 BCL2L11O43521 198 aa12.5□□□□□ -0.41
LMX1B-203ENST00000526117 RAB24Q969Q5 203 aa12.5□□□□□ -0.41
LMX1B-203ENST00000526117 PHYHIPLQ96FC7 376 aa12.5□□□□□ -0.41
LMX1B-203ENST00000526117 PRAC2D3DTV9 90 aa12.49□□□□□ -0.41
LMX1B-203ENST00000526117 M0R3E3 92 aa12.49□□□□□ -0.41
LMX1B-203ENST00000526117 C1QBP02746 253 aa12.49□□□□□ -0.41
LMX1B-203ENST00000526117 ICAM4Q14773 271 aa12.49□□□□□ -0.41
LMX1B-203ENST00000526117 EXOC3-AS1Q8N2X6 119 aa12.49□□□□□ -0.41
LMX1B-203ENST00000526117 ACTR3CQ9C0K3 210 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-203ENST00000526117 GOLT1BQ9Y3E0 138 aa12.49□□□□□ -0.41
LMX1B-203ENST00000526117 KANTRA0A1W2PQU2 76 aa12.48□□□□□ -0.41
LMX1B-203ENST00000526117 INSP01308 110 aa12.48□□□□□ -0.41
LMX1B-203ENST00000526117 SLC25A5P05141 298 aaKnown RBP12.48□□□□□ -0.41
LMX1B-203ENST00000526117 TSPOP30536 169 aa12.48□□□□□ -0.41
LMX1B-203ENST00000526117 CDKN1BP46527 198 aa12.48□□□□□ -0.41
LMX1B-203ENST00000526117 SPINK13Q1W4C9 94 aa12.48□□□□□ -0.41
LMX1B-203ENST00000526117 C9orf47Q6ZRZ4 202 aa12.48□□□□□ -0.41
LMX1B-203ENST00000526117 C1orf158Q8N1D5 194 aa12.48□□□□□ -0.41
LMX1B-203ENST00000526117 LINC00477Q96M19 166 aa12.48□□□□□ -0.41
LMX1B-203ENST00000526117 C20orf144Q9BQM9 153 aa12.48□□□□□ -0.41
LMX1B-203ENST00000526117 Q9H3A6 140 aa12.48□□□□□ -0.41
LMX1B-203ENST00000526117 IGHV4-28A0A0C4DH34 117 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 TRBV7-9A0A0J9YWB2 115 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 RBAKDNA6NC62 111 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 M0R2Z0 102 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 CXorf1O96002 111 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 SEC11BP0C7V7 166 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 ARL14EPLP0DKL9 152 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 FXYD7P58549 80 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 EIF5AP63241 154 aaKnown RBP12.47□□□□□ -0.41
LMX1B-203ENST00000526117 CASC10Q5T4H9 136 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 AKAP14Q86UN6 197 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 TMEM256Q8N2U0 113 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 FAM19A4Q96LR4 140 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 HYLS1Q96M11 299 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 CSMD3Q7Z407 3707 aa12.47□□□□□ -0.41
LMX1B-203ENST00000526117 KMT2CQ8NEZ4 4911 aaKnown RBP12.46□□□□□ -0.41
LMX1B-203ENST00000526117 CTXND1A0A1B0GTU2 59 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 TMEM189A5PLL7 270 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 NMBP08949 121 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 RBMY1A1P0DJD3 496 aaKnown RBP12.46□□□□□ -0.41
LMX1B-203ENST00000526117 RBMY1CP0DJD4 496 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 RANP62826 216 aaKnown RBP12.46□□□□□ -0.41
LMX1B-203ENST00000526117 RBMY1FQ15415 496 aaKnown RBP12.46□□□□□ -0.41
LMX1B-203ENST00000526117 AKR1C8PQ5T2L2 129 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 TMUB2Q71RG4 321 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 STOML3Q8TAV4 291 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 RXFP4Q8TDU9 374 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 OTORQ9NRC9 128 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 TMEM167BQ9NRX6 74 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 PPP1R14DQ9NXH3 145 aa12.46□□□□□ -0.41
LMX1B-203ENST00000526117 UMAD1C9J7I0 102 aa12.45□□□□□ -0.42
LMX1B-203ENST00000526117 CT45A10P0DMU9 189 aa12.45□□□□□ -0.42
LMX1B-203ENST00000526117 GCHFRP30047 84 aa12.45□□□□□ -0.42
LMX1B-203ENST00000526117 LEPP41159 167 aa12.45□□□□□ -0.42
LMX1B-203ENST00000526117 CSN1S1P47710 185 aa12.45□□□□□ -0.42
LMX1B-203ENST00000526117 ZNF726P1Q15940 193 aa12.45□□□□□ -0.42
LMX1B-203ENST00000526117 FAM74A1Q5RGS3 127 aa12.45□□□□□ -0.42
LMX1B-203ENST00000526117 CRISP2P16562 243 aa12.44□□□□□ -0.42
LMX1B-203ENST00000526117 SSX7Q7RTT5 188 aa12.44□□□□□ -0.42
LMX1B-203ENST00000526117 BAP18Q8IXM2 172 aa12.44□□□□□ -0.42
LMX1B-203ENST00000526117 ZNF471Q9BX82 626 aaPredicted RBP12.44□□□□□ -0.42
LMX1B-203ENST00000526117 AGPAT4-IT1Q9H0P7 198 aa12.44□□□□□ -0.42
LMX1B-203ENST00000526117 HMGB3O15347 200 aaKnown RBP12.43□□□□□ -0.42
LMX1B-203ENST00000526117 PFDN1O60925 122 aa12.43□□□□□ -0.42
LMX1B-203ENST00000526117 EIF3GO75821 320 aaKnown RBP eCLIP12.43□□□□□ -0.42
LMX1B-203ENST00000526117 HBE1P02100 147 aa12.43□□□□□ -0.42
LMX1B-203ENST00000526117 LGALSLQ3ZCW2 172 aaPredicted RBP12.43□□□□□ -0.42
LMX1B-203ENST00000526117 TMEM78Q5T7P6 136 aa12.43□□□□□ -0.42
LMX1B-203ENST00000526117 DPPA3Q6W0C5 159 aa12.43□□□□□ -0.42
LMX1B-203ENST00000526117 TMED6Q8WW62 240 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms