RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 FRMPD1Q5SYB0 1578 aa0.49□□□□□ -2.33
NPM1-206ENST00000519955 RPL35P42766 123 aaKnown RBP0.48□□□□□ -2.33
NPM1-206ENST00000519955 ZNF137PP52743 207 aa0.48□□□□□ -2.33
NPM1-206ENST00000519955 SPINK7P58062 85 aa0.48□□□□□ -2.33
NPM1-206ENST00000519955 FXYD6P3P58550 94 aa0.48□□□□□ -2.33
NPM1-206ENST00000519955 POU6F1Q14863 301 aa0.48□□□□□ -2.33
NPM1-206ENST00000519955 OCIAD2Q56VL3 154 aa0.48□□□□□ -2.33
NPM1-206ENST00000519955 Q6ZQY7 126 aa0.48□□□□□ -2.33
NPM1-206ENST00000519955 CST11Q9H112 138 aa0.48□□□□□ -2.33
NPM1-206ENST00000519955 JPT1Q9UK76 154 aa0.48□□□□□ -2.33
NPM1-206ENST00000519955 MUC4Q99102 2169 aa0.47□□□□□ -2.33
NPM1-206ENST00000519955 EIF3AQ14152 1382 aaKnown RBP0.47□□□□□ -2.33
NPM1-206ENST00000519955 CST7O76096 145 aa0.47□□□□□ -2.33
NPM1-206ENST00000519955 SPINT3P49223 89 aa0.47□□□□□ -2.33
NPM1-206ENST00000519955 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
NPM1-206ENST00000519955 MFSD11O43934 449 aa0.46□□□□□ -2.34
NPM1-206ENST00000519955 CSN2P05814 226 aa0.46□□□□□ -2.34
NPM1-206ENST00000519955 CCL4P13236 92 aa0.46□□□□□ -2.34
NPM1-206ENST00000519955 GNG3P63215 75 aa0.46□□□□□ -2.34
NPM1-206ENST00000519955 RTL8BQ17RB0 113 aa0.46□□□□□ -2.34
NPM1-206ENST00000519955 C6orf52Q5T4I8 152 aa0.46□□□□□ -2.34
NPM1-206ENST00000519955 FKBP1CQ5VVH2 108 aa0.46□□□□□ -2.34
NPM1-206ENST00000519955 NEK7Q8TDX7 302 aa0.46□□□□□ -2.34
NPM1-206ENST00000519955 PLEKHB2Q96CS7 222 aa0.46□□□□□ -2.34
NPM1-206ENST00000519955 FRAS1Q86XX4 4008 aa0.46□□□□□ -2.34
NPM1-206ENST00000519955 ASH1LQ9NR48 2969 aaKnown RBP0.45□□□□□ -2.34
NPM1-206ENST00000519955 FANCMQ8IYD8 2048 aa0.45□□□□□ -2.34
NPM1-206ENST00000519955 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
NPM1-206ENST00000519955 A0A0J9YY99 117 aa0.45□□□□□ -2.34
NPM1-206ENST00000519955 DIAPH2-AS1Q14236 149 aa0.45□□□□□ -2.34
NPM1-206ENST00000519955 CROCCP2Q86T23 111 aa0.45□□□□□ -2.34
NPM1-206ENST00000519955 AP3S1Q92572 193 aa0.45□□□□□ -2.34
NPM1-206ENST00000519955 LAMTOR3Q9UHA4 124 aa0.45□□□□□ -2.34
NPM1-206ENST00000519955 PIK3C2AO00443 1686 aa0.45□□□□□ -2.34
NPM1-206ENST00000519955 N4BP2Q86UW6 1770 aaPredicted RBP0.45□□□□□ -2.34
NPM1-206ENST00000519955 RTL9Q8NET4 1388 aa0.45□□□□□ -2.34
NPM1-206ENST00000519955 KDELR1P24390 212 aa0.44□□□□□ -2.34
NPM1-206ENST00000519955 BASP1P80723 227 aaKnown RBP0.44□□□□□ -2.34
NPM1-206ENST00000519955 VMA21Q3ZAQ7 101 aa0.44□□□□□ -2.34
NPM1-206ENST00000519955 TPRKBQ9Y3C4 175 aa0.44□□□□□ -2.34
NPM1-206ENST00000519955 H3BQV1 296 aa0.43□□□□□ -2.34
NPM1-206ENST00000519955 PIAS1O75925 651 aa0.43□□□□□ -2.34
NPM1-206ENST00000519955 TCTAP57738 103 aa0.43□□□□□ -2.34
NPM1-206ENST00000519955 Q86TA4 180 aa0.43□□□□□ -2.34
NPM1-206ENST00000519955 LINC00269Q8N2A0 174 aa0.43□□□□□ -2.34
NPM1-206ENST00000519955 SMIM20Q8N5G0 67 aa0.43□□□□□ -2.34
NPM1-206ENST00000519955 RMND5BQ96G75 393 aaPredicted RBP0.43□□□□□ -2.34
NPM1-206ENST00000519955 MCEEQ96PE7 176 aa0.43□□□□□ -2.34
NPM1-206ENST00000519955 CCL19Q99731 98 aa0.43□□□□□ -2.34
NPM1-206ENST00000519955 LIMD2Q9BT23 127 aa0.43□□□□□ -2.34
NPM1-206ENST00000519955 MT-ND6P03923 174 aa0.42□□□□□ -2.34
NPM1-206ENST00000519955 PDE6GP18545 87 aa0.42□□□□□ -2.34
NPM1-206ENST00000519955 RPL37AP61513 92 aaKnown RBP0.42□□□□□ -2.34
NPM1-206ENST00000519955 MRPS36P82909 103 aaKnown RBP0.42□□□□□ -2.34
NPM1-206ENST00000519955 LTC4SQ16873 150 aa0.42□□□□□ -2.34
NPM1-206ENST00000519955 OR4C12Q96R67 309 aa0.42□□□□□ -2.34
NPM1-206ENST00000519955 EFCAB11Q9BUY7 163 aa0.42□□□□□ -2.34
NPM1-206ENST00000519955 KIAA1107Q9UPP5 1409 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 KRTAP2-3P0C7H8 128 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 TAS2R41P59536 307 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 ZCCHC23Q6ZST2 131 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 LYG2Q86SG7 212 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 C10orf111Q8N326 155 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 PLAC4Q8WY50 150 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 FAM103A1Q9BTL3 118 aaKnown RBP0.41□□□□□ -2.34
NPM1-206ENST00000519955 KRTAP2-4Q9BYR9 128 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 KRTAP2-1Q9BYU5 128 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 UFC1Q9Y3C8 167 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 ZGRF1Q86YA3 2104 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 NAV3Q8IVL0 2385 aa0.41□□□□□ -2.34
NPM1-206ENST00000519955 A6NN06 94 aa0.4□□□□□ -2.35
NPM1-206ENST00000519955 KPNA4O00629 521 aaPredicted RBP0.4□□□□□ -2.35
NPM1-206ENST00000519955 PRR15Q8IV56 129 aa0.4□□□□□ -2.35
NPM1-206ENST00000519955 STX19Q8N4C7 294 aa0.4□□□□□ -2.35
NPM1-206ENST00000519955 GRPEL2Q8TAA5 225 aa0.4□□□□□ -2.35
NPM1-206ENST00000519955 BORCS8Q96FH0 119 aa0.4□□□□□ -2.35
NPM1-206ENST00000519955 PTPRDP23468 1912 aa0.39□□□□□ -2.35
NPM1-206ENST00000519955 FABP4P15090 132 aa0.39□□□□□ -2.35
NPM1-206ENST00000519955 GLRXP35754 106 aa0.39□□□□□ -2.35
NPM1-206ENST00000519955 CCL4L1Q8NHW4 92 aa0.39□□□□□ -2.35
NPM1-206ENST00000519955 OTORQ9NRC9 128 aa0.39□□□□□ -2.35
NPM1-206ENST00000519955 IL20Q9NYY1 176 aa0.39□□□□□ -2.35
NPM1-206ENST00000519955 MED11Q9P086 117 aa0.39□□□□□ -2.35
NPM1-206ENST00000519955 ADGBQ8N7X0 1667 aa0.39□□□□□ -2.35
NPM1-206ENST00000519955 IGHV3-30P01768 117 aa0.38□□□□□ -2.35
NPM1-206ENST00000519955 IGHV3-30-5P0DP03 117 aa0.38□□□□□ -2.35
NPM1-206ENST00000519955 FAM24BQ8N5W8 94 aa0.38□□□□□ -2.35
NPM1-206ENST00000519955 OR4B1Q8NGF8 309 aa0.38□□□□□ -2.35
NPM1-206ENST00000519955 CARD19Q96LW7 228 aa0.38□□□□□ -2.35
NPM1-206ENST00000519955 BIN3Q9NQY0 253 aa0.38□□□□□ -2.35
NPM1-206ENST00000519955 NAT8BQ9UHF3 227 aa0.38□□□□□ -2.35
NPM1-206ENST00000519955 NUBP2Q9Y5Y2 271 aa0.38□□□□□ -2.35
NPM1-206ENST00000519955 YTHDC2Q9H6S0 1430 aaKnown RBP0.38□□□□□ -2.35
NPM1-206ENST00000519955 CACNA1EQ15878 2313 aa0.37□□□□□ -2.35
NPM1-206ENST00000519955 CASC2Q6XLA1 102 aa0.37□□□□□ -2.35
NPM1-206ENST00000519955 C5orf17Q8NAS9 161 aa0.37□□□□□ -2.35
NPM1-206ENST00000519955 TSKUQ8WUA8 353 aa0.37□□□□□ -2.35
NPM1-206ENST00000519955 DIRC1Q969H9 104 aa0.37□□□□□ -2.35
NPM1-206ENST00000519955 TRAPPC8Q9Y2L5 1435 aa0.37□□□□□ -2.35
NPM1-206ENST00000519955 ZDBF2Q9HCK1 2354 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms