RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 OR5P3Q8WZ94 311 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 TAMM41Q96BW9 452 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 GNPNAT1Q96EK6 184 aaPredicted RBP1.79□□□□□ -2.12
CPNE3-204ENST00000517862 CCDC42Q96M95 316 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 SDF2Q99470 211 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 HRASLSQ9HDD0 168 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 NUBP2Q9Y5Y2 271 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 LY96Q9Y6Y9 160 aa1.79□□□□□ -2.12
CPNE3-204ENST00000517862 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.78□□□□□ -2.12
CPNE3-204ENST00000517862 OR2T1O43869 369 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 PITX3O75364 302 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 IL4P05112 153 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 HMGN2P05204 90 aaKnown RBP1.78□□□□□ -2.12
CPNE3-204ENST00000517862 ATP5G1P05496 136 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 ORM2P19652 201 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 GADD45AP24522 165 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 CDK2P24941 298 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 PSMA1P25786 263 aaKnown RBP1.78□□□□□ -2.12
CPNE3-204ENST00000517862 GABARAPL2P60520 117 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 BASP1P80723 227 aaKnown RBP1.78□□□□□ -2.12
CPNE3-204ENST00000517862 FMODQ06828 376 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 ZNF816Q0VGE8 651 aaPredicted RBP1.78□□□□□ -2.12
CPNE3-204ENST00000517862 FADDQ13158 208 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 RSU1Q15404 277 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 MMDQ15546 238 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 IMPG1Q17R60 797 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 ACSM3Q53FZ2 586 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 SAPCD1Q5SSQ6 148 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 C1orf195Q5TG92 126 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 EBLN2Q6P2I7 272 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 ZNF880Q6PDB4 577 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 TBPL2Q6SJ96 375 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 RASSF6Q6ZTQ3 369 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 ATP5L2Q7Z4Y8 100 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 HMGN2P46Q86SG4 172 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 TRAPPC6BQ86SZ2 158 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 NAA40Q86UY6 237 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 ZFP82Q8N141 532 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 SLC35G3Q8N808 338 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 SPANXA2-OT1Q8N9U9 137 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 DGCR14Q96DF8 476 aaKnown RBP1.78□□□□□ -2.12
CPNE3-204ENST00000517862 SHANK2-AS3Q9BTD1 123 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 MRPS26Q9BYN8 205 aaKnown RBP1.78□□□□□ -2.12
CPNE3-204ENST00000517862 TLNRD1Q9H1K6 362 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 OR51V1Q9H2C8 321 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 LINC00312Q9Y6C7 94 aa1.78□□□□□ -2.12
CPNE3-204ENST00000517862 A6NED7 52 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 TMEM210A6NLX4 147 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 COLCA2A8K830 154 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 B4DEV8 164 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 TMEM250H0YL14 139 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 K7EP13 123 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 APOC4-APOC2K7ER74 178 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 FAAHO00519 579 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 HBZP02008 142 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 APOC2P02655 101 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 ISG15P05161 165 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 LINC00614P0C842 121 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 NEFHP12036 1026 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 EVI2AP22794 236 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 CFL1P23528 166 aaKnown RBP1.77□□□□□ -2.13
CPNE3-204ENST00000517862 GUCA1AP43080 201 aaPredicted RBP1.77□□□□□ -2.13
CPNE3-204ENST00000517862 AP2S1P53680 142 aaPredicted RBP1.77□□□□□ -2.13
CPNE3-204ENST00000517862 EDDM3AQ14507 147 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 JOSD1Q15040 202 aaPredicted RBP1.77□□□□□ -2.13
CPNE3-204ENST00000517862 RGS21Q2M5E4 152 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 AKIRIN2Q53H80 203 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 CLVS2Q5SYC1 327 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 C10orf128Q5T292 105 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 FAM71E1Q6IPT2 247 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 HAGHLQ6PII5 290 aaPredicted RBP1.77□□□□□ -2.13
CPNE3-204ENST00000517862 UNQ9165/PRO28630Q6UXU0 137 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 C16orf78Q8WTQ4 265 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 AMELYQ99218 206 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 FAM103A1Q9BTL3 118 aaKnown RBP1.77□□□□□ -2.13
CPNE3-204ENST00000517862 TSGA10Q9BZW7 698 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 GABARAPL1Q9H0R8 117 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 TMEM216Q9P0N5 145 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 RNF11Q9Y3C5 154 aa1.77□□□□□ -2.13
CPNE3-204ENST00000517862 IGKV2D-24A0A075B6R9 120 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 hCG_1818297A0A087WSY0 165 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 IGHV3-43A0A0B4J1X8 118 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 A0A0J9YY99 117 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 SMIM9A6NGZ8 99 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 SMIM23A6NLE4 172 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 A8MWP6 167 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 ZNF736B4DX44 427 aaPredicted RBP1.76□□□□□ -2.13
CPNE3-204ENST00000517862 PPP5D1E7EU14 171 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 MRASO14807 208 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 ZNF189O75820 626 aaPredicted RBP1.76□□□□□ -2.13
CPNE3-204ENST00000517862 RPP14O95059 124 aaKnown RBP1.76□□□□□ -2.13
CPNE3-204ENST00000517862 CDRT1O95170 752 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 IGHV3-7P01780 117 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 MT2AP02795 61 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 IL6P05231 212 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 OR13C7P0DN81 318 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 DEFB130BP0DP73 79 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 DEFB130AP0DP74 79 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 CD36P16671 472 aa1.76□□□□□ -2.13
CPNE3-204ENST00000517862 PPP1CCP36873 323 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms