RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 SOCS3O14543 225 aa11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 S100A9P06702 114 aaKnown RBP11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 HLA-DMBP28068 263 aa11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 ID1P41134 155 aa11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 UBE2G1P62253 170 aa11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 PAFAH1B2P68402 229 aa11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 TMEM241Q24JQ0 296 aa11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 RBPMS2Q6ZRY4 209 aaKnown RBP11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 TMEM158Q8WZ71 300 aa11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 MRPL53Q96EL3 112 aaKnown RBP11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 MS4A6AQ9H2W1 248 aa11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 SIGLEC8Q9NYZ4 499 aa11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 NAT8Q9UHE5 227 aa11.37□□□□□ -0.59
HMBOX1-210ENST00000523613 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
HMBOX1-210ENST00000523613 TAS2R60P59551 318 aa11.36□□□□□ -0.59
HMBOX1-210ENST00000523613 LCN12Q6JVE5 192 aa11.36□□□□□ -0.59
HMBOX1-210ENST00000523613 WFDC3Q8IUB2 231 aa11.36□□□□□ -0.59
HMBOX1-210ENST00000523613 TVP23CQ96ET8 276 aa11.36□□□□□ -0.59
HMBOX1-210ENST00000523613 FMC1Q96HJ9 113 aa11.36□□□□□ -0.59
HMBOX1-210ENST00000523613 NIPBLQ6KC79 2804 aaeCLIP11.36□□□□□ -0.59
HMBOX1-210ENST00000523613 TRAV34A0A0B4J273 112 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 M0R036 132 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 SNAPINO95295 136 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 TFPI2P48307 235 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 GNG4P50150 75 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 PSG3Q16557 428 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 TMEM183BQ1AE95 376 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 DEFB114Q30KQ6 69 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 DCANP1Q8TF63 244 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 LINC00479Q96M42 142 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 ZNF747Q9BV97 191 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 ZNF705FA8MVS1 300 aaPredicted RBP11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 C9JCJ5 164 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 PNRC1Q12796 327 aaPredicted RBP11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 CENPWQ5EE01 88 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 C12orf54Q6X4T0 127 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 C3orf56Q8N813 242 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 LINC00482Q8N8I6 264 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 SDF2L1Q9HCN8 221 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 KLF12Q9Y4X4 402 aa11.35□□□□□ -0.59
HMBOX1-210ENST00000523613 SAP30O75446 220 aa11.34□□□□□ -0.59
HMBOX1-210ENST00000523613 TMEM61Q8N0U2 210 aa11.34□□□□□ -0.59
HMBOX1-210ENST00000523613 TMEM75Q8N9X5 138 aa11.34□□□□□ -0.59
HMBOX1-210ENST00000523613 CLRN3Q8NCR9 226 aa11.34□□□□□ -0.59
HMBOX1-210ENST00000523613 TRBV20OR9-2A0A075B6H5 130 aa11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 IGKV2-40A0A087WW87 121 aaPredicted RBP11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 K7EQG2 157 aa11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 TSPAN4O14817 238 aa11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 IGKV2D-40P01614 121 aaPredicted RBP11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 SNRPD3P62318 126 aaKnown RBP11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 ADIRFQ15847 76 aa11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 CD300EQ496F6 205 aaPredicted RBP11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 C20orf173Q96LM9 149 aa11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 SGK494Q96LW2 274 aa11.33□□□□□ -0.6
HMBOX1-210ENST00000523613 TRAV2A0A0B4J234 112 aa11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 TRAV25A0A0B4J276 109 aa11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 BAGE2Q86Y30 109 aa11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 IGF2BP2-AS1Q96M15 143 aa11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 LY96Q9Y6Y9 160 aa11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 TRAV8-1A0A0A6YYK1 113 aa11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 RBAKDNA6NC62 111 aa11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 FBLL1A6NHQ2 334 aaKnown RBP11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 RPL23P62829 140 aaKnown RBP11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 FLI1Q01543 452 aaPredicted RBP11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 PRNTQ86SH4 94 aa11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 Q86TA4 180 aa11.32□□□□□ -0.6
HMBOX1-210ENST00000523613 TRBV6-1A0A0K0K1D8 114 aa11.31□□□□□ -0.6
HMBOX1-210ENST00000523613 PGPEP1LA6NFU8 196 aa11.31□□□□□ -0.6
HMBOX1-210ENST00000523613 PRAC2D3DTV9 90 aa11.31□□□□□ -0.6
HMBOX1-210ENST00000523613 IGLV2-11P01706 119 aa11.31□□□□□ -0.6
HMBOX1-210ENST00000523613 ZNF688P0C7X2 276 aa11.31□□□□□ -0.6
HMBOX1-210ENST00000523613 SHISA2Q6UWI4 295 aa11.31□□□□□ -0.6
HMBOX1-210ENST00000523613 LINC01551Q86U37 167 aa11.31□□□□□ -0.6
HMBOX1-210ENST00000523613 OCC1Q8TAD7 63 aa11.31□□□□□ -0.6
HMBOX1-210ENST00000523613 SPAG8Q99932 426 aaPredicted RBP11.31□□□□□ -0.6
HMBOX1-210ENST00000523613 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
HMBOX1-210ENST00000523613 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
HMBOX1-210ENST00000523613 B4DEV8 164 aa11.3□□□□□ -0.6
HMBOX1-210ENST00000523613 LTAP01374 205 aa11.3□□□□□ -0.6
HMBOX1-210ENST00000523613 BTN1A1Q13410 526 aa11.3□□□□□ -0.6
HMBOX1-210ENST00000523613 RHEBQ15382 184 aa11.3□□□□□ -0.6
HMBOX1-210ENST00000523613 PSMG4Q5JS54 123 aa11.3□□□□□ -0.6
HMBOX1-210ENST00000523613 AURKAIP1Q9NWT8 199 aaPredicted RBP11.3□□□□□ -0.6
HMBOX1-210ENST00000523613 MGST1P10620 155 aaKnown RBP11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 FAM24BQ8N5W8 94 aa11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 OR2K2Q8NGT1 345 aa11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 OR10J6PQ8NGY7 276 aa11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 VGLL1Q99990 258 aa11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 ZFP30Q9Y2G7 519 aa11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 C7orf77A4D0Y5 90 aa11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 ERCC8Q13216 396 aa11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 NHLRC2Q8NBF2 726 aa11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 RPS10P5Q9NQ39 176 aa11.29□□□□□ -0.6
HMBOX1-210ENST00000523613 IGLV1-51P01701 117 aa11.28□□□□□ -0.6
HMBOX1-210ENST00000523613 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
HMBOX1-210ENST00000523613 TMEM78Q5T7P6 136 aa11.28□□□□□ -0.6
HMBOX1-210ENST00000523613 WNK1Q9H4A3 2382 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms