RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 SYNJ2BPP57105 145 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 FLI1Q01543 452 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 PSG3Q16557 428 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 Q86TA4 180 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 OR11H1Q8NG94 326 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 C16orf92Q96LL3 132 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 IMMP2LQ96T52 175 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 NRN1Q9NPD7 142 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 OSTCQ9NRP0 149 aa11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 AURKAIP1Q9NWT8 199 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC9-205ENST00000518839 RBAKDNA6NC62 111 aa11.45□□□□□ -0.58
TRAPPC9-205ENST00000518839 PROK1P58294 105 aa11.45□□□□□ -0.58
TRAPPC9-205ENST00000518839 ERVFC1-1P60608 527 aa11.45□□□□□ -0.58
TRAPPC9-205ENST00000518839 LCN12Q6JVE5 192 aa11.45□□□□□ -0.58
TRAPPC9-205ENST00000518839 FAM231DQ6ZW35 169 aa11.45□□□□□ -0.58
TRAPPC9-205ENST00000518839 TCF24Q7RTU0 167 aa11.45□□□□□ -0.58
TRAPPC9-205ENST00000518839 TMEM183AQ8IXX5 376 aa11.45□□□□□ -0.58
TRAPPC9-205ENST00000518839 BTF3L4Q96K17 158 aa11.45□□□□□ -0.58
TRAPPC9-205ENST00000518839 PSG8Q9UQ74 426 aa11.45□□□□□ -0.58
TRAPPC9-205ENST00000518839 IGLV2-11P01706 119 aa11.44□□□□□ -0.58
TRAPPC9-205ENST00000518839 CD28P10747 220 aa11.44□□□□□ -0.58
TRAPPC9-205ENST00000518839 RPL11P62913 178 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-205ENST00000518839 KCNIP4Q6PIL6 250 aa11.44□□□□□ -0.58
TRAPPC9-205ENST00000518839 C18orf65Q6ZTR6 163 aa11.44□□□□□ -0.58
TRAPPC9-205ENST00000518839 MLST8Q9BVC4 326 aa11.44□□□□□ -0.58
TRAPPC9-205ENST00000518839 MLXQ9UH92 298 aa11.44□□□□□ -0.58
TRAPPC9-205ENST00000518839 TRAV8-2A0A0B4J237 113 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 C2orf70A6NJV1 201 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 COLCA2A8K830 154 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 HAX1O00165 279 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 CBLN1P23435 193 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 ID1P41134 155 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 SLURP1P55000 103 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 DEFB136Q30KP8 78 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 SAPCD1Q5SSQ6 148 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 PRNTQ86SH4 94 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 ZNF492Q9P255 531 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 ZFHX3Q15911 3703 aa11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 ANK3Q12955 4377 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-205ENST00000518839 OTOGQ6ZRI0 2925 aa11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 SOCS3O14543 225 aa11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 OR5I1Q13606 314 aa11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 ELOBQ15370 118 aa11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 IBA57Q5T440 356 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 FAM24BQ8N5W8 94 aa11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 OR9G4Q8NGQ1 327 aa11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 YPEL4Q96NS1 127 aa11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 CITED2Q99967 270 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 NDFIP1Q9BT67 221 aa11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 MTORP42345 2549 aa11.42□□□□□ -0.58
TRAPPC9-205ENST00000518839 TRAV8-1A0A0A6YYK1 113 aa11.41□□□□□ -0.58
TRAPPC9-205ENST00000518839 OVOL1O14753 267 aa11.41□□□□□ -0.58
TRAPPC9-205ENST00000518839 PFN1P07737 140 aaKnown RBP11.41□□□□□ -0.58
TRAPPC9-205ENST00000518839 FOLR2P14207 255 aa11.41□□□□□ -0.58
TRAPPC9-205ENST00000518839 HLA-DMBP28068 263 aa11.41□□□□□ -0.58
TRAPPC9-205ENST00000518839 FOXL1Q12952 345 aa11.41□□□□□ -0.58
TRAPPC9-205ENST00000518839 FHL3Q13643 280 aa11.41□□□□□ -0.58
TRAPPC9-205ENST00000518839 NHLRC2Q8NBF2 726 aa11.41□□□□□ -0.58
TRAPPC9-205ENST00000518839 SGK494Q96LW2 274 aa11.41□□□□□ -0.58
TRAPPC9-205ENST00000518839 TRBV24-1A0A075B6N3 115 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 TRAV9-1A0A075B6T8 112 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 IGKV2-40A0A087WW87 121 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 CCL24O00175 119 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 GATCO43716 136 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 IGKV2D-40P01614 121 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 CT45A10P0DMU9 189 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 PAFAH1B2P68402 229 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 IGFL4Q6B9Z1 124 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 COX8CQ7Z4L0 72 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 GBGT1Q8N5D6 347 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 RNF182Q8N6D2 247 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 DAZAP1Q96EP5 407 aaKnown RBP11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 RAX2Q96IS3 184 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 IL36BQ9NZH7 164 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 URGCP-MRPS24S4R325 110 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 V9GYV3 84 aa11.4□□□□□ -0.58
TRAPPC9-205ENST00000518839 ZNF705GA8MUZ8 300 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-205ENST00000518839 ZNF705FA8MVS1 300 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-205ENST00000518839 RPL19P84098 196 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-205ENST00000518839 PRR27Q6MZM9 219 aa11.39□□□□□ -0.59
TRAPPC9-205ENST00000518839 C11orf44Q8N8P7 122 aa11.39□□□□□ -0.59
TRAPPC9-205ENST00000518839 ZNF738Q8NE65 137 aa11.39□□□□□ -0.59
TRAPPC9-205ENST00000518839 OR4B1Q8NGF8 309 aa11.39□□□□□ -0.59
TRAPPC9-205ENST00000518839 DLX4Q92988 240 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-205ENST00000518839 RNASE7Q9H1E1 156 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-205ENST00000518839 PPP1R14DQ9NXH3 145 aa11.39□□□□□ -0.59
TRAPPC9-205ENST00000518839 TRAV2A0A0B4J234 112 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 A0A1W2PRX2 142 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 RAB5AP20339 215 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 EDN2P20800 178 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 CT83Q5H943 113 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 TMEM78Q5T7P6 136 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 NDUFA11Q86Y39 141 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 NUDT10Q8NFP7 164 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 DCANP1Q8TF63 244 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 NUDT11Q96G61 164 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 PRR25Q96S07 402 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 PYGO2Q9BRQ0 406 aa11.38□□□□□ -0.59
TRAPPC9-205ENST00000518839 LENEPQ9Y5L5 61 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms