RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 HYPMO75409 117 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 ADAP1O75689 374 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 SFT2D2O95562 160 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 CXCL3P19876 107 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 TNFSF8P32971 234 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 CDKN1BP46527 198 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 SELENOTP62341 195 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 PPP1R1AQ13522 171 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 PSG3Q16557 428 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 TTC32Q5I0X7 151 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 ZNF493Q6ZR52 646 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 SSX7Q7RTT5 188 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 OR10J6PQ8NGY7 276 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 MCFD2Q8NI22 146 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 TMEM263Q8WUH6 116 aaKnown RBP6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 UHRF2Q96PU4 802 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 BCL7BQ9BQE9 202 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 SLC25A21Q9BQT8 299 aaPredicted RBP6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 SHANK2-AS3Q9BTD1 123 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 RNF24Q9Y225 148 aa6.21□□□□□ -1.42
CDC42SE2-212ENST00000515533 A0A087X0K7 114 aa6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 ANXA7P20073 488 aaKnown RBP6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 TMBIM6P55061 237 aa6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 OR5I1Q13606 314 aa6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 PYDC2Q56P42 97 aa6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 SPATA12Q7Z6I5 190 aa6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 GNPNAT1Q96EK6 184 aaPredicted RBP6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 SLIRPQ9GZT3 109 aaKnown RBP6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 ARL6Q9H0F7 186 aa6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 Q9H8V8 135 aa6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 NOP10Q9NPE3 64 aaKnown RBP6.2□□□□□ -1.42
CDC42SE2-212ENST00000515533 TRAV26-1A0A087WT03 109 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 H7BYZ3 331 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 SSSCA1O60232 199 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 PLP1P60201 277 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 RRAS2P62070 204 aaPredicted RBP6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 LCN15Q6UWW0 184 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 RNASE8Q8TDE3 154 aaKnown RBP6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 DEDD2Q8WXF8 326 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 TRIM63Q969Q1 353 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 RPUSD4Q96CM3 377 aaKnown RBP6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 SOSTQ9BQB4 213 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 C20orf144Q9BQM9 153 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 SLC50A1Q9BRV3 221 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 ARV1Q9H2C2 271 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 NPVFQ9HCQ7 196 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 PSENENQ9NZ42 101 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 MGAT4CQ9UBM8 478 aa6.19□□□□□ -1.42
CDC42SE2-212ENST00000515533 PMS2P5A8MQ11 134 aa6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 SNURFLB1AK76 121 aa6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 GOSR2O14653 212 aa6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 RLN2P04090 185 aa6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 PRB4P10163 310 aaPredicted RBP6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 CXCL2P19875 107 aa6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 M6PRP20645 277 aa6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 UBE2MP61081 183 aaKnown RBP6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 POLR2GP62487 172 aaKnown RBP eCLIP6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 DLK1P80370 383 aa6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 CCDC190Q86UF4 302 aa6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 RXFP4Q8TDU9 374 aa6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 Q9H3A6 140 aa6.18□□□□□ -1.42
CDC42SE2-212ENST00000515533 A0A0J9YY99 117 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 H3BMQ9 156 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 METTL15P1P0C7V9 234 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 S100A5P33763 92 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 SLC38A11Q08AI6 406 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 PXDC1Q5TGL8 231 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 LINC00305Q7Z4B0 112 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 ZNF546Q86UE3 836 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 BPIFA4PQ86YQ2 179 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 OR10P1Q8NGE3 313 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 SMIM8Q96KF7 97 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 SCRT2Q9NQ03 307 aa6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 ZNF331Q9NQX6 463 aaPredicted RBP6.17□□□□□ -1.42
CDC42SE2-212ENST00000515533 HERC1Q15751 4861 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 A0A1W2PPQ1 181 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 GAGE12BA1L429 117 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 C9orf170A2RU37 121 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 DIRC3C9JPN6 131 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 FNDC10F2Z333 226 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 J3KRW8 73 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 K7EPK0 472 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 ZNF701M0R085 212 aaPredicted RBP6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 MRPS12O15235 138 aaKnown RBP6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 COX7A2P2O60397 106 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 CCNKO75909 580 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 GAGE7O76087 117 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 SNRPCP09234 159 aaKnown RBP6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 GAGE12FP0CL80 117 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 GAGE12GP0CL81 117 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 GAGE12IP0CL82 117 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 INPP1P49441 399 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 GFI1BQ5VTD9 330 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 TMEM14EPQ6UXP3 125 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 PATE2Q6UY27 113 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 UPK3BQ9BT76 320 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 PARD6GQ9BYG4 376 aaPredicted RBP6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 KRTAP1-5Q9BYS1 174 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 V9GYH0 126 aa6.16□□□□□ -1.42
CDC42SE2-212ENST00000515533 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms