RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 LY6HO94772 140 aa10.36□□□□□ -0.75
CAPN1-202ENST00000524773 TWIST1Q15672 202 aa10.36□□□□□ -0.75
CAPN1-202ENST00000524773 AKAP6Q13023 2319 aa10.36□□□□□ -0.75
CAPN1-202ENST00000524773 A1L4Q6 167 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 C9orf118A6NHY6 69 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 I3L2K1 104 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 GCSHP23434 173 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 DLX6P56179 175 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 PSG3Q16557 428 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 OR1N2Q8NGR9 330 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 RALYQ9UKM9 306 aaKnown RBP10.35□□□□□ -0.75
CAPN1-202ENST00000524773 CEP295Q9C0D2 2601 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 SPTBN1Q01082 2364 aaKnown RBP10.35□□□□□ -0.75
CAPN1-202ENST00000524773 IGHV1-3A0A0C4DH29 117 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 SH2D1AO60880 128 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 ZNF80P51504 273 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-202ENST00000524773 C1orf185Q5T7R7 199 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 UFSP1Q6NVU6 142 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 SMIM12Q96EX1 92 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 ZNF414Q96IQ9 312 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 APOBEC3AP31941 199 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-202ENST00000524773 CKS2P33552 79 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 RPL24P83731 157 aaKnown RBP10.35□□□□□ -0.75
CAPN1-202ENST00000524773 TMEM108Q6UXF1 575 aa10.35□□□□□ -0.75
CAPN1-202ENST00000524773 TMEM189A5PLL7 270 aa10.34□□□□□ -0.75
CAPN1-202ENST00000524773 SMAD7O15105 426 aaKnown RBP10.34□□□□□ -0.75
CAPN1-202ENST00000524773 TMEM155Q4W5P6 130 aa10.34□□□□□ -0.75
CAPN1-202ENST00000524773 OR2K2Q8NGT1 345 aa10.34□□□□□ -0.75
CAPN1-202ENST00000524773 SPCS1Q9Y6A9 102 aa10.34□□□□□ -0.75
CAPN1-202ENST00000524773 VPS13CQ709C8 3753 aa10.34□□□□□ -0.75
CAPN1-202ENST00000524773 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
CAPN1-202ENST00000524773 K7EIM0 57 aa10.34□□□□□ -0.75
CAPN1-202ENST00000524773 EGR2P11161 476 aaPredicted RBP10.34□□□□□ -0.75
CAPN1-202ENST00000524773 MC5RP33032 325 aa10.34□□□□□ -0.75
CAPN1-202ENST00000524773 LGALS7P47929 136 aa10.34□□□□□ -0.75
CAPN1-202ENST00000524773 DYNLRB1Q9NP97 96 aa10.34□□□□□ -0.75
CAPN1-202ENST00000524773 IGHV3OR16-13A0A075B7E8 117 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 IGHV3-74A0A0B4J1X5 117 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 THBDP07204 575 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 CT45A10P0DMU9 189 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 FXYD2P54710 66 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 BOD1L2Q8IYS8 172 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 ZNF491Q8N8L2 437 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 IFI27L1Q96BM0 104 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 VGLL1Q99990 258 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 TLN1Q9Y490 2541 aaKnown RBP10.33□□□□□ -0.76
CAPN1-202ENST00000524773 NDUFS7O75251 213 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 CEACAM4O75871 244 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 ADAMTSL5Q6ZMM2 481 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 ORMDL3Q8N138 153 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 RNF125Q96EQ8 232 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 SHANK2-AS3Q9BTD1 123 aa10.33□□□□□ -0.76
CAPN1-202ENST00000524773 IGHV3-66A0A0C4DH42 116 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 A0A0G2JNJ9 132 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 CRYGBP07316 175 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 TMEM11P17152 192 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 SEC11AP67812 179 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 LCNL1Q6ZST4 164 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 GTSCR1Q86UQ5 136 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 ABHD17AQ96GS6 310 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 SCNM1Q9BWG6 230 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 Q9UFV3 132 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 K7EP34 96 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 HOXB4P17483 251 aaPredicted RBP10.32□□□□□ -0.76
CAPN1-202ENST00000524773 RPEQ96AT9 228 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 A6NDN8 102 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 SPRY2O43597 315 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 GNG7O60262 68 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 PLP1P60201 277 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 GTF2H5Q6ZYL4 71 aa10.32□□□□□ -0.76
CAPN1-202ENST00000524773 H3BRM9 83 aa10.31□□□□□ -0.76
CAPN1-202ENST00000524773 TIMM23O14925 209 aa10.31□□□□□ -0.76
CAPN1-202ENST00000524773 HBDP02042 147 aa10.31□□□□□ -0.76
CAPN1-202ENST00000524773 ERCC8Q13216 396 aa10.31□□□□□ -0.76
CAPN1-202ENST00000524773 Q6ZQT7 251 aa10.31□□□□□ -0.76
CAPN1-202ENST00000524773 H3BRN7 92 aa10.31□□□□□ -0.76
CAPN1-202ENST00000524773 BUB1B-PAK6H3BSN5 160 aa10.31□□□□□ -0.76
CAPN1-202ENST00000524773 ORM1P02763 201 aa10.31□□□□□ -0.76
CAPN1-202ENST00000524773 KLRD1Q13241 179 aa10.31□□□□□ -0.76
CAPN1-202ENST00000524773 G3V4G9 280 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 C16orf97H3BN30 126 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 HES1Q14469 280 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 LINC00311Q8N616 119 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 RNASE6Q93091 150 aaKnown RBP10.3□□□□□ -0.76
CAPN1-202ENST00000524773 ONECUT1Q9UBC0 465 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 HRNRQ86YZ3 2850 aaPredicted RBP10.3□□□□□ -0.76
CAPN1-202ENST00000524773 A0A1W2PPM0 123 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 K7EQM0 130 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 PRSS1P07477 247 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 LEPP41159 167 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 PAX2Q02962 417 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 RBPJQ06330 500 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 DEFB104AQ8WTQ1 72 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 TMEM14CQ9P0S9 112 aa10.3□□□□□ -0.76
CAPN1-202ENST00000524773 TRAV26-2A0A0B4J265 109 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 WI2-2373I1.2A0A1W2PRP0 233 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 C8orf31Q8N9H6 132 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 IGHV3-49A0A0A0MS15 119 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms