RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 SLC17A3O00476 420 aa12.81□□□□□ -0.36
CCS-204ENST00000526066 SNRPCP09234 159 aaKnown RBP12.81□□□□□ -0.36
CCS-204ENST00000526066 SNRPD3P62318 126 aaKnown RBP12.81□□□□□ -0.36
CCS-204ENST00000526066 PSG9Q00887 426 aa12.81□□□□□ -0.36
CCS-204ENST00000526066 HAGHQ16775 308 aa12.81□□□□□ -0.36
CCS-204ENST00000526066 IQCF2Q8IXL9 164 aa12.81□□□□□ -0.36
CCS-204ENST00000526066 BLNKQ8WV28 456 aa12.81□□□□□ -0.36
CCS-204ENST00000526066 TRAV8-2A0A0B4J237 113 aa12.8□□□□□ -0.36
CCS-204ENST00000526066 PPT1P50897 306 aa12.8□□□□□ -0.36
CCS-204ENST00000526066 FAM24BQ8N5W8 94 aa12.8□□□□□ -0.36
CCS-204ENST00000526066 LYPD6BQ8NI32 183 aa12.8□□□□□ -0.36
CCS-204ENST00000526066 KRTAP17-1Q9BYP8 105 aa12.8□□□□□ -0.36
CCS-204ENST00000526066 TMPRSS5Q9H3S3 457 aa12.8□□□□□ -0.36
CCS-204ENST00000526066 ARL2-SNX15V9GYD0 113 aa12.8□□□□□ -0.36
CCS-204ENST00000526066 PMS2P11Q13670 270 aa12.79□□□□□ -0.36
CCS-204ENST00000526066 AAMDCQ9H7C9 122 aa12.79□□□□□ -0.36
CCS-204ENST00000526066 PRELID1Q9Y255 219 aa12.79□□□□□ -0.36
CCS-204ENST00000526066 A0A1W2PRE2 83 aa12.78□□□□□ -0.36
CCS-204ENST00000526066 NMBP08949 121 aa12.78□□□□□ -0.36
CCS-204ENST00000526066 ZNF688P0C7X2 276 aa12.78□□□□□ -0.36
CCS-204ENST00000526066 RANP62826 216 aaKnown RBP12.78□□□□□ -0.36
CCS-204ENST00000526066 ODF3L2Q3SX64 289 aa12.78□□□□□ -0.36
CCS-204ENST00000526066 MRPL53Q96EL3 112 aaKnown RBP12.78□□□□□ -0.36
CCS-204ENST00000526066 MAP6D1Q9H9H5 199 aa12.78□□□□□ -0.36
CCS-204ENST00000526066 OTORQ9NRC9 128 aa12.78□□□□□ -0.36
CCS-204ENST00000526066 CSMD3Q7Z407 3707 aa12.77□□□□□ -0.37
CCS-204ENST00000526066 A0A1B0GV50 99 aa12.77□□□□□ -0.37
CCS-204ENST00000526066 OR11H12B2RN74 326 aa12.77□□□□□ -0.37
CCS-204ENST00000526066 CD7P09564 240 aa12.77□□□□□ -0.37
CCS-204ENST00000526066 CD81P60033 236 aa12.77□□□□□ -0.37
CCS-204ENST00000526066 CCL20P78556 96 aa12.77□□□□□ -0.37
CCS-204ENST00000526066 PSG3Q16557 428 aa12.77□□□□□ -0.37
CCS-204ENST00000526066 NKX6-2Q9C056 277 aaPredicted RBP12.77□□□□□ -0.37
CCS-204ENST00000526066 Q9H3A6 140 aa12.77□□□□□ -0.37
CCS-204ENST00000526066 DEFB131AP59861 70 aa12.76□□□□□ -0.37
CCS-204ENST00000526066 RAB14P61106 215 aa12.76□□□□□ -0.37
CCS-204ENST00000526066 ICAM4Q14773 271 aa12.76□□□□□ -0.37
CCS-204ENST00000526066 PSMG4Q5JS54 123 aa12.76□□□□□ -0.37
CCS-204ENST00000526066 IGFL4Q6B9Z1 124 aa12.76□□□□□ -0.37
CCS-204ENST00000526066 RNF182Q8N6D2 247 aa12.76□□□□□ -0.37
CCS-204ENST00000526066 ARL6IP6Q8N6S5 226 aa12.76□□□□□ -0.37
CCS-204ENST00000526066 C20orf173Q96LM9 149 aa12.76□□□□□ -0.37
CCS-204ENST00000526066 LINC00052Q96N35 136 aa12.76□□□□□ -0.37
CCS-204ENST00000526066 MANBALQ9NQG1 85 aa12.76□□□□□ -0.37
CCS-204ENST00000526066 FAM74A7A6NL05 159 aa12.75□□□□□ -0.37
CCS-204ENST00000526066 RGS13O14921 159 aa12.75□□□□□ -0.37
CCS-204ENST00000526066 HLA-DMBP28068 263 aa12.75□□□□□ -0.37
CCS-204ENST00000526066 EXOC3-AS1Q8N2X6 119 aa12.75□□□□□ -0.37
CCS-204ENST00000526066 YTHDF2Q9Y5A9 579 aaKnown RBP12.75□□□□□ -0.37
CCS-204ENST00000526066 PGPA6NDG6 321 aa12.74□□□□□ -0.37
CCS-204ENST00000526066 IFNA1P01562 189 aa12.74□□□□□ -0.37
CCS-204ENST00000526066 TAGLN2P37802 199 aaKnown RBP12.74□□□□□ -0.37
CCS-204ENST00000526066 ZNF738Q8NE65 137 aa12.74□□□□□ -0.37
CCS-204ENST00000526066 RXFP4Q8TDU9 374 aa12.74□□□□□ -0.37
CCS-204ENST00000526066 GNG13Q9P2W3 67 aa12.74□□□□□ -0.37
CCS-204ENST00000526066 STARD9Q9P2P6 4700 aa12.74□□□□□ -0.37
CCS-204ENST00000526066 GGTLC3B5MD39 225 aa12.73□□□□□ -0.37
CCS-204ENST00000526066 M0R3E3 92 aa12.73□□□□□ -0.37
CCS-204ENST00000526066 PAGE4O60829 102 aa12.73□□□□□ -0.37
CCS-204ENST00000526066 UBE2G2P60604 165 aa12.73□□□□□ -0.37
CCS-204ENST00000526066 SUMO1P63165 101 aaKnown RBP12.73□□□□□ -0.37
CCS-204ENST00000526066 CLLU1Q5K131 121 aa12.73□□□□□ -0.37
CCS-204ENST00000526066 FOXI2Q6ZQN5 318 aa12.73□□□□□ -0.37
CCS-204ENST00000526066 C5orf17Q8NAS9 161 aa12.73□□□□□ -0.37
CCS-204ENST00000526066 RPUSD4Q96CM3 377 aaKnown RBP12.73□□□□□ -0.37
CCS-204ENST00000526066 TXNDC17Q9BRA2 123 aa12.73□□□□□ -0.37
CCS-204ENST00000526066 RETNQ9HD89 108 aa12.73□□□□□ -0.37
CCS-204ENST00000526066 CSN1S1P47710 185 aa12.72□□□□□ -0.37
CCS-204ENST00000526066 CST9LP1Q5W188 147 aa12.72□□□□□ -0.37
CCS-204ENST00000526066 CCDC28AQ8IWP9 274 aa12.72□□□□□ -0.37
CCS-204ENST00000526066 CMTM2Q8TAZ6 248 aa12.72□□□□□ -0.37
CCS-204ENST00000526066 PCNPQ8WW12 178 aaKnown RBP12.72□□□□□ -0.37
CCS-204ENST00000526066 TCEAL7Q9BRU2 100 aa12.72□□□□□ -0.37
CCS-204ENST00000526066 SLC25A5P05141 298 aaKnown RBP12.71□□□□□ -0.37
CCS-204ENST00000526066 BCL2P10415 239 aa12.71□□□□□ -0.37
CCS-204ENST00000526066 APRG1Q8IVJ8 170 aa12.71□□□□□ -0.37
CCS-204ENST00000526066 SAV1Q9H4B6 383 aaPredicted RBP12.71□□□□□ -0.37
CCS-204ENST00000526066 A0A0J9YX75 114 aa12.7□□□□□ -0.38
CCS-204ENST00000526066 ZNF705FA8MVS1 300 aaPredicted RBP12.7□□□□□ -0.38
CCS-204ENST00000526066 HLA-DRB4P13762 266 aa12.7□□□□□ -0.38
CCS-204ENST00000526066 EBLN2Q6P2I7 272 aa12.7□□□□□ -0.38
CCS-204ENST00000526066 OR8A1Q8NGG7 326 aa12.7□□□□□ -0.38
CCS-204ENST00000526066 VAX2Q9UIW0 290 aa12.7□□□□□ -0.38
CCS-204ENST00000526066 EPDR1Q9UM22 224 aa12.7□□□□□ -0.38
CCS-204ENST00000526066 HLA-DRB4X5D2U9 266 aa12.7□□□□□ -0.38
CCS-204ENST00000526066 LOC102723971A0A1B0GUV8 181 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 SERTM2A0A1B0GWG4 89 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 DIRC3C9JPN6 131 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 C11orf94C9JXX5 98 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 PRAC2D3DTV9 90 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 DUSP14O95147 198 aaKnown RBP12.69□□□□□ -0.38
CCS-204ENST00000526066 ATP5G3P48201 142 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 ZNF124Q15973 351 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 DEFB125Q8N687 156 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 FAM210AQ96ND0 272 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 CLUHP3Q96NS8 147 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 WFDC10AQ9H1F0 79 aa12.69□□□□□ -0.38
CCS-204ENST00000526066 RBAKDNA6NC62 111 aa12.68□□□□□ -0.38
CCS-204ENST00000526066 RBFOX3A6NFN3 312 aa12.68□□□□□ -0.38
CCS-204ENST00000526066 KNCNA6PVL3 124 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms