RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 Q9H3A6 140 aa7.05□□□□□ -1.28
CLN8-203ENST00000518780 SELENOKQ9Y6D0 94 aa7.05□□□□□ -1.28
CLN8-203ENST00000518780 DNHD1Q96M86 4753 aa7.05□□□□□ -1.28
CLN8-203ENST00000518780 NOTCH1P46531 2555 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 RBAKDNA6NC62 111 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 PGPA6NDG6 321 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 FAM74A7A6NL05 159 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 F6UZH7 168 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 K7EQM0 130 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 NDUFS6O75380 124 aaKnown RBP7.04□□□□□ -1.28
CLN8-203ENST00000518780 EIF3GO75821 320 aaKnown RBP eCLIP7.04□□□□□ -1.28
CLN8-203ENST00000518780 SLC25A5P05141 298 aaKnown RBP7.04□□□□□ -1.28
CLN8-203ENST00000518780 ICAM4Q14773 271 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 FAM24BQ8N5W8 94 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 C5orf17Q8NAS9 161 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 ZNF738Q8NE65 137 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 OR10J6PQ8NGY7 276 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 HIST1H2BAQ96A08 127 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 TMPRSS5Q9H3S3 457 aa7.04□□□□□ -1.28
CLN8-203ENST00000518780 SAV1Q9H4B6 383 aaPredicted RBP7.04□□□□□ -1.28
CLN8-203ENST00000518780 SORL1Q92673 2214 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 A0A0J9YX75 114 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 H3BTX0 84 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 SNRPCP09234 159 aaKnown RBP7.03□□□□□ -1.28
CLN8-203ENST00000518780 HLA-DRB4P13762 266 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 NUTF2P61970 127 aaKnown RBP7.03□□□□□ -1.28
CLN8-203ENST00000518780 SUMO1P63165 101 aaKnown RBP7.03□□□□□ -1.28
CLN8-203ENST00000518780 EXOC3-AS1Q8N2X6 119 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 OR8A1Q8NGG7 326 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 C20orf173Q96LM9 149 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 LINC00477Q96M19 166 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 PRR25Q96S07 402 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 TUBA4BQ9H853 241 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 PPP1R14DQ9NXH3 145 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 GNG13Q9P2W3 67 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 HLA-DRB4X5D2U9 266 aa7.03□□□□□ -1.28
CLN8-203ENST00000518780 KIR2DL5BA0A0G2JN68 375 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 KIR2DL5BA0A0G2JPC4 375 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 TRBV7-9A0A0J9YWB2 115 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 A8MTW9 85 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 GGTLC3B5MD39 225 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 H3BMM0 161 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 RGS13O14921 159 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 PDE6DO43924 150 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 PAGE4O60829 102 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 S100A9P06702 114 aaKnown RBP7.02□□□□□ -1.29
CLN8-203ENST00000518780 NMBP08949 121 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 CCL20P78556 96 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 IFITM2Q01629 132 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 CLLU1Q5K131 121 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 CST9LP1Q5W188 147 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 MORN3Q6PF18 240 aaPredicted RBP7.02□□□□□ -1.29
CLN8-203ENST00000518780 STHQ8IWL8 128 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 CCDC28AQ8IWP9 274 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 KIR2DL5AQ8N109 375 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 RNF182Q8N6D2 247 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 KIR2DL5BQ8NHK3 375 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 SMDT1Q9H4I9 107 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 AURKAIP1Q9NWT8 199 aaPredicted RBP7.02□□□□□ -1.29
CLN8-203ENST00000518780 VAX2Q9UIW0 290 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 EPDR1Q9UM22 224 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 YTHDF2Q9Y5A9 579 aaKnown RBP7.02□□□□□ -1.29
CLN8-203ENST00000518780 LENEPQ9Y5L5 61 aa7.02□□□□□ -1.29
CLN8-203ENST00000518780 LOC102724200A0A096LPH7 203 aaPredicted RBP7.01□□□□□ -1.29
CLN8-203ENST00000518780 A0A1B0GV50 99 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 DIRC3C9JPN6 131 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 C11orf94C9JXX5 98 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 NPIPB6E9PJ23 425 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 M0R3E3 92 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 UBE2CO00762 179 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 AMBPP02760 352 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 TCRAP04437 139 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 IGHV4-30-4P0DP06 118 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 BCL2P10415 239 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 UBE2G2P60604 165 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 MEF2BQ02080 365 aaPredicted RBP7.01□□□□□ -1.29
CLN8-203ENST00000518780 ACTL10Q5JWF8 245 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 IGFL4Q6B9Z1 124 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 C9orf47Q6ZRZ4 202 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 APRG1Q8IVJ8 170 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 DEFB125Q8N687 156 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 ODF3Q96PU9 254 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 ATG101Q9BSB4 218 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 SRD5A3Q9H8P0 318 aa7.01□□□□□ -1.29
CLN8-203ENST00000518780 RBFOX3A6NFN3 312 aa7□□□□□ -1.29
CLN8-203ENST00000518780 ZNF705FA8MVS1 300 aaPredicted RBP7□□□□□ -1.29
CLN8-203ENST00000518780 HLA-DMBP28068 263 aa7□□□□□ -1.29
CLN8-203ENST00000518780 TSPOP30536 169 aa7□□□□□ -1.29
CLN8-203ENST00000518780 CNN1P51911 297 aaKnown RBP7□□□□□ -1.29
CLN8-203ENST00000518780 APOC4P55056 127 aa7□□□□□ -1.29
CLN8-203ENST00000518780 TMEM78Q5T7P6 136 aa7□□□□□ -1.29
CLN8-203ENST00000518780 LINC00322Q6ZN03 302 aaPredicted RBP7□□□□□ -1.29
CLN8-203ENST00000518780 TRPT1Q86TN4 253 aaKnown RBP7□□□□□ -1.29
CLN8-203ENST00000518780 CYB561D1Q8N8Q1 229 aa7□□□□□ -1.29
CLN8-203ENST00000518780 FAM210AQ96ND0 272 aa7□□□□□ -1.29
CLN8-203ENST00000518780 C1QTNF4Q9BXJ3 329 aa7□□□□□ -1.29
CLN8-203ENST00000518780 TRBV6-1A0A0K0K1D8 114 aa6.99□□□□□ -1.29
CLN8-203ENST00000518780 LOC102723971A0A1B0GUV8 181 aa6.99□□□□□ -1.29
CLN8-203ENST00000518780 KNCNA6PVL3 124 aa6.99□□□□□ -1.29
CLN8-203ENST00000518780 PRAC2D3DTV9 90 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms