RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 DSCR4P56555 118 aaPredicted RBP2.49□□□□□ -2.01
USP47-206ENST00000525367 BLCAPP62952 87 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 EMX2Q04743 252 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 C1orf134Q5TEV5 83 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 C2orf82Q6UX34 121 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 TMEM91Q6ZNR0 172 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 OR5AK2Q8NH90 309 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 CLEC2BQ92478 149 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 CCDC88AQ3V6T2 1871 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 FAM135BQ49AJ0 1406 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 TRPM1Q7Z4N2 1603 aa2.49□□□□□ -2.01
USP47-206ENST00000525367 NUP210LQ5VU65 1888 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 TCRBV4S1A1TA0A5B7 111 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 E7EUB6 86 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 GNG7O60262 68 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 SLC25A4P12235 298 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 ZNF93P35789 620 aaPredicted RBP2.48□□□□□ -2.01
USP47-206ENST00000525367 DIAPH2-AS1Q14236 149 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 GLIPR1L1Q6UWM5 242 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 TEN1Q86WV5 123 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 TMEM203Q969S6 136 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 FKBP11Q9NYL4 201 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 COMMD3Q9UBI1 195 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 SMARCA4P51532 1647 aa2.48□□□□□ -2.01
USP47-206ENST00000525367 IBTKQ9P2D0 1353 aaPredicted RBP2.48□□□□□ -2.01
USP47-206ENST00000525367 SHANK1Q9Y566 2161 aa2.47□□□□□ -2.01
USP47-206ENST00000525367 NUP98P52948 1817 aa2.47□□□□□ -2.01
USP47-206ENST00000525367 PNMA8CA0A1B0GUJ8 204 aa2.47□□□□□ -2.01
USP47-206ENST00000525367 MIF4GDA9UHW6 222 aaKnown RBP2.47□□□□□ -2.01
USP47-206ENST00000525367 BRS3P32247 399 aa2.47□□□□□ -2.01
USP47-206ENST00000525367 ETV6P41212 452 aa2.47□□□□□ -2.01
USP47-206ENST00000525367 GUCA1AP43080 201 aaPredicted RBP2.47□□□□□ -2.01
USP47-206ENST00000525367 PCBD1P61457 104 aa2.47□□□□□ -2.01
USP47-206ENST00000525367 SNRPD3P62318 126 aaKnown RBP2.47□□□□□ -2.01
USP47-206ENST00000525367 DEFB113Q30KQ7 82 aa2.47□□□□□ -2.01
USP47-206ENST00000525367 RPS19BP1Q86WX3 136 aaKnown RBP2.47□□□□□ -2.01
USP47-206ENST00000525367 EML6Q6ZMW3 1958 aa2.47□□□□□ -2.01
USP47-206ENST00000525367 SHROOM3Q8TF72 1996 aa2.47□□□□□ -2.01
USP47-206ENST00000525367 HEATR5AQ86XA9 2040 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 KDM6AO15550 1401 aaPredicted RBP2.46□□□□□ -2.02
USP47-206ENST00000525367 PRG4Q92954 1404 aaPredicted RBP2.46□□□□□ -2.02
USP47-206ENST00000525367 TRAV14DV4A0A0A6YYC5 116 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 TRAV10A0A0B4J240 114 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 B4DSR2 109 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 F8W036 122 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 YPEL1O60688 119 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 ERC2-IT1O76042 136 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 RBP4P02753 201 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 CKS2P33552 79 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 TPRXLQ17RH7 258 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 Q1T7F1 81 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 ARPINQ7Z6K5 226 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 C10orf111Q8N326 155 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 ZNF431Q8TF32 576 aaPredicted RBP2.46□□□□□ -2.02
USP47-206ENST00000525367 TXNDC17Q9BRA2 123 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 TTTY12Q9BZ98 90 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 CST11Q9H112 138 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 METTL1Q9UBP6 276 aaKnown RBP2.46□□□□□ -2.02
USP47-206ENST00000525367 CUL9Q8IWT3 2517 aa2.46□□□□□ -2.02
USP47-206ENST00000525367 SCN8AQ9UQD0 1980 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 A0A087WSZ3 146 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 C2orf70A6NJV1 201 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 ZNF670-ZNF695F2Z2N8 137 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 CCL4P13236 92 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 PDE6HQ13956 83 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 CLECL1Q8IZS7 167 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 C4orf3Q8WVX3 66 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 NABP2Q9BQ15 211 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 TMEM191AQ9H0A3 160 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 N4BP2Q86UW6 1770 aaPredicted RBP2.45□□□□□ -2.02
USP47-206ENST00000525367 ROCK2O75116 1388 aaKnown RBP2.45□□□□□ -2.02
USP47-206ENST00000525367 SBF1O95248 1867 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 PXDNLA1KZ92 1463 aa2.45□□□□□ -2.02
USP47-206ENST00000525367 VIRMAQ69YN4 1812 aaKnown RBP2.45□□□□□ -2.02
USP47-206ENST00000525367 FRMPD1Q5SYB0 1578 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 FER1L6Q2WGJ9 1857 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 CPAMD8Q8IZJ3 1885 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 MYH10P35580 1976 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 FAM236AA0A1B0GUQ0 79 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 FAM236BA0A1B0GV22 79 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 CDC42EP2O14613 210 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 IFNGP01579 166 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 KRTAP10-1P60331 282 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 ASB16-AS1Q495Z4 193 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 IZUMO2Q6UXV1 221 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 ATOH7Q8N100 152 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 OR5AS1Q8N127 324 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 Q96M85 177 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 GGACTQ9BVM4 153 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 SAR1AQ9NR31 198 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 CCDC167Q9P0B6 97 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 DNAJC15Q9Y5T4 150 aa2.44□□□□□ -2.02
USP47-206ENST00000525367 ANKRD31Q8N7Z5 1873 aa2.43□□□□□ -2.02
USP47-206ENST00000525367 SMG6Q86US8 1419 aaKnown RBP2.43□□□□□ -2.02
USP47-206ENST00000525367 ARHGAP32A7KAX9 2087 aa2.43□□□□□ -2.02
USP47-206ENST00000525367 TAF1LQ8IZX4 1826 aa2.43□□□□□ -2.02
USP47-206ENST00000525367 IGKV4-1P06312 121 aa2.43□□□□□ -2.02
USP47-206ENST00000525367 S100PP25815 95 aa2.43□□□□□ -2.02
USP47-206ENST00000525367 KIAA2026Q5HYC2 2103 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms