RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 USF2Q15853 346 aaPredicted RBP2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 IQCJQ1A5X6 159 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 AARDQ4LEZ3 155 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM41BQ5BJD5 291 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 C19orf54Q5BKX5 351 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 MMD2Q8IY49 270 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM256Q8N2U0 113 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 CCDC71LQ8N9Z2 235 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 OR10G8Q8NGN5 311 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 OR1L6Q8NGR2 347 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 OR5B3Q8NH48 314 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 MYOZ3Q8TDC0 251 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 RNASE8Q8TDE3 154 aaKnown RBP2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 IL22RA2Q969J5 263 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 USMG5Q96IX5 58 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 RITA1Q96K30 269 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 UBE2E2Q96LR5 201 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 HARBI1Q96MB7 349 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 ATP6V0BQ99437 205 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 SPIN2AQ99865 258 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 SPIN2BQ9BPZ2 258 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 RSG1Q9BU20 258 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 MAP1LC3BQ9GZQ8 125 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 MAGT1Q9H0U3 335 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 RBKSQ9H477 322 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 CCL28Q9NRJ3 127 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 GNG13Q9P2W3 67 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 NAT8Q9UHE5 227 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 PRNDQ9UKY0 176 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 TP53TG1Q9Y2A0 90 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF257Q9Y2Q1 563 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 CBY1Q9Y3M2 126 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 TIMM9Q9Y5J7 89 aa2.26□□□□□ -2.05
SCARNA13-201ENST00000516672 TRAV41A0A0B4J266 112 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 C3orf85A0A1B0GTC6 90 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 ZFP92A6NM28 416 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 PMS2P5A8MQ11 134 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 NPIPB5A8MRT5 1133 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 CEBPZOSA8MTT3 80 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF705GA8MUZ8 300 aaPredicted RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 F2Z2F3 143 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM250H0YL14 139 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 H7BYZ3 331 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 UPK2O00526 184 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 FCN1O00602 326 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 IGKV1-5P01602 117 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 CRYGCP07315 174 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 SAA1P0DJI8 122 aaPredicted RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 SLC25A6P12236 298 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 OR10J1P30954 320 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 ADMP35318 185 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 RPL29P47914 159 aaKnown RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 PCP4P48539 62 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 RAB9AP51151 201 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 CNN1P51911 297 aaKnown RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 CEBPGP53567 150 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 PTTG1IPP53801 180 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 FAM3BP58499 235 aaPredicted RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 ERVK-16P61578 105 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 RPL30P62888 115 aaKnown RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 RPL8P62917 257 aaKnown RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 MEF2BQ02080 365 aaPredicted RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 FXYD3Q14802 87 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 PLGLAQ15195 96 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 ADIRFQ15847 76 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM241Q24JQ0 296 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 BSXQ3C1V8 233 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 ACOT6Q3I5F7 207 aaPredicted RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 TDRG1Q3Y452 100 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF585BQ52M93 769 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 OR4A47Q6IF82 309 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 LCN15Q6UWW0 184 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM14EPQ6UXP3 125 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 TBC1D26Q86UD7 250 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 TTC9CQ8N5M4 171 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 DEFB125Q8N687 156 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 STPG4Q8N801 248 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF114Q8NC26 417 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 OR52E5Q8NH55 327 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 OR51H1Q8NH63 302 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM37Q8WXS4 190 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 ARPC1AQ92747 370 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 LSM10Q969L4 123 aaKnown RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM18Q96B42 140 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 GPR146Q96CH1 333 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 C5orf30Q96GV9 206 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 OR4C12Q96R67 309 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 IMMP2LQ96T52 175 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 GPHA2Q96T91 129 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 SMIM7Q9BQ49 75 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 MIEN1Q9BRT3 115 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 PARLQ9H300 379 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 FBXL15Q9H469 300 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 ZNF430Q9H8G1 570 aaPredicted RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 TMEM14BQ9NUH8 114 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 THYN1Q9P016 225 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 FOXA2Q9Y261 457 aaPredicted RBP2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 PXMP4Q9Y6I8 212 aa2.25□□□□□ -2.05
SCARNA13-201ENST00000516672 TRBV20OR9-2A0A075B6H5 130 aa2.24□□□□□ -2.05
SCARNA13-201ENST00000516672 TRBV9A0A0B4J1U6 114 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms