RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 DSPPQ9NZW4 1301 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 CD163L1Q9NR16 1453 aa2.07□□□□□ -2.08
VPS13B-207ENST00000518569 ANKRD36CQ5JPF3 1778 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 DENND4AQ7Z401 1863 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 TRGV10A0A0A0MS01 117 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 A8MWL6 223 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 TMEM262E9PQX1 116 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 LY6LH3BQJ8 138 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF73O43830 326 aaPredicted RBP2.06□□□□□ -2.08
VPS13B-207ENST00000518569 HIST1H2BKO60814 126 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 SOD1P00441 154 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 HRASP01112 189 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 HIST1H2BJP06899 126 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 SPINK8P0C7L1 97 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF688P0C7X2 276 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 PYYP10082 97 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 CRYBB3P26998 211 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 CSN1S1P47710 185 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 LINC00313P59037 77 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 KRTAP10-10P60014 251 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 SYCNQ0VAF6 134 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF846Q147U1 533 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 MPV17L2Q567V2 206 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 MRPL54Q6P161 138 aaKnown RBP2.06□□□□□ -2.08
VPS13B-207ENST00000518569 C22orf39Q6P5X5 142 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 IGFL1Q6UW32 110 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 NTM-AS1Q6ZSK4 140 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 RPS19BP1Q86WX3 136 aaKnown RBP2.06□□□□□ -2.08
VPS13B-207ENST00000518569 ORMDL3Q8N138 153 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 SLC25A29Q8N8R3 303 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 PLPP5Q8NEB5 264 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 OR10P1Q8NGE3 313 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 FAM57AQ8TBR7 257 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 S100ZQ8WXG8 99 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 S100A13Q99584 98 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 SEC11CQ9BY50 192 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 XAGE1AQ9HD64 81 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 TXNL4BQ9NX01 149 aaKnown RBP2.06□□□□□ -2.08
VPS13B-207ENST00000518569 FKBP11Q9NYL4 201 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 BET1LQ9NYM9 111 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF492Q9P255 531 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 COMMD3Q9UBI1 195 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 CDH23Q9H251 3354 aa2.06□□□□□ -2.08
VPS13B-207ENST00000518569 LRRC37A2A6NM11 1700 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 ZFHX4Q86UP3 3567 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 LTBP2Q14767 1821 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 CHD5Q8TDI0 1954 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 USP34Q70CQ2 3546 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 TRAV41A0A0B4J266 112 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 C9JCJ5 164 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 APOC4-APOC2K7ER74 178 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 K7ERS5 55 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 UQCRQO14949 82 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 PLA2G10O15496 165 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 IGHV3-11P01762 117 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 APOC2P02655 101 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 RBP4P02753 201 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 MT-ND6P03923 174 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 PRM2P04554 102 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF14P17017 642 aaPredicted RBP2.05□□□□□ -2.08
VPS13B-207ENST00000518569 HBBP68871 147 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF90Q03938 601 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 CATR1Q13166 79 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 KLRD1Q13241 179 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF141Q15928 474 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 TMEM155Q4W5P6 130 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 Q56UQ5 140 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 PYY3Q5JQD4 70 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF678Q5SXM1 525 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 DNAJC24Q6P3W2 148 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 UNQ9165/PRO28630Q6UXU0 137 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 LYPD1Q8N2G4 141 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 OR4B1Q8NGF8 309 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 FNDC9Q8TBE3 224 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 PSMF1Q92530 271 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 PRELID3AQ96N28 172 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 VAMP8Q9BV40 100 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 PLEKHF2Q9H8W4 249 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 MRPS16Q9Y3D3 137 aaKnown RBP2.05□□□□□ -2.08
VPS13B-207ENST00000518569 SETXQ7Z333 2677 aaKnown RBP2.05□□□□□ -2.08
VPS13B-207ENST00000518569 TRANK1O15050 2925 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 MRC1P22897 1456 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 SIPA1L3O60292 1781 aaPredicted RBP2.05□□□□□ -2.08
VPS13B-207ENST00000518569 MAST2Q6P0Q8 1798 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 MYO10Q9HD67 2058 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 PKD1L2Q7Z442 2459 aa2.05□□□□□ -2.08
VPS13B-207ENST00000518569 DMXL1Q9Y485 3027 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 TRAV12-2A0A075B6T6 113 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 IGHV3OR15-7A0A075B7D8 119 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 TRAV40A0A0B4J280 105 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 IGHV1OR15-9A0A0B4J2B8 117 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 A0A0D9SG52 128 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 TRBV27A0A0K0K1C4 114 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 C3orf85A0A1B0GTC6 90 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 LOC100130705A0A1B0GUX0 176 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 A0A1W2PRS3 328 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 TMEM223A0PJW6 202 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 ODAMA1E959 279 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 XIRP2A4UGR9 3374 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 GEMIN2O14893 280 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms