RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 FMC1Q96HJ9 113 aa3.47□□□□□ -1.85
PABPC1-212ENST00000519622 GPR82Q96P67 336 aa3.47□□□□□ -1.85
PABPC1-212ENST00000519622 RBM14Q96PK6 669 aaKnown RBP3.47□□□□□ -1.85
PABPC1-212ENST00000519622 ASCL2Q99929 193 aa3.47□□□□□ -1.85
PABPC1-212ENST00000519622 ALKBH7Q9BT30 221 aaPredicted RBP3.47□□□□□ -1.85
PABPC1-212ENST00000519622 CHRDL1Q9BU40 450 aa3.47□□□□□ -1.85
PABPC1-212ENST00000519622 NDUFAF3Q9BU61 184 aa3.47□□□□□ -1.85
PABPC1-212ENST00000519622 OTORQ9NRC9 128 aa3.47□□□□□ -1.85
PABPC1-212ENST00000519622 C1RLQ9NZP8 487 aa3.47□□□□□ -1.85
PABPC1-212ENST00000519622 HIGD1AQ9Y241 93 aa3.47□□□□□ -1.85
PABPC1-212ENST00000519622 FBN2P35556 2912 aa3.47□□□□□ -1.85
PABPC1-212ENST00000519622 SPTA1P02549 2419 aa3.46□□□□□ -1.85
PABPC1-212ENST00000519622 CENPVL3A0A0U1RRI6 287 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 ZNF705GA8MUZ8 300 aaPredicted RBP3.46□□□□□ -1.86
PABPC1-212ENST00000519622 HIGD1CA8MV81 97 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 M0R3E3 92 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 GATCO43716 136 aaKnown RBP3.46□□□□□ -1.86
PABPC1-212ENST00000519622 SPINK4O60575 86 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 HLA-DQA1P01909 254 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 CTSGP08311 255 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 MGST1P10620 155 aaKnown RBP3.46□□□□□ -1.86
PABPC1-212ENST00000519622 CRISP2P16562 243 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 TMEM11P17152 192 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 HLA-DMBP28068 263 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 SRIP30626 198 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 SAA4P35542 130 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 GPR6P46095 362 aaPredicted RBP3.46□□□□□ -1.86
PABPC1-212ENST00000519622 UBE2E1P51965 193 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 EFNA4P52798 201 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 FOXA3P55318 350 aaPredicted RBP3.46□□□□□ -1.86
PABPC1-212ENST00000519622 RPL19P84098 196 aaKnown RBP3.46□□□□□ -1.86
PABPC1-212ENST00000519622 PAX8Q06710 450 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 OR10J3Q5JRS4 329 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 C1orf194Q5T5A4 169 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 WDR73Q6P4I2 378 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 TMEM75Q8N9X5 138 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 STXBP6Q8NFX7 210 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 PRSS3P2Q8NHM4 247 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 FAM110DQ8TAY7 271 aaPredicted RBP3.46□□□□□ -1.86
PABPC1-212ENST00000519622 ZNF502Q8TBZ5 544 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 BLNKQ8WV28 456 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 TMEM18Q96B42 140 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 KCNS1Q96KK3 526 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 TMEM68Q96MH6 324 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 C20orf144Q9BQM9 153 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 C2orf88Q9BSF0 95 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 BPESC1Q9GZL8 116 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 RPP21Q9H633 154 aaKnown RBP3.46□□□□□ -1.86
PABPC1-212ENST00000519622 NAGKQ9UJ70 344 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 TBL2Q9Y4P3 447 aaKnown RBP3.46□□□□□ -1.86
PABPC1-212ENST00000519622 SOX21Q9Y651 276 aaPredicted RBP3.46□□□□□ -1.86
PABPC1-212ENST00000519622 CSMD1Q96PZ7 3565 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 IGSF10Q6WRI0 2623 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 ABCA1O95477 2261 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 NBASA2RRP1 2371 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 VPS13CQ709C8 3753 aa3.46□□□□□ -1.86
PABPC1-212ENST00000519622 TPRP12270 2363 aaKnown RBP3.45□□□□□ -1.86
PABPC1-212ENST00000519622 ZFHX3Q15911 3703 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 A0A087X0K7 114 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 A0A096LNJ9 63 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 TRAV8-2A0A0B4J237 113 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 IGHV4-61A0A0C4DH41 118 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 C2orf70A6NJV1 201 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 SH2D7A6NKC9 451 aaPredicted RBP3.45□□□□□ -1.86
PABPC1-212ENST00000519622 M0QZ24 198 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 ATP6V0E1O15342 81 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 ZNF324O75467 553 aaPredicted RBP3.45□□□□□ -1.86
PABPC1-212ENST00000519622 IGHV3-23P01764 117 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 IL4P05112 153 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 C3orf79P0CE67 100 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 CEACAM3P40198 252 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 PCP4P48539 62 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 ZNF80P51504 273 aaPredicted RBP3.45□□□□□ -1.86
PABPC1-212ENST00000519622 PSG3Q16557 428 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 COX19Q49B96 90 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 EBLN2Q6P2I7 272 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 LINC00173Q6ZV60 143 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 GOLT1AQ6ZVE7 132 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 ATP5L2Q7Z4Y8 100 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 GPHB5Q86YW7 130 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 LYPD1Q8N2G4 141 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 C5orf56Q8N8D9 126 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 TMEM190Q8WZ59 177 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 RPL36ALQ969Q0 106 aaKnown RBP3.45□□□□□ -1.86
PABPC1-212ENST00000519622 TIMD4Q96H15 378 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 NOL4LQ96MY1 436 aaPredicted RBP3.45□□□□□ -1.86
PABPC1-212ENST00000519622 MS4A10Q96PG2 267 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 RASL11BQ9BPW5 248 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 PIMREGQ9BSJ6 248 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 SNHG12Q9BXW3 62 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 GFRA4Q9GZZ7 299 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 AAMDCQ9H7C9 122 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 UBTD1Q9HAC8 227 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 NRN1Q9NPD7 142 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 NAT8BQ9UHF3 227 aa3.45□□□□□ -1.86
PABPC1-212ENST00000519622 USP9XQ93008 2570 aaPredicted RBP3.45□□□□□ -1.86
PABPC1-212ENST00000519622 ASH1LQ9NR48 2969 aaKnown RBP3.44□□□□□ -1.86
PABPC1-212ENST00000519622 DOPEY1Q5JWR5 2465 aa3.44□□□□□ -1.86
PABPC1-212ENST00000519622 COL6A6A6NMZ7 2263 aa3.44□□□□□ -1.86
PABPC1-212ENST00000519622 AKAP9Q99996 3911 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms