RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 MBD3L1Q8WWY6 194 aa4.06□□□□□ -1.76
SCARNA16.4-201ENST00000516956 MRPL53Q96EL3 112 aaKnown RBP4.06□□□□□ -1.76
SCARNA16.4-201ENST00000516956 SAT2Q96F10 170 aaPredicted RBP4.06□□□□□ -1.76
SCARNA16.4-201ENST00000516956 C17orf77Q96MU5 243 aa4.06□□□□□ -1.76
SCARNA16.4-201ENST00000516956 NDFIP1Q9BT67 221 aa4.06□□□□□ -1.76
SCARNA16.4-201ENST00000516956 TMEM208Q9BTX3 173 aa4.06□□□□□ -1.76
SCARNA16.4-201ENST00000516956 CSTL1Q9H114 145 aa4.06□□□□□ -1.76
SCARNA16.4-201ENST00000516956 SAV1Q9H4B6 383 aaPredicted RBP4.06□□□□□ -1.76
SCARNA16.4-201ENST00000516956 MANBALQ9NQG1 85 aa4.06□□□□□ -1.76
SCARNA16.4-201ENST00000516956 GNG13Q9P2W3 67 aa4.06□□□□□ -1.76
SCARNA16.4-201ENST00000516956 MGAM2Q2M2H8 2515 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 A0A0J9YX75 114 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 A0A1W2PRE2 83 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 FBLL1A6NHQ2 334 aaKnown RBP4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ZNF705FA8MVS1 300 aaPredicted RBP4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 SLC17A3O00476 420 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 SOCS3O14543 225 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 MRPS12O15235 138 aaKnown RBP4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 CA1P00915 261 aaPredicted RBP4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 HLA-DRB4P13762 266 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 LEPP41159 167 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 FHITP49789 147 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 UBE2G1P62253 170 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 TEX261Q6UWH6 196 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 Q8N1Y9 231 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 FAM24BQ8N5W8 94 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ARL6IP6Q8N6S5 226 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 C5orf17Q8NAS9 161 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 LINC00477Q96M19 166 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 TXNDC17Q9BRA2 123 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 WFDC10AQ9H1F0 79 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 TMPRSS5Q9H3S3 457 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 GOLT1BQ9Y3E0 138 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 HLA-DRB4X5D2U9 266 aa4.05□□□□□ -1.76
SCARNA16.4-201ENST00000516956 TRAV8-2A0A0B4J237 113 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 TRAV1-1A0A0B4J248 108 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 KIR2DL5BA0A0G2JN68 375 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 KIR2DL5BA0A0G2JPC4 375 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 A8MZ25 164 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 C11orf94C9JXX5 98 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 F6UB75 175 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 H3BMM0 161 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 M0R3E3 92 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 PAGE4O60829 102 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 NDUFB4O95168 129 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 NHLRC4P0CG21 123 aaPredicted RBP4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ZNF705DP0CH99 300 aaPredicted RBP4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ZNF705BP0CI00 300 aaPredicted RBP4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 HLA-DMBP28068 263 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 AKR1C3P42330 323 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 CNN1P51911 297 aaKnown RBP4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ZNF138P52744 262 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ZNF726P1Q15940 193 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ZNF124Q15973 351 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 HAGHQ16775 308 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 GOLT1AQ6ZVE7 132 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ZNF767PQ75MW2 155 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 SSX7Q7RTT5 188 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 KIR2DL5AQ8N109 375 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ZNF680Q8NEM1 530 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 KIR2DL5BQ8NHK3 375 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 SUN5Q8TC36 379 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 HIST1H2BAQ96A08 127 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 C20orf173Q96LM9 149 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 RCHY1Q96PM5 261 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ASCL2Q99929 193 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 SPATA25Q9BR10 227 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 TCEAL7Q9BRU2 100 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 EIF5A2Q9GZV4 153 aaKnown RBP4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ARL2-SNX15V9GYD0 113 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 NBEAL1Q6ZS30 2694 aa4.04□□□□□ -1.76
SCARNA16.4-201ENST00000516956 NOTCH3Q9UM47 2321 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 IGHV3OR16-12A0A075B7B8 117 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 IGKV2-40A0A087WW87 121 aaPredicted RBP4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 RBAKDNA6NC62 111 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 FAM74A7A6NL05 159 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 DIRC3C9JPN6 131 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 NPIPB6E9PJ23 425 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 J3KRW8 73 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 PEX7O00628 323 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 PDE6DO43924 150 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 INSP01308 110 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 IGKV2D-40P01614 121 aaPredicted RBP4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 S100A9P06702 114 aaKnown RBP4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 GPX1P07203 203 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 CDKN1BP46527 198 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 CEBPGP53567 150 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 FXYD7P58549 80 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ERCC8Q13216 396 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 SAPCD1Q5SSQ6 148 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 TRPT1Q86TN4 253 aaKnown RBP4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 CCDC28AQ8IWP9 274 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 CYB561D1Q8N8Q1 229 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ZNF503Q96F45 646 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 CLUHP3Q96NS8 147 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 B9D2Q9BPU9 175 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 NIPSNAP3BQ9BS92 247 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 ATG101Q9BSB4 218 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 C19orf73Q9NVV2 129 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 XCL2Q9UBD3 114 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms