RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 IFNA1P01562 189 aa8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 SNRPCP09234 159 aaKnown RBP8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 BCL2P10415 239 aa8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 ODF3L2Q3SX64 289 aa8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 WFDC3Q8IUB2 231 aa8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 IQCF2Q8IXL9 164 aa8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 Q8N3U1 123 aa8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 FAM24BQ8N5W8 94 aa8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 C20orf173Q96LM9 149 aa8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 SMDT1Q9H4I9 107 aa8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 YTHDF2Q9Y5A9 579 aaKnown RBP8.51□□□□□ -1.05
ARFGEF1-202ENST00000517955 DNAH3Q8TD57 4116 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 SERTM2A0A1B0GWG4 89 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 PGPA6NDG6 321 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 GGTLC3B5MD39 225 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 G3V4G9 280 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 PAGE4O60829 102 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 TFPI2P48307 235 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 KRTAP10-11P60412 298 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 SUMO1P63165 101 aaKnown RBP8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 ICAM4Q14773 271 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 GTSCR1Q86UQ5 136 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 Q8N1Y9 231 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 EXOC3-AS1Q8N2X6 119 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 C5orf17Q8NAS9 161 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 FAM210AQ96ND0 272 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 CLUHP3Q96NS8 147 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 MAP6D1Q9H9H5 199 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 GNG13Q9P2W3 67 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 VAX2Q9UIW0 290 aa8.5□□□□□ -1.05
ARFGEF1-202ENST00000517955 LOC102723971A0A1B0GUV8 181 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 A0A1B0GV50 99 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 RBAKDNA6NC62 111 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 RBFOX3A6NFN3 312 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 A8MTW9 85 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 OR11H12B2RN74 326 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 SLC25A5P05141 298 aaKnown RBP8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 ZNF688P0C7X2 276 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 CSN1S1P47710 185 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 MEF2BQ02080 365 aaPredicted RBP8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 PSMG4Q5JS54 123 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 ZNF506Q5JVG8 444 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 XP32Q5T750 250 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 FOXI2Q6ZQN5 318 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 RNF182Q8N6D2 247 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 HIST1H2BAQ96A08 127 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 PPP1R14DQ9NXH3 145 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 EPDR1Q9UM22 224 aa8.49□□□□□ -1.05
ARFGEF1-202ENST00000517955 RAB19A4D1S5 217 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 FBLL1A6NHQ2 334 aaKnown RBP8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 DIRC3C9JPN6 131 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 C11orf94C9JXX5 98 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 M0R3E3 92 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 EREGO14944 169 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 PDE6DO43924 150 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 CD7P09564 240 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 HLA-DMBP28068 263 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 DEFB131AP59861 70 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 CD81P60033 236 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 UBE2G2P60604 165 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 CST9LP1Q5W188 147 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 IGFL4Q6B9Z1 124 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 CMTM2Q8TAZ6 248 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 PCNPQ8WW12 178 aaKnown RBP8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 C11orf52Q96A22 123 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 RPUSD4Q96CM3 377 aaKnown RBP8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 LINC00052Q96N35 136 aa8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 SAV1Q9H4B6 383 aaPredicted RBP8.48□□□□□ -1.05
ARFGEF1-202ENST00000517955 A0A0J9YX75 114 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 LINC00862A6NCI5 91 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 ZNF705FA8MVS1 300 aaPredicted RBP8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 A8MZ25 164 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 F6UZH7 168 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 TCRAP04437 139 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 HLA-DRB4P13762 266 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 ATP5G3P48201 142 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 C9orf47Q6ZRZ4 202 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 ZNF738Q8NE65 137 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 OR8A1Q8NGG7 326 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 ATG101Q9BSB4 218 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 KLF12Q9Y4X4 402 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 HLA-DRB4X5D2U9 266 aa8.47□□□□□ -1.05
ARFGEF1-202ENST00000517955 TRBV7-9A0A0J9YWB2 115 aa8.46□□□□□ -1.06
ARFGEF1-202ENST00000517955 PRAC2D3DTV9 90 aa8.46□□□□□ -1.06
ARFGEF1-202ENST00000517955 NPIPB6E9PJ23 425 aa8.46□□□□□ -1.06
ARFGEF1-202ENST00000517955 TMEM250H0YL14 139 aa8.46□□□□□ -1.06
ARFGEF1-202ENST00000517955 DUSP14O95147 198 aaKnown RBP8.46□□□□□ -1.06
ARFGEF1-202ENST00000517955 HAGHQ16775 308 aa8.46□□□□□ -1.06
ARFGEF1-202ENST00000517955 EBLN2Q6P2I7 272 aa8.46□□□□□ -1.06
ARFGEF1-202ENST00000517955 EIF4E3Q8N5X7 224 aaKnown RBP8.46□□□□□ -1.06
ARFGEF1-202ENST00000517955 LINC00477Q96M19 166 aa8.46□□□□□ -1.06
ARFGEF1-202ENST00000517955 RARRES2Q99969 163 aa8.46□□□□□ -1.06
ARFGEF1-202ENST00000517955 TRBV6-1A0A0K0K1D8 114 aa8.45□□□□□ -1.06
ARFGEF1-202ENST00000517955 H3BMM0 161 aa8.45□□□□□ -1.06
ARFGEF1-202ENST00000517955 K7EQM0 130 aa8.45□□□□□ -1.06
ARFGEF1-202ENST00000517955 PEX7O00628 323 aa8.45□□□□□ -1.06
ARFGEF1-202ENST00000517955 S100A9P06702 114 aaKnown RBP8.45□□□□□ -1.06
ARFGEF1-202ENST00000517955 PEA15Q15121 130 aa8.45□□□□□ -1.06
ARFGEF1-202ENST00000517955 CYB561D1Q8N8Q1 229 aa8.45□□□□□ -1.06
ARFGEF1-202ENST00000517955 TMEM75Q8N9X5 138 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms