RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 NEU1Q99519 415 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 CYTL1Q9NRR1 136 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 XCL2Q9UBD3 114 aa10.98□□□□□ -0.65
SF3B2-202ENST00000524475 A0A1W2PPV4 95 aa10.97□□□□□ -0.65
SF3B2-202ENST00000524475 IGKV3-20P01619 116 aa10.97□□□□□ -0.65
SF3B2-202ENST00000524475 MIFP14174 115 aa10.97□□□□□ -0.65
SF3B2-202ENST00000524475 ODF3Q96PU9 254 aa10.97□□□□□ -0.65
SF3B2-202ENST00000524475 ARPC5LQ9BPX5 153 aa10.97□□□□□ -0.65
SF3B2-202ENST00000524475 SLC35B3Q9H1N7 401 aa10.97□□□□□ -0.65
SF3B2-202ENST00000524475 SH3BGRL3Q9H299 93 aa10.97□□□□□ -0.65
SF3B2-202ENST00000524475 AAMDCQ9H7C9 122 aa10.97□□□□□ -0.65
SF3B2-202ENST00000524475 X6R8D5 127 aa10.97□□□□□ -0.65
SF3B2-202ENST00000524475 ZNF705FA8MVS1 300 aaPredicted RBP10.96□□□□□ -0.65
SF3B2-202ENST00000524475 BOLA2-SMG1P6H3BVE0 249 aa10.96□□□□□ -0.65
SF3B2-202ENST00000524475 ZNF705DP0CH99 300 aaPredicted RBP10.96□□□□□ -0.65
SF3B2-202ENST00000524475 ZNF705BP0CI00 300 aaPredicted RBP10.96□□□□□ -0.65
SF3B2-202ENST00000524475 STAG3L2P0CL84 134 aa10.96□□□□□ -0.65
SF3B2-202ENST00000524475 STAG3L3P0CL85 134 aa10.96□□□□□ -0.65
SF3B2-202ENST00000524475 CDC34P49427 236 aaPredicted RBP10.96□□□□□ -0.65
SF3B2-202ENST00000524475 UBE2L3P68036 154 aaKnown RBP10.96□□□□□ -0.65
SF3B2-202ENST00000524475 HIST1H1AQ02539 215 aaPredicted RBP10.96□□□□□ -0.65
SF3B2-202ENST00000524475 Q8NAQ8 132 aa10.96□□□□□ -0.65
SF3B2-202ENST00000524475 OR10J6PQ8NGY7 276 aa10.96□□□□□ -0.65
SF3B2-202ENST00000524475 BLNKQ8WV28 456 aa10.96□□□□□ -0.65
SF3B2-202ENST00000524475 IGF2BP2-AS1Q96M15 143 aa10.96□□□□□ -0.65
SF3B2-202ENST00000524475 A0A0J9YWU9 116 aa10.95□□□□□ -0.66
SF3B2-202ENST00000524475 NPIPB6E9PJ23 425 aa10.95□□□□□ -0.66
SF3B2-202ENST00000524475 OR10J4P0C629 311 aa10.95□□□□□ -0.66
SF3B2-202ENST00000524475 FAM122CQ6P4D5 195 aa10.95□□□□□ -0.66
SF3B2-202ENST00000524475 ARL6IP6Q8N6S5 226 aa10.95□□□□□ -0.66
SF3B2-202ENST00000524475 SUN5Q8TC36 379 aa10.95□□□□□ -0.66
SF3B2-202ENST00000524475 PHYHIPLQ96FC7 376 aa10.95□□□□□ -0.66
SF3B2-202ENST00000524475 KMT2CQ8NEZ4 4911 aaKnown RBP10.94□□□□□ -0.66
SF3B2-202ENST00000524475 SMIM9A6NGZ8 99 aa10.94□□□□□ -0.66
SF3B2-202ENST00000524475 PRAC2D3DTV9 90 aa10.94□□□□□ -0.66
SF3B2-202ENST00000524475 M0R3E3 92 aa10.94□□□□□ -0.66
SF3B2-202ENST00000524475 CRXO43186 299 aaPredicted RBP10.94□□□□□ -0.66
SF3B2-202ENST00000524475 BCL2L11O43521 198 aa10.94□□□□□ -0.66
SF3B2-202ENST00000524475 RAB24Q969Q5 203 aa10.94□□□□□ -0.66
SF3B2-202ENST00000524475 GOLT1BQ9Y3E0 138 aa10.94□□□□□ -0.66
SF3B2-202ENST00000524475 KANTRA0A1W2PQU2 76 aa10.93□□□□□ -0.66
SF3B2-202ENST00000524475 INSP01308 110 aa10.93□□□□□ -0.66
SF3B2-202ENST00000524475 C1QBP02746 253 aa10.93□□□□□ -0.66
SF3B2-202ENST00000524475 CDKN1BP46527 198 aa10.93□□□□□ -0.66
SF3B2-202ENST00000524475 FXYD7P58549 80 aa10.93□□□□□ -0.66
SF3B2-202ENST00000524475 ICAM4Q14773 271 aa10.93□□□□□ -0.66
SF3B2-202ENST00000524475 SPINK13Q1W4C9 94 aa10.93□□□□□ -0.66
SF3B2-202ENST00000524475 EXOC3-AS1Q8N2X6 119 aa10.93□□□□□ -0.66
SF3B2-202ENST00000524475 LYSTQ99698 3801 aa10.93□□□□□ -0.66
SF3B2-202ENST00000524475 C20orf144Q9BQM9 153 aa10.93□□□□□ -0.66
SF3B2-202ENST00000524475 ACTR3CQ9C0K3 210 aaPredicted RBP10.93□□□□□ -0.66
SF3B2-202ENST00000524475 PLECQ15149 4684 aaKnown RBP10.93□□□□□ -0.66
SF3B2-202ENST00000524475 IGHV4-28A0A0C4DH34 117 aa10.92□□□□□ -0.66
SF3B2-202ENST00000524475 M0R2Z0 102 aa10.92□□□□□ -0.66
SF3B2-202ENST00000524475 SLC25A5P05141 298 aaKnown RBP10.92□□□□□ -0.66
SF3B2-202ENST00000524475 TSPOP30536 169 aa10.92□□□□□ -0.66
SF3B2-202ENST00000524475 EIF5AP63241 154 aaKnown RBP10.92□□□□□ -0.66
SF3B2-202ENST00000524475 CASC10Q5T4H9 136 aa10.92□□□□□ -0.66
SF3B2-202ENST00000524475 C9orf47Q6ZRZ4 202 aa10.92□□□□□ -0.66
SF3B2-202ENST00000524475 C1orf158Q8N1D5 194 aa10.92□□□□□ -0.66
SF3B2-202ENST00000524475 LINC00477Q96M19 166 aa10.92□□□□□ -0.66
SF3B2-202ENST00000524475 Q9H3A6 140 aa10.92□□□□□ -0.66
SF3B2-202ENST00000524475 TRBV7-9A0A0J9YWB2 115 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 CTXND1A0A1B0GTU2 59 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 RBAKDNA6NC62 111 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 CXorf1O96002 111 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 SEC11BP0C7V7 166 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 ARL14EPLP0DKL9 152 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 RANP62826 216 aaKnown RBP10.91□□□□□ -0.66
SF3B2-202ENST00000524475 AKR1C8PQ5T2L2 129 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 TMUB2Q71RG4 321 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 AKAP14Q86UN6 197 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 TMEM256Q8N2U0 113 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 RXFP4Q8TDU9 374 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 HYLS1Q96M11 299 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 OTORQ9NRC9 128 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 TMEM167BQ9NRX6 74 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 PPP1R14DQ9NXH3 145 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 TENM2Q9NT68 2774 aa10.91□□□□□ -0.66
SF3B2-202ENST00000524475 TMEM189A5PLL7 270 aa10.9□□□□□ -0.66
SF3B2-202ENST00000524475 NMBP08949 121 aa10.9□□□□□ -0.66
SF3B2-202ENST00000524475 RBMY1A1P0DJD3 496 aaKnown RBP10.9□□□□□ -0.66
SF3B2-202ENST00000524475 RBMY1CP0DJD4 496 aa10.9□□□□□ -0.66
SF3B2-202ENST00000524475 CT45A10P0DMU9 189 aa10.9□□□□□ -0.66
SF3B2-202ENST00000524475 LEPP41159 167 aa10.9□□□□□ -0.66
SF3B2-202ENST00000524475 CSN1S1P47710 185 aa10.9□□□□□ -0.66
SF3B2-202ENST00000524475 RBMY1FQ15415 496 aaKnown RBP10.9□□□□□ -0.66
SF3B2-202ENST00000524475 FAM74A1Q5RGS3 127 aa10.9□□□□□ -0.66
SF3B2-202ENST00000524475 STOML3Q8TAV4 291 aa10.9□□□□□ -0.66
SF3B2-202ENST00000524475 FAM19A4Q96LR4 140 aa10.9□□□□□ -0.66
SF3B2-202ENST00000524475 ZNF471Q9BX82 626 aaPredicted RBP10.9□□□□□ -0.66
SF3B2-202ENST00000524475 UMAD1C9J7I0 102 aa10.89□□□□□ -0.67
SF3B2-202ENST00000524475 HMGB3O15347 200 aaKnown RBP10.89□□□□□ -0.67
SF3B2-202ENST00000524475 PFDN1O60925 122 aa10.89□□□□□ -0.67
SF3B2-202ENST00000524475 EIF3GO75821 320 aaKnown RBP eCLIP10.89□□□□□ -0.67
SF3B2-202ENST00000524475 CRISP2P16562 243 aa10.89□□□□□ -0.67
SF3B2-202ENST00000524475 GCHFRP30047 84 aa10.89□□□□□ -0.67
SF3B2-202ENST00000524475 ZNF726P1Q15940 193 aa10.89□□□□□ -0.67
SF3B2-202ENST00000524475 SSX7Q7RTT5 188 aa10.89□□□□□ -0.67
SF3B2-202ENST00000524475 BAP18Q8IXM2 172 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 500.7 ms