RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, human

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-225	ENST00000515824	OR51M1	Q9H341	326 aa		13.97	□□□□□ -0.17
LMNA-225	ENST00000515824	RFNG	Q9Y644	331 aa		13.97	□□□□□ -0.17
LMNA-225	ENST00000515824	LYST	Q99698	3801 aa		13.97	□□□□□ -0.17
LMNA-225	ENST00000515824	ZNF266	Q14584	549 aa		13.96	□□□□□ -0.17
LMNA-225	ENST00000515824		Q5BKY6	102 aa		13.96	□□□□□ -0.17
LMNA-225	ENST00000515824	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-225	ENST00000515824	PAXX	Q9BUH6	204 aa		13.96	□□□□□ -0.17
LMNA-225	ENST00000515824	PRELID1	Q9Y255	219 aa		13.96	□□□□□ -0.17
LMNA-225	ENST00000515824	PRAC2	D3DTV9	90 aa		13.95	□□□□□ -0.18
LMNA-225	ENST00000515824	CRX	O43186	299 aa	Predicted RBP	13.95	□□□□□ -0.18
LMNA-225	ENST00000515824	NBEAP1	P0C6P0	100 aa		13.95	□□□□□ -0.18
LMNA-225	ENST00000515824	RRN3P1	Q2M238	152 aa		13.95	□□□□□ -0.18
LMNA-225	ENST00000515824	MRPL53	Q96EL3	112 aa	Known RBP	13.95	□□□□□ -0.18
LMNA-225	ENST00000515824	AAMDC	Q9H7C9	122 aa		13.95	□□□□□ -0.18
LMNA-225	ENST00000515824	DNAH1	Q9P2D7	4330 aa		13.95	□□□□□ -0.18
LMNA-225	ENST00000515824	TRAV12-2	A0A075B6T6	113 aa		13.94	□□□□□ -0.18
LMNA-225	ENST00000515824	C11orf94	C9JXX5	98 aa		13.94	□□□□□ -0.18
LMNA-225	ENST00000515824	NDUFB4	O95168	129 aa		13.94	□□□□□ -0.18
LMNA-225	ENST00000515824	CDKN1B	P46527	198 aa		13.94	□□□□□ -0.18
LMNA-225	ENST00000515824	EMP1	P54849	157 aa		13.94	□□□□□ -0.18
LMNA-225	ENST00000515824	TAS2R45	P59539	299 aa		13.94	□□□□□ -0.18
LMNA-225	ENST00000515824	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.94	□□□□□ -0.18
LMNA-225	ENST00000515824	BAP18	Q8IXM2	172 aa		13.94	□□□□□ -0.18
LMNA-225	ENST00000515824	OR2T35	Q8NGX2	323 aa		13.94	□□□□□ -0.18
LMNA-225	ENST00000515824	RNF141	Q8WVD5	230 aa		13.94	□□□□□ -0.18
LMNA-225	ENST00000515824	OR7C2	O60412	319 aa		13.93	□□□□□ -0.18
LMNA-225	ENST00000515824	OR10J4	P0C629	311 aa		13.93	□□□□□ -0.18
LMNA-225	ENST00000515824	SPART-AS1	P0CW21	52 aa		13.93	□□□□□ -0.18
LMNA-225	ENST00000515824	TSPO	P30536	169 aa		13.93	□□□□□ -0.18
LMNA-225	ENST00000515824	FXYD5	Q96DB9	178 aa		13.93	□□□□□ -0.18
LMNA-225	ENST00000515824	LOC102723971	A0A1B0GUV8	181 aa		13.92	□□□□□ -0.18
LMNA-225	ENST00000515824		M0R3E3	92 aa		13.92	□□□□□ -0.18
LMNA-225	ENST00000515824	M6PR	P20645	277 aa		13.92	□□□□□ -0.18
LMNA-225	ENST00000515824	EXOC3-AS1	Q8N2X6	119 aa		13.92	□□□□□ -0.18
LMNA-225	ENST00000515824	RPP25L	Q8N5L8	163 aa	Known RBP	13.92	□□□□□ -0.18
LMNA-225	ENST00000515824	C2CD4C	Q8TF44	421 aa		13.92	□□□□□ -0.18
LMNA-225	ENST00000515824	LINC01587	Q99440	93 aa		13.92	□□□□□ -0.18
LMNA-225	ENST00000515824	CELA1	Q9UNI1	258 aa		13.92	□□□□□ -0.18
LMNA-225	ENST00000515824	ALMS1	Q8TCU4	4167 aa		13.91	□□□□□ -0.18
LMNA-225	ENST00000515824	FXYD6-FXYD2	A0A087WZ82	144 aa		13.91	□□□□□ -0.18
LMNA-225	ENST00000515824	ICAM4	Q14773	271 aa		13.91	□□□□□ -0.18
LMNA-225	ENST00000515824	C12orf74	Q32Q52	190 aa		13.91	□□□□□ -0.18
LMNA-225	ENST00000515824	KHDC3L	Q587J8	217 aa		13.91	□□□□□ -0.18
LMNA-225	ENST00000515824		Q6ZTC4	211 aa		13.91	□□□□□ -0.18
LMNA-225	ENST00000515824	TMEM256	Q8N2U0	113 aa		13.91	□□□□□ -0.18
LMNA-225	ENST00000515824	TRAV10	A0A0B4J240	114 aa		13.9	□□□□□ -0.18
LMNA-225	ENST00000515824	TEX48	A0A1B0GUV7	120 aa		13.9	□□□□□ -0.18
LMNA-225	ENST00000515824		A0A1W2PPV4	95 aa		13.9	□□□□□ -0.18
LMNA-225	ENST00000515824	NPIPB6	E9PJ23	425 aa		13.9	□□□□□ -0.18
LMNA-225	ENST00000515824	HSD17B11	Q8NBQ5	300 aa		13.9	□□□□□ -0.18
LMNA-225	ENST00000515824	ODF3	Q96PU9	254 aa		13.9	□□□□□ -0.18
LMNA-225	ENST00000515824	TNFSF18	Q9UNG2	199 aa		13.9	□□□□□ -0.18
LMNA-225	ENST00000515824	RYR2	Q92736	4967 aa		13.9	□□□□□ -0.18
LMNA-225	ENST00000515824	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	CT45A10	P0DMU9	189 aa		13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	UBE2L3	P68036	154 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	ZNF767P	Q75MW2	155 aa		13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	LYPD1	Q8N2G4	141 aa		13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	OR10G4	Q8NGN3	311 aa		13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	OR10G9	Q8NGN4	311 aa		13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	OR10G7	Q8NGN6	311 aa		13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	ZNF503	Q96F45	646 aa		13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	LINC00477	Q96M19	166 aa		13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	C20orf144	Q9BQM9	153 aa		13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	PSMG3	Q9BT73	122 aa	Predicted RBP	13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	DKK2	Q9UBU2	259 aa		13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.89	□□□□□ -0.19
LMNA-225	ENST00000515824	RNF222	A6NCQ9	220 aa		13.88	□□□□□ -0.19
LMNA-225	ENST00000515824	ATP6V0C	P27449	155 aa		13.88	□□□□□ -0.19
LMNA-225	ENST00000515824	LEP	P41159	167 aa		13.88	□□□□□ -0.19
LMNA-225	ENST00000515824	TCTA	P57738	103 aa		13.88	□□□□□ -0.19
LMNA-225	ENST00000515824	TAS2R60	P59551	318 aa		13.88	□□□□□ -0.19
LMNA-225	ENST00000515824	RAB2A	P61019	212 aa		13.88	□□□□□ -0.19
LMNA-225	ENST00000515824	RAN	P62826	216 aa	Known RBP	13.88	□□□□□ -0.19
LMNA-225	ENST00000515824	FAM122C	Q6P4D5	195 aa		13.88	□□□□□ -0.19
LMNA-225	ENST00000515824	OR2G3	Q8NGZ4	309 aa		13.88	□□□□□ -0.19
LMNA-225	ENST00000515824	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.87	□□□□□ -0.19
LMNA-225	ENST00000515824	IGLL5	B9A064	214 aa		13.87	□□□□□ -0.19
LMNA-225	ENST00000515824	MB	P02144	154 aa		13.87	□□□□□ -0.19
LMNA-225	ENST00000515824	CSN1S1	P47710	185 aa		13.87	□□□□□ -0.19
LMNA-225	ENST00000515824	SERF2	P84101	59 aa		13.87	□□□□□ -0.19
LMNA-225	ENST00000515824	ERCC8	Q13216	396 aa		13.87	□□□□□ -0.19
LMNA-225	ENST00000515824	FAM222A	Q5U5X8	452 aa		13.87	□□□□□ -0.19
LMNA-225	ENST00000515824	PQLC2	Q6ZP29	291 aa		13.87	□□□□□ -0.19
LMNA-225	ENST00000515824	LINC00476	Q8WZB0	136 aa		13.87	□□□□□ -0.19
LMNA-225	ENST00000515824	PHYHIPL	Q96FC7	376 aa		13.87	□□□□□ -0.19
LMNA-225	ENST00000515824	DEFB131B	A0A096LNP1	70 aa		13.86	□□□□□ -0.19
LMNA-225	ENST00000515824		H7BYZ3	331 aa		13.86	□□□□□ -0.19
LMNA-225	ENST00000515824	PRM2	P04554	102 aa		13.86	□□□□□ -0.19
LMNA-225	ENST00000515824	HTN1	P15515	57 aa		13.86	□□□□□ -0.19
LMNA-225	ENST00000515824	KIR3DS1	Q14943	382 aa		13.86	□□□□□ -0.19
LMNA-225	ENST00000515824	C9orf47	Q6ZRZ4	202 aa		13.86	□□□□□ -0.19
LMNA-225	ENST00000515824	NIPSNAP3B	Q9BS92	247 aa		13.86	□□□□□ -0.19
LMNA-225	ENST00000515824	AGPAT4-IT1	Q9H0P7	198 aa		13.86	□□□□□ -0.19
LMNA-225	ENST00000515824		J3KRW8	73 aa		13.85	□□□□□ -0.19
LMNA-225	ENST00000515824	EIF3G	O75821	320 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
LMNA-225	ENST00000515824	LY6G6C	O95867	125 aa		13.85	□□□□□ -0.19
LMNA-225	ENST00000515824	GFI1B	Q5VTD9	330 aa		13.85	□□□□□ -0.19
LMNA-225	ENST00000515824	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.85	□□□□□ -0.19
LMNA-225	ENST00000515824		Q9H3A6	140 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms