RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 PSPNO60542 156 aa9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 IGKV2D-40P01614 121 aaPredicted RBP9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 EFNA4P52798 201 aa9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 SCRT2Q9NQ03 307 aa9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 MBD3L4A6NDZ8 208 aaPredicted RBP9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 MBD3L3A6NE82 208 aaPredicted RBP9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 MBD3L5A6NJ08 208 aaPredicted RBP9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 MBD3L2Q8NHZ7 208 aaPredicted RBP9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 MGAMO43451 1857 aa9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 TSC2P49815 1807 aa9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 DOCK6Q96HP0 2047 aa9.84□□□□□ -0.83
ERGIC1-208ENST00000520399 C9orf139Q6ZV77 190 aa9.83□□□□□ -0.84
ERGIC1-208ENST00000520399 VWA8A3KMH1 1905 aa9.83□□□□□ -0.84
ERGIC1-208ENST00000520399 DAD1P61803 113 aa9.83□□□□□ -0.84
ERGIC1-208ENST00000520399 ZC2HC1BQ5TFG8 222 aa9.83□□□□□ -0.84
ERGIC1-208ENST00000520399 CEND1Q8N111 149 aa9.83□□□□□ -0.84
ERGIC1-208ENST00000520399 RNF5Q99942 180 aa9.83□□□□□ -0.84
ERGIC1-208ENST00000520399 ATP5G1P05496 136 aa9.83□□□□□ -0.84
ERGIC1-208ENST00000520399 MINOS1Q5TGZ0 78 aa9.83□□□□□ -0.84
ERGIC1-208ENST00000520399 OR11H6Q8NGC7 330 aa9.83□□□□□ -0.84
ERGIC1-208ENST00000520399 MINOS1-NBL1R4GNA1 71 aa9.83□□□□□ -0.84
ERGIC1-208ENST00000520399 UBE2BP63146 152 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 NMSQ5H8A3 153 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 TRBV25-1A0A075B6N4 114 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 H0YJW9 148 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 DEFB130BP0DP73 79 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 DEFB130AP0DP74 79 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 ZNF138P52744 262 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 SH2D6Q7Z4S9 175 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 TRPT1Q86TN4 253 aaKnown RBP9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 TRBV7-1A0A0A6YYK4 115 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 F5H768 121 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 TCF15Q12870 199 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 UBE2E2Q96LR5 201 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 SRRM4A7MD48 611 aaKnown RBP9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 M0R1W7 72 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 IGKV1-5P01602 117 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 SPATA31B1PQ5VZV4 182 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 WFDC9Q8NEX5 89 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 SCRT1Q9BWW7 348 aa9.82□□□□□ -0.84
ERGIC1-208ENST00000520399 OOSP1A8MZH6 123 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 FOXI1Q12951 378 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 BRK1Q8WUW1 75 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 FAM110AQ9BQ89 295 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 RNF144BQ7Z419 303 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 LYZL1Q6UWQ5 148 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 C20orf204Q6ZNR8 217 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 FOXI2Q6ZQN5 318 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 Q6ZS49 121 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 TRGV9Q99603 122 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 TRAV3A0A0B4J244 114 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 LGALS9BQ3B8N2 356 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 LGALS9CQ6DKI2 356 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 C20orf173Q96LM9 149 aa9.81□□□□□ -0.84
ERGIC1-208ENST00000520399 ARTNQ5T4W7 220 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 TEN1Q86WV5 123 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 SH2D1AO60880 128 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 FHL1Q13642 323 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 A4D1N5 150 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 BUB1B-PAK6H3BSN5 160 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 GNLYP22749 145 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 NDUFV3P56181 108 aaKnown RBP9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 C10orf55Q5SWW7 151 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 TMEM14EPQ6UXP3 125 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 TMEM141Q96I45 108 aa9.8□□□□□ -0.84
ERGIC1-208ENST00000520399 IGKV1D-17A0A075B6S4 117 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 KLHL30-AS1Q8NEE0 82 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 DEFB104AQ8WTQ1 72 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 FAM223BA6NKX1 122 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 M0QXV9 152 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 FAM223AQ8IWN6 122 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 RPP25LQ8N5L8 163 aaKnown RBP9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 LYPD6BQ8NI32 183 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 TMEM158Q8WZ71 300 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 TMEM243Q9BU79 118 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 PFN2P35080 140 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 AMTNQ6UX39 209 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 PYGO2Q9BRQ0 406 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 HGFACQ04756 655 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 SPATA25Q9BR10 227 aa9.79□□□□□ -0.84
ERGIC1-208ENST00000520399 NDUFB1O75438 58 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 RPL15P61313 204 aaKnown RBP9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 C15orf32Q32M92 178 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 LINC00473A8K010 186 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 C12orf74Q32Q52 190 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 Q6ZS92 163 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 USMG5Q96IX5 58 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 NPYP01303 97 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 LCNL1Q6ZST4 164 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 ZNF581Q9P0T4 197 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 C5orf24Q7Z6I8 188 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 C14orf178Q8N769 122 aaPredicted RBP9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 LINC00527Q9UJ94 153 aa9.78□□□□□ -0.84
ERGIC1-208ENST00000520399 MP68P56378 58 aa9.77□□□□□ -0.84
ERGIC1-208ENST00000520399 VWC2Q2TAL6 325 aa9.77□□□□□ -0.84
ERGIC1-208ENST00000520399 TMEM219Q86XT9 240 aa9.77□□□□□ -0.84
ERGIC1-208ENST00000520399 NTN5Q8WTR8 489 aaPredicted RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms