RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 ZNRF2Q8NHG8 242 aa7.62□□□□□ -1.19
PVT1-208ENST00000519481 RNASE8Q8TDE3 154 aaKnown RBP7.62□□□□□ -1.19
PVT1-208ENST00000519481 RNF141Q8WVD5 230 aa7.62□□□□□ -1.19
PVT1-208ENST00000519481 GNPNAT1Q96EK6 184 aaPredicted RBP7.62□□□□□ -1.19
PVT1-208ENST00000519481 PFDN5Q99471 154 aa7.62□□□□□ -1.19
PVT1-208ENST00000519481 MGST2Q99735 147 aa7.62□□□□□ -1.19
PVT1-208ENST00000519481 C20orf85Q9H1P6 137 aa7.62□□□□□ -1.19
PVT1-208ENST00000519481 UQCC1Q9NVA1 299 aa7.62□□□□□ -1.19
PVT1-208ENST00000519481 H3BTX0 84 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 CCSO14618 274 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 M6PRP20645 277 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 OPCMLQ14982 345 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 TTC32Q5I0X7 151 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 GFI1BQ5VTD9 330 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 SSX7Q7RTT5 188 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 NRARPQ7Z6K4 114 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 ZNF575Q86XF7 245 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 TMEM37Q8WXS4 190 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 ODF3Q96PU9 254 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 LINC00588Q9Y4M8 146 aa7.61□□□□□ -1.19
PVT1-208ENST00000519481 DNAH11Q96DT5 4516 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 GAGE12BA1L429 117 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 C16orf90A8MZG2 172 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 J3KRW8 73 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 SLC17A3O00476 420 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 LYRM1O43325 122 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 GAGE7O76087 117 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 CST7O76096 145 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 GAGE12FP0CL80 117 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 GAGE12GP0CL81 117 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 GAGE12IP0CL82 117 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 IGLC2P0DOY2 106 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 HBG1P69891 147 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 HBG2P69892 147 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 TNP2Q05952 138 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 MIC13Q5XKP0 118 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 RXFP4Q8TDU9 374 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 SDHCQ99643 169 aaPredicted RBP7.6□□□□□ -1.19
PVT1-208ENST00000519481 PYGO2Q9BRQ0 406 aa7.6□□□□□ -1.19
PVT1-208ENST00000519481 PARD6GQ9BYG4 376 aaPredicted RBP7.6□□□□□ -1.19
PVT1-208ENST00000519481 PKD1P98161 4303 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 TRAV6A0A075B6T7 132 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 TRAV26-1A0A087WT03 109 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 TRAV12-3A0A0B4J271 114 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 PRAC2D3DTV9 90 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 H3BQ15 152 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 ZNF253O75346 499 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 TCRBP04435 133 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 S100A11P31949 105 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 S100A10P60903 97 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 BAXQ07812 192 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 KIR3DS1Q14943 382 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 LCE2AQ5TA79 106 aaPredicted RBP7.59□□□□□ -1.19
PVT1-208ENST00000519481 MORN5Q5VZ52 161 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 STX12Q86Y82 276 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 ZNF431Q8TF32 576 aaPredicted RBP7.59□□□□□ -1.19
PVT1-208ENST00000519481 MRPL53Q96EL3 112 aaKnown RBP7.59□□□□□ -1.19
PVT1-208ENST00000519481 SAT2Q96F10 170 aaPredicted RBP7.59□□□□□ -1.19
PVT1-208ENST00000519481 ZNF503Q96F45 646 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 C2orf50Q96LR7 162 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 Q9H8V8 135 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 PRELID1Q9Y255 219 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 WDR83OSQ9Y284 106 aa7.59□□□□□ -1.19
PVT1-208ENST00000519481 DYNC1H1Q14204 4646 aaKnown RBP7.59□□□□□ -1.19
PVT1-208ENST00000519481 PCLOQ9Y6V0 5065 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 TRAV5A0A0B4J249 113 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 A0A0J9YY99 117 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 UBE2L5PA0A1B0GUS4 154 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 FAM24AA6NFZ4 105 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 NPIPB6E9PJ23 425 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 H3BNG1 76 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 SLC25A5P05141 298 aaKnown RBP7.58□□□□□ -1.2
PVT1-208ENST00000519481 CT45A10P0DMU9 189 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 RPL29P47914 159 aaKnown RBP7.58□□□□□ -1.2
PVT1-208ENST00000519481 SULT1A1P50225 295 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 ATP6V1FQ16864 119 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 LINC00612Q8N6U2 182 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 ZNF680Q8NEM1 530 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 SEC22CQ9BRL7 303 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 SLC39A9Q9NUM3 307 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 TIMM9Q9Y5J7 89 aa7.58□□□□□ -1.2
PVT1-208ENST00000519481 TRGV2A0A075B6R0 118 aa7.57□□□□□ -1.2
PVT1-208ENST00000519481 C7orf71A4D174 169 aa7.57□□□□□ -1.2
PVT1-208ENST00000519481 PLA2G10O15496 165 aa7.57□□□□□ -1.2
PVT1-208ENST00000519481 H2AFB2P0C5Z0 115 aa7.57□□□□□ -1.2
PVT1-208ENST00000519481 HIST1H1EP10412 219 aaKnown RBP7.57□□□□□ -1.2
PVT1-208ENST00000519481 FGF7P21781 194 aa7.57□□□□□ -1.2
PVT1-208ENST00000519481 DAZ2Q13117 558 aaKnown RBP7.57□□□□□ -1.2
PVT1-208ENST00000519481 LINC00477Q96M19 166 aa7.57□□□□□ -1.2
PVT1-208ENST00000519481 AAMDCQ9H7C9 122 aa7.57□□□□□ -1.2
PVT1-208ENST00000519481 LYRM2Q9NU23 88 aaPredicted RBP7.57□□□□□ -1.2
PVT1-208ENST00000519481 NUDT15Q9NV35 164 aa7.57□□□□□ -1.2
PVT1-208ENST00000519481 ZNF586Q9NXT0 402 aa7.57□□□□□ -1.2
PVT1-208ENST00000519481 TRBV19A0A075B6N1 114 aa7.56□□□□□ -1.2
PVT1-208ENST00000519481 MPDU1O75352 247 aa7.56□□□□□ -1.2
PVT1-208ENST00000519481 PDE6HQ13956 83 aa7.56□□□□□ -1.2
PVT1-208ENST00000519481 VWC2Q2TAL6 325 aa7.56□□□□□ -1.2
PVT1-208ENST00000519481 TMEM252Q8N6L7 170 aa7.56□□□□□ -1.2
PVT1-208ENST00000519481 CHAC2Q8WUX2 184 aa7.56□□□□□ -1.2
PVT1-208ENST00000519481 GPN1Q9HCN4 374 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms