RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 TMEM241Q24JQ0 296 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 DEFB121Q5J5C9 76 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 CST9LP1Q5W188 147 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 UNQ9165/PRO28630Q6UXU0 137 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 ADAMTSL5Q6ZMM2 481 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 SLC50A1Q9BRV3 221 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 TMPRSS5Q9H3S3 457 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 TUBA4BQ9H853 241 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 BIN3Q9NQY0 253 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 PEMTQ9UBM1 199 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 MLXQ9UH92 298 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 SMPXQ9UHP9 88 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 EPDR1Q9UM22 224 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 PCLOQ9Y6V0 5065 aa5.73□□□□□ -1.49
SDCBP-206ENST00000519115 DNAH3Q8TD57 4116 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 A0A087WWC5 75 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 TRAV5A0A0B4J249 113 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 IGHV7-4-1A0A0J9YVY3 117 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 TMEM213A2RRL7 107 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 IZUMO1RA6ND01 250 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 CXorf65A6NEN9 183 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 C2orf70A6NJV1 201 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 C9JQL5 133 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 K7EQM0 130 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 IGLV1-51P01701 117 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 SLC25A5P05141 298 aaKnown RBP5.72□□□□□ -1.49
SDCBP-206ENST00000519115 RHEBQ15382 184 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 TM4SF20Q53R12 229 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 MORN5Q5VZ52 161 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 FAM90A2PQ658T7 463 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 COX8CQ7Z4L0 72 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 CYB561D1Q8N8Q1 229 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 DYNLRB2Q8TF09 96 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 C2CD4CQ8TF44 421 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 GLMPQ8WWB7 406 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 TVP23CQ96ET8 276 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 CTDSP1Q9GZU7 261 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 AAMDCQ9H7C9 122 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 SDF2L1Q9HCN8 221 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 ZNF586Q9NXT0 402 aa5.72□□□□□ -1.49
SDCBP-206ENST00000519115 ZMAT5Q9UDW3 170 aaKnown RBP5.72□□□□□ -1.49
SDCBP-206ENST00000519115 TRAV25A0A0B4J276 109 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 TRBV7-9A0A0J9YWB2 115 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 RBAKDNA6NC62 111 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 H3BQ15 152 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 ZNF207O43670 478 aaKnown RBP5.71□□□□□ -1.5
SDCBP-206ENST00000519115 NDUFB4O95168 129 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 APOC3P02656 99 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 FOLR2P14207 255 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 CSN1S1P47710 185 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 RANP62826 216 aaKnown RBP5.71□□□□□ -1.5
SDCBP-206ENST00000519115 TMEM183BQ1AE95 376 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 CD300EQ496F6 205 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-206ENST00000519115 SIGLEC15Q6ZMC9 328 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 IQCF2Q8IXL9 164 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 LINC00052Q96N35 136 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 SMIM7Q9BQ49 75 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 ATG101Q9BSB4 218 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 C20orf24Q9BUV8 137 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 ZNF331Q9NQX6 463 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-206ENST00000519115 NAT8Q9UHE5 227 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 ZFP30Q9Y2G7 519 aa5.71□□□□□ -1.5
SDCBP-206ENST00000519115 YTHDF2Q9Y5A9 579 aaKnown RBP5.71□□□□□ -1.5
SDCBP-206ENST00000519115 A0A1B0GV50 99 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 PGPA6NDG6 321 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 ZNF727A8MUV8 499 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 GGTLC3B5MD39 225 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 ISLRO14498 428 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 CHEK1O14757 476 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 PPP1R2P9O14990 202 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 OR10J4P0C629 311 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 PYYP10082 97 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 ADCYAP1P18509 176 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 CBLN1P23435 193 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 CNN1P51911 297 aaKnown RBP5.7□□□□□ -1.5
SDCBP-206ENST00000519115 LCN12Q6JVE5 192 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 CMTM2Q8TAZ6 248 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 FMC1Q96HJ9 113 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 IMMP2LQ96T52 175 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 RHPN1-AS1Q9BWJ2 59 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 PARLQ9H300 379 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 Q9H3A6 140 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 LENEPQ9Y5L5 61 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 SMAD5-AS1Q9Y6J3 95 aa5.7□□□□□ -1.5
SDCBP-206ENST00000519115 IGHV3-49A0A0A0MS15 119 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 PEX7O00628 323 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 TSPAN4O14817 238 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 EIF4EBP3O60516 100 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-206ENST00000519115 TCRAP04437 139 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 ID1P41134 155 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 ATP5G3P48201 142 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 CMC4P56277 68 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-206ENST00000519115 UBE2G2P60604 165 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 PAFAH1B2P68402 229 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 TNP2Q05952 138 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 GUCA2BQ16661 112 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 DEFB114Q30KQ6 69 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 SAPCD1Q5SSQ6 148 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 TMEM61Q8N0U2 210 aa5.69□□□□□ -1.5
SDCBP-206ENST00000519115 TMEM75Q8N9X5 138 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms