RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 HIST1H1EP10412 219 aaKnown RBP12.33□□□□□ -0.44
CCNC-213ENST00000523541 CDKN1BP46527 198 aa12.33□□□□□ -0.44
CCNC-213ENST00000523541 PRELID1Q9Y255 219 aa12.33□□□□□ -0.44
CCNC-213ENST00000523541 TRAV5A0A0B4J249 113 aa12.32□□□□□ -0.44
CCNC-213ENST00000523541 FAM222AQ5U5X8 452 aa12.32□□□□□ -0.44
CCNC-213ENST00000523541 ODF3Q96PU9 254 aa12.32□□□□□ -0.44
CCNC-213ENST00000523541 WDR61Q9GZS3 305 aaKnown RBP12.32□□□□□ -0.44
CCNC-213ENST00000523541 TRBV19A0A075B6N1 114 aa12.31□□□□□ -0.44
CCNC-213ENST00000523541 LYRM9A8MSI8 78 aa12.31□□□□□ -0.44
CCNC-213ENST00000523541 TAS2R60P59551 318 aa12.31□□□□□ -0.44
CCNC-213ENST00000523541 NDUFAF3Q9BU61 184 aa12.31□□□□□ -0.44
CCNC-213ENST00000523541 ZNF586Q9NXT0 402 aa12.31□□□□□ -0.44
CCNC-213ENST00000523541 YTHDF2Q9Y5A9 579 aaKnown RBP12.31□□□□□ -0.44
CCNC-213ENST00000523541 SLC17A3O00476 420 aa12.3□□□□□ -0.44
CCNC-213ENST00000523541 PTTG1O95997 202 aa12.3□□□□□ -0.44
CCNC-213ENST00000523541 HTN3P15516 51 aa12.3□□□□□ -0.44
CCNC-213ENST00000523541 ZNF493Q6ZR52 646 aa12.3□□□□□ -0.44
CCNC-213ENST00000523541 THAP6Q8TBB0 222 aa12.3□□□□□ -0.44
CCNC-213ENST00000523541 LINC01587Q99440 93 aa12.3□□□□□ -0.44
CCNC-213ENST00000523541 ATP5SQ99766 215 aa12.3□□□□□ -0.44
CCNC-213ENST00000523541 MRPL32Q9BYC8 188 aaKnown RBP12.3□□□□□ -0.44
CCNC-213ENST00000523541 TIMM9Q9Y5J7 89 aa12.3□□□□□ -0.44
CCNC-213ENST00000523541 BIRC6Q9NR09 4857 aa12.29□□□□□ -0.44
CCNC-213ENST00000523541 H7BYZ3 331 aa12.29□□□□□ -0.44
CCNC-213ENST00000523541 SNRPCP09234 159 aaKnown RBP12.29□□□□□ -0.44
CCNC-213ENST00000523541 RPL12P30050 165 aaKnown RBP12.29□□□□□ -0.44
CCNC-213ENST00000523541 CLINT1Q14677 625 aa12.29□□□□□ -0.44
CCNC-213ENST00000523541 BAP18Q8IXM2 172 aa12.29□□□□□ -0.44
CCNC-213ENST00000523541 PARD6GQ9BYG4 376 aaPredicted RBP12.29□□□□□ -0.44
CCNC-213ENST00000523541 HSPB11Q9Y547 144 aa12.29□□□□□ -0.44
CCNC-213ENST00000523541 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
CCNC-213ENST00000523541 IFNA5P01569 189 aa12.28□□□□□ -0.44
CCNC-213ENST00000523541 P0DMU3 169 aa12.28□□□□□ -0.44
CCNC-213ENST00000523541 FAM231AP0DMU4 169 aa12.28□□□□□ -0.44
CCNC-213ENST00000523541 FAM231CP0DMU5 169 aa12.28□□□□□ -0.44
CCNC-213ENST00000523541 DAD1P61803 113 aa12.28□□□□□ -0.44
CCNC-213ENST00000523541 SCGB1C1Q8TD33 95 aa12.28□□□□□ -0.44
CCNC-213ENST00000523541 LINC00477Q96M19 166 aa12.28□□□□□ -0.44
CCNC-213ENST00000523541 AAMDCQ9H7C9 122 aa12.28□□□□□ -0.44
CCNC-213ENST00000523541 ZNF705GA8MUZ8 300 aaPredicted RBP12.27□□□□□ -0.45
CCNC-213ENST00000523541 PRAC2D3DTV9 90 aa12.27□□□□□ -0.45
CCNC-213ENST00000523541 NPIPB6E9PJ23 425 aa12.27□□□□□ -0.45
CCNC-213ENST00000523541 H3BTX0 84 aa12.27□□□□□ -0.45
CCNC-213ENST00000523541 NBEAP1P0C6P0 100 aa12.27□□□□□ -0.45
CCNC-213ENST00000523541 PRB4P10163 310 aaPredicted RBP12.27□□□□□ -0.45
CCNC-213ENST00000523541 LEPP41159 167 aa12.27□□□□□ -0.45
CCNC-213ENST00000523541 C16orf74Q96GX8 76 aa12.27□□□□□ -0.45
CCNC-213ENST00000523541 OR51M1Q9H341 326 aa12.27□□□□□ -0.45
CCNC-213ENST00000523541 FUT9Q9Y231 359 aa12.27□□□□□ -0.45
CCNC-213ENST00000523541 DNAH6Q9C0G6 4158 aa12.26□□□□□ -0.45
CCNC-213ENST00000523541 NDUFB4O95168 129 aa12.26□□□□□ -0.45
CCNC-213ENST00000523541 GCSAMLQ5JQS6 135 aa12.26□□□□□ -0.45
CCNC-213ENST00000523541 ASB13Q8WXK3 278 aa12.26□□□□□ -0.45
CCNC-213ENST00000523541 FAM167A-AS1Q96KT0 104 aa12.26□□□□□ -0.45
CCNC-213ENST00000523541 SLC25A2Q9BXI2 301 aa12.26□□□□□ -0.45
CCNC-213ENST00000523541 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
CCNC-213ENST00000523541 NMBP08949 121 aa12.25□□□□□ -0.45
CCNC-213ENST00000523541 CT45A10P0DMU9 189 aa12.25□□□□□ -0.45
CCNC-213ENST00000523541 HTN1P15515 57 aa12.25□□□□□ -0.45
CCNC-213ENST00000523541 UBE2DNLQ8IWF7 75 aa12.25□□□□□ -0.45
CCNC-213ENST00000523541 CCDC28AQ8IWP9 274 aa12.25□□□□□ -0.45
CCNC-213ENST00000523541 LYPD1Q8N2G4 141 aa12.25□□□□□ -0.45
CCNC-213ENST00000523541 TMEM263Q8WUH6 116 aaKnown RBP12.25□□□□□ -0.45
CCNC-213ENST00000523541 MBD2Q9UBB5 411 aa12.25□□□□□ -0.45
CCNC-213ENST00000523541 TIMM8BQ9Y5J9 83 aaPredicted RBP12.25□□□□□ -0.45
CCNC-213ENST00000523541 ALG5Q9Y673 324 aa12.25□□□□□ -0.45
CCNC-213ENST00000523541 SLC25A5P05141 298 aaKnown RBP12.24□□□□□ -0.45
CCNC-213ENST00000523541 PYYP10082 97 aa12.24□□□□□ -0.45
CCNC-213ENST00000523541 AZU1P20160 251 aa12.24□□□□□ -0.45
CCNC-213ENST00000523541 MIR17HGQ75NE6 70 aa12.24□□□□□ -0.45
CCNC-213ENST00000523541 PAXXQ9BUH6 204 aa12.24□□□□□ -0.45
CCNC-213ENST00000523541 PLAC8L1A1L4L8 177 aa12.23□□□□□ -0.45
CCNC-213ENST00000523541 CBY3A6NI87 242 aa12.23□□□□□ -0.45
CCNC-213ENST00000523541 TAS2R45P59539 299 aa12.23□□□□□ -0.45
CCNC-213ENST00000523541 GFI1BQ5VTD9 330 aa12.23□□□□□ -0.45
CCNC-213ENST00000523541 C9orf47Q6ZRZ4 202 aa12.23□□□□□ -0.45
CCNC-213ENST00000523541 POM121L12Q8N7R1 296 aa12.23□□□□□ -0.45
CCNC-213ENST00000523541 RNASE8Q8TDE3 154 aaKnown RBP12.23□□□□□ -0.45
CCNC-213ENST00000523541 BLNKQ8WV28 456 aa12.23□□□□□ -0.45
CCNC-213ENST00000523541 RNF141Q8WVD5 230 aa12.23□□□□□ -0.45
CCNC-213ENST00000523541 PYGO2Q9BRQ0 406 aa12.23□□□□□ -0.45
CCNC-213ENST00000523541 MED28Q9H204 178 aa12.23□□□□□ -0.45
CCNC-213ENST00000523541 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
CCNC-213ENST00000523541 M0R3E3 92 aa12.22□□□□□ -0.45
CCNC-213ENST00000523541 FFAR4Q5NUL3 377 aa12.22□□□□□ -0.45
CCNC-213ENST00000523541 C15orf53Q8NAA6 179 aa12.22□□□□□ -0.45
CCNC-213ENST00000523541 FXYD5Q96DB9 178 aa12.22□□□□□ -0.45
CCNC-213ENST00000523541 FAM19A4Q96LR4 140 aa12.22□□□□□ -0.45
CCNC-213ENST00000523541 DNAH10Q8IVF4 4471 aa12.22□□□□□ -0.45
CCNC-213ENST00000523541 PRM2P04554 102 aa12.21□□□□□ -0.45
CCNC-213ENST00000523541 DEFB130BP0DP73 79 aa12.21□□□□□ -0.45
CCNC-213ENST00000523541 DEFB130AP0DP74 79 aa12.21□□□□□ -0.45
CCNC-213ENST00000523541 CRISP2P16562 243 aa12.21□□□□□ -0.45
CCNC-213ENST00000523541 ICAM4Q14773 271 aa12.21□□□□□ -0.45
CCNC-213ENST00000523541 RNF212Q495C1 297 aa12.21□□□□□ -0.45
CCNC-213ENST00000523541 LINC00467Q9BRT7 94 aa12.21□□□□□ -0.45
CCNC-213ENST00000523541 AGPAT4-IT1Q9H0P7 198 aa12.21□□□□□ -0.45
CCNC-213ENST00000523541 KLLNB2CW77 178 aa12.2□□□□□ -0.46
CCNC-213ENST00000523541 OR7C2O60412 319 aa12.2□□□□□ -0.46
CCNC-213ENST00000523541 ATP5G1P05496 136 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms