RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 MEOX2P50222 304 aa14.21□□□□□ -0.13
TRAPPC9-210ENST00000521667 CT83Q5H943 113 aa14.21□□□□□ -0.13
TRAPPC9-210ENST00000521667 WDR73Q6P4I2 378 aa14.21□□□□□ -0.13
TRAPPC9-210ENST00000521667 GPR61Q9BZJ8 451 aa14.21□□□□□ -0.13
TRAPPC9-210ENST00000521667 IGHV3OR16-13A0A075B7E8 117 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 IGHV3-74A0A0B4J1X5 117 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 PDZD11Q5EBL8 140 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 Q71RC1 249 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 GBGT1Q8N5D6 347 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 OR4X2Q8NGF9 303 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 NEU1Q99519 415 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 CCDC168Q8NDH2 2452 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 TEX15Q9BXT5 2789 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 IGHV3-49A0A0A0MS15 119 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 CHEK1O14757 476 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 MT-ND6P03923 174 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 MRPL54Q6P161 138 aaKnown RBP14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 LCNL1Q6ZST4 164 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 NUP35Q8NFH5 326 aa14.2□□□□□ -0.14
TRAPPC9-210ENST00000521667 NPIPB6E9PJ23 425 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 IGHG4P01861 327 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 S100A12P80511 92 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 IGFL4Q6B9Z1 124 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 ZC2HC1AQ96GY0 325 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 PRDM13Q9H4Q3 707 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 A8MWL6 223 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 SMIM6P0DI80 62 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 S100A2P29034 98 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 CTAG1AP78358 180 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 TMEM136Q6ZRR5 245 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 SLC50A1Q9BRV3 221 aa14.19□□□□□ -0.14
TRAPPC9-210ENST00000521667 IGKV2-40A0A087WW87 121 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC9-210ENST00000521667 FBLL1A6NHQ2 334 aaKnown RBP14.18□□□□□ -0.14
TRAPPC9-210ENST00000521667 HIGD1CA8MV81 97 aa14.18□□□□□ -0.14
TRAPPC9-210ENST00000521667 SMAD7O15105 426 aaKnown RBP14.18□□□□□ -0.14
TRAPPC9-210ENST00000521667 HOXA3O43365 443 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC9-210ENST00000521667 IGKV2D-40P01614 121 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC9-210ENST00000521667 HLA-DMBP28068 263 aa14.18□□□□□ -0.14
TRAPPC9-210ENST00000521667 UNQ9165/PRO28630Q6UXU0 137 aa14.18□□□□□ -0.14
TRAPPC9-210ENST00000521667 OR4B1Q8NGF8 309 aa14.18□□□□□ -0.14
TRAPPC9-210ENST00000521667 ASCL2Q99929 193 aa14.18□□□□□ -0.14
TRAPPC9-210ENST00000521667 PSMB8P28062 276 aa14.17□□□□□ -0.14
TRAPPC9-210ENST00000521667 FAM209BQ5JX69 171 aa14.17□□□□□ -0.14
TRAPPC9-210ENST00000521667 LCN12Q6JVE5 192 aa14.17□□□□□ -0.14
TRAPPC9-210ENST00000521667 RASL11AQ6T310 242 aa14.17□□□□□ -0.14
TRAPPC9-210ENST00000521667 C16orf54Q6UWD8 224 aa14.17□□□□□ -0.14
TRAPPC9-210ENST00000521667 CSPG4Q6UVK1 2322 aa14.17□□□□□ -0.14
TRAPPC9-210ENST00000521667 TMEM89A2RUT3 159 aa14.17□□□□□ -0.14
TRAPPC9-210ENST00000521667 WIPF2Q8TF74 440 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC9-210ENST00000521667 GFRA4Q9GZZ7 299 aa14.17□□□□□ -0.14
TRAPPC9-210ENST00000521667 ZNF705FA8MVS1 300 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC9-210ENST00000521667 RAB4BP61018 213 aa14.16□□□□□ -0.14
TRAPPC9-210ENST00000521667 TCF24Q7RTU0 167 aa14.16□□□□□ -0.14
TRAPPC9-210ENST00000521667 CREBBPQ92793 2442 aa14.16□□□□□ -0.14
TRAPPC9-210ENST00000521667 HLA-DQA1P01909 254 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 GLMPQ8WWB7 406 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 C8orf49Q96NF6 230 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 NPFFR1Q9GZQ6 430 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 FAM231BA6NCW3 169 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 CT45A10P0DMU9 189 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 FABP4P15090 132 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 SAPCD1Q5SSQ6 148 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 ATP5L2Q7Z4Y8 100 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 OR2D3Q8NGH3 330 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 GTSF1Q8WW33 167 aa14.15□□□□□ -0.14
TRAPPC9-210ENST00000521667 CRIP1P50238 77 aa14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 C8orf86Q6ZUL3 223 aa14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 HIST1H2BLQ99880 126 aa14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 VGLL1Q99990 258 aa14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 ZNF702PQ9H963 129 aa14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 PEF1Q9UBV8 284 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 FLNAP21333 2647 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 COX8CQ7Z4L0 72 aa14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 RNF182Q8N6D2 247 aa14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 OR10D4PQ8NGN7 298 aa14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 PRR25Q96S07 402 aa14.14□□□□□ -0.15
TRAPPC9-210ENST00000521667 TRAV8-2A0A0B4J237 113 aa14.13□□□□□ -0.15
TRAPPC9-210ENST00000521667 C10orf99Q6UWK7 81 aa14.13□□□□□ -0.15
TRAPPC9-210ENST00000521667 TEX29Q8N6K0 151 aa14.13□□□□□ -0.15
TRAPPC9-210ENST00000521667 GRIFINA4D1Z8 144 aa14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 CRISP2P16562 243 aa14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 RBPMS2Q6ZRY4 209 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 MRPL53Q96EL3 112 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 FOXC2Q99958 501 aa14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 A0A1B0GXF2 115 aa14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 A0A1W2PS18 150 aa14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 RBAKDNA6NC62 111 aa14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 PRAC2D3DTV9 90 aa14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 Q8TAT8 98 aa14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 PGLYRP4Q96LB8 373 aa14.12□□□□□ -0.15
TRAPPC9-210ENST00000521667 MXRA5Q9NR99 2828 aa14.11□□□□□ -0.15
TRAPPC9-210ENST00000521667 APCSP02743 223 aa14.11□□□□□ -0.15
TRAPPC9-210ENST00000521667 SIGLECL1Q8N7X8 197 aa14.11□□□□□ -0.15
TRAPPC9-210ENST00000521667 PACRGQ96M98 296 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC9-210ENST00000521667 AMBPP02760 352 aa14.1□□□□□ -0.15
TRAPPC9-210ENST00000521667 GZMBP10144 247 aa14.1□□□□□ -0.15
TRAPPC9-210ENST00000521667 GDF5OSQ5U4N7 250 aa14.1□□□□□ -0.15
TRAPPC9-210ENST00000521667 IL17RELQ6ZVW7 336 aa14.1□□□□□ -0.15
TRAPPC9-210ENST00000521667 CLEC5AQ9NY25 188 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms