RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 C20orf173Q96LM9 149 aa11.84□□□□□ -0.51
TSPAN4-213ENST00000524895 MED9Q9NWA0 146 aa11.84□□□□□ -0.51
TSPAN4-213ENST00000524895 GNG5P63218 68 aa11.83□□□□□ -0.52
TSPAN4-213ENST00000524895 BEAN1Q3B7T3 259 aa11.83□□□□□ -0.52
TSPAN4-213ENST00000524895 COMMD7Q86VX2 200 aa11.83□□□□□ -0.52
TSPAN4-213ENST00000524895 RPUSD4Q96CM3 377 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-213ENST00000524895 TCEAL7Q9BRU2 100 aa11.83□□□□□ -0.52
TSPAN4-213ENST00000524895 MAP6D1Q9H9H5 199 aa11.83□□□□□ -0.52
TSPAN4-213ENST00000524895 RAB19A4D1S5 217 aa11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 LINC00862A6NCI5 91 aa11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 ZNF705FA8MVS1 300 aaPredicted RBP11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 PDE6DO43924 150 aa11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 CMC4P56277 68 aaPredicted RBP11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 DEFB131AP59861 70 aa11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 CD81P60033 236 aa11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 PEA15Q15121 130 aa11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 GTSCR1Q86UQ5 136 aa11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 CCDC28AQ8IWP9 274 aa11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 ZMAT5Q9UDW3 170 aaKnown RBP11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 EPDR1Q9UM22 224 aa11.82□□□□□ -0.52
TSPAN4-213ENST00000524895 PKD1L1Q8TDX9 2849 aa11.81□□□□□ -0.52
TSPAN4-213ENST00000524895 OR11H12B2RN74 326 aa11.81□□□□□ -0.52
TSPAN4-213ENST00000524895 F6UZH7 168 aa11.81□□□□□ -0.52
TSPAN4-213ENST00000524895 PEX7O00628 323 aa11.81□□□□□ -0.52
TSPAN4-213ENST00000524895 PRB4P10163 310 aaPredicted RBP11.81□□□□□ -0.52
TSPAN4-213ENST00000524895 ODF3L2Q3SX64 289 aa11.81□□□□□ -0.52
TSPAN4-213ENST00000524895 ATG101Q9BSB4 218 aa11.81□□□□□ -0.52
TSPAN4-213ENST00000524895 SCO2A0A1W2PP80 73 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 DIRC3C9JPN6 131 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 G3V4G9 280 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 TCRAP04437 139 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 CD7P09564 240 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 SRSF3P84103 164 aaKnown RBP11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 GOLT1AQ6ZVE7 132 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 ARL6IP6Q8N6S5 226 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 CYB561D1Q8N8Q1 229 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 HIST1H2BAQ96A08 127 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 SMDT1Q9H4I9 107 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 TREM1Q9NP99 234 aa11.8□□□□□ -0.52
TSPAN4-213ENST00000524895 IGKV2-40A0A087WW87 121 aaPredicted RBP11.79□□□□□ -0.52
TSPAN4-213ENST00000524895 SERTM2A0A1B0GWG4 89 aa11.79□□□□□ -0.52
TSPAN4-213ENST00000524895 PRAC2D3DTV9 90 aa11.79□□□□□ -0.52
TSPAN4-213ENST00000524895 K7EQM0 130 aa11.79□□□□□ -0.52
TSPAN4-213ENST00000524895 IGKV2D-40P01614 121 aaPredicted RBP11.79□□□□□ -0.52
TSPAN4-213ENST00000524895 DEFB1P60022 68 aa11.79□□□□□ -0.52
TSPAN4-213ENST00000524895 SAMD5Q5TGI4 173 aa11.79□□□□□ -0.52
TSPAN4-213ENST00000524895 EBLN2Q6P2I7 272 aa11.79□□□□□ -0.52
TSPAN4-213ENST00000524895 FAM110AQ9BQ89 295 aa11.79□□□□□ -0.52
TSPAN4-213ENST00000524895 F6UB75 175 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 TMEM250H0YL14 139 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 AKR1C3P42330 323 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 CEBPGP53567 150 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 HIST1H1AQ02539 215 aaPredicted RBP11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 EGFEM1PQ0D2K5 195 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 UQCC3Q6UW78 93 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 FOXI2Q6ZQN5 318 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 APRG1Q8IVJ8 170 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 OR8A1Q8NGG7 326 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 OR10J6PQ8NGY7 276 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 C11orf52Q96A22 123 aa11.78□□□□□ -0.52
TSPAN4-213ENST00000524895 NDUFS6O75380 124 aaKnown RBP11.77□□□□□ -0.53
TSPAN4-213ENST00000524895 SRP19P09132 144 aaKnown RBP11.77□□□□□ -0.53
TSPAN4-213ENST00000524895 CNN1P51911 297 aaKnown RBP11.77□□□□□ -0.53
TSPAN4-213ENST00000524895 ACTL10Q5JWF8 245 aa11.77□□□□□ -0.53
TSPAN4-213ENST00000524895 PRR25Q96S07 402 aa11.77□□□□□ -0.53
TSPAN4-213ENST00000524895 SAV1Q9H4B6 383 aaPredicted RBP11.77□□□□□ -0.53
TSPAN4-213ENST00000524895 A0A0J9YX75 114 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 RBAKDNA6NC62 111 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 KNCNA6PVL3 124 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 C9JQL5 133 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 ZNF705DP0CH99 300 aaPredicted RBP11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 ZNF705BP0CI00 300 aaPredicted RBP11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 KRTAP10-11P60412 298 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 UBE2G1P62253 170 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 ZNF124Q15973 351 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 NDUFA5Q16718 116 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 TMEM78Q5T7P6 136 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 GDF5OSQ5U4N7 250 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 EIF4E3Q8N5X7 224 aaKnown RBP11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 TMEM75Q8N9X5 138 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 C2CD4CQ8TF44 421 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 WFDC10AQ9H1F0 79 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 SLC35B3Q9H1N7 401 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 NOTCH3Q9UM47 2321 aa11.76□□□□□ -0.53
TSPAN4-213ENST00000524895 TRAV8-1A0A0A6YYK1 113 aa11.75□□□□□ -0.53
TSPAN4-213ENST00000524895 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
TSPAN4-213ENST00000524895 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
TSPAN4-213ENST00000524895 ERCC8Q13216 396 aa11.75□□□□□ -0.53
TSPAN4-213ENST00000524895 FMC1Q96HJ9 113 aa11.75□□□□□ -0.53
TSPAN4-213ENST00000524895 LINC00479Q96M42 142 aa11.75□□□□□ -0.53
TSPAN4-213ENST00000524895 VGLL1Q99990 258 aa11.75□□□□□ -0.53
TSPAN4-213ENST00000524895 C19orf73Q9NVV2 129 aa11.75□□□□□ -0.53
TSPAN4-213ENST00000524895 CMYA5Q8N3K9 4069 aa11.75□□□□□ -0.53
TSPAN4-213ENST00000524895 TRAV34A0A0B4J273 112 aa11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 FBLL1A6NHQ2 334 aaKnown RBP11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 S100A9P06702 114 aaKnown RBP11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 SFTA3P0C7M3 94 aa11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 HLA-DRB4P13762 266 aa11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 RPL35P42766 123 aaKnown RBP11.74□□□□□ -0.53
TSPAN4-213ENST00000524895 ZNF674Q2M3X9 581 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms