RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 OR1S2Q8NGQ3 325 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 NPIPB3Q92617 1050 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 GGACTQ9BVM4 153 aa7.21□□□□□ -1.26
NEDD9-215ENST00000514660 IGKV1D-37A0A075B6S9 117 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 IGKV1OR2-108A0A075B7D4 117 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 FNDC10F2Z333 226 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 DEFB130BP0DP73 79 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 DEFB130AP0DP74 79 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 RND2P52198 227 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 KRTAP10-4P60372 401 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-215ENST00000514660 NUTF2P61970 127 aaKnown RBP7.2□□□□□ -1.26
NEDD9-215ENST00000514660 HBG1P69891 147 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 HBG2P69892 147 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 TTC32Q5I0X7 151 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 C16orf54Q6UWD8 224 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 TMEM144Q7Z5S9 345 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 OR4X1Q8NH49 305 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 PPP1R14BQ96C90 147 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 UPK3BQ9BT76 320 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 TMEM147Q9BVK8 224 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 NPVFQ9HCQ7 196 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 LRP2P98164 4655 aa7.2□□□□□ -1.26
NEDD9-215ENST00000514660 A0A087WTM6 91 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 A0A1W2PPQ1 181 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 ZNF705GA8MUZ8 300 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-215ENST00000514660 CLN5O75503 358 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 HBE1P02100 147 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 HNRNPCP07910 306 aaKnown RBP eCLIP7.19□□□□□ -1.26
NEDD9-215ENST00000514660 OPCMLQ14982 345 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 RPL7L1Q6DKI1 246 aaKnown RBP7.19□□□□□ -1.26
NEDD9-215ENST00000514660 THAP8Q8NA92 274 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 ACY3Q96HD9 319 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 SLC35E1Q96K37 410 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 ATP5SQ99766 215 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 ARL6Q9H0F7 186 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 TMEM231Q9H6L2 316 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 UQCC1Q9NVA1 299 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 WDR83OSQ9Y284 106 aa7.19□□□□□ -1.26
NEDD9-215ENST00000514660 A0A1W2PS18 150 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 SMCO3A2RU48 225 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 F6UB75 175 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 TAAR5O14804 337 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 BCL2L11O43521 198 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 IGKV1-17P01599 117 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 IGLC1P0CG04 106 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 AZU1P20160 251 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 GCSHP23434 173 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 NPBWR1P48145 328 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 RRN3P1Q2M238 152 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 TIGITQ495A1 244 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 TMEM182Q6ZP80 229 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-215ENST00000514660 MGST2Q99735 147 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 ARPC5LQ9BPX5 153 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 WDR61Q9GZS3 305 aaKnown RBP7.18□□□□□ -1.26
NEDD9-215ENST00000514660 ARV1Q9H2C2 271 aa7.18□□□□□ -1.26
NEDD9-215ENST00000514660 UBE2L5PA0A1B0GUS4 154 aa7.17□□□□□ -1.26
NEDD9-215ENST00000514660 LINC00869P0C866 280 aa7.17□□□□□ -1.26
NEDD9-215ENST00000514660 OR10J1P30954 320 aa7.17□□□□□ -1.26
NEDD9-215ENST00000514660 ZNF90Q03938 601 aa7.17□□□□□ -1.26
NEDD9-215ENST00000514660 AKR1C1Q04828 323 aa7.17□□□□□ -1.26
NEDD9-215ENST00000514660 TEPPQ6URK8 271 aa7.17□□□□□ -1.26
NEDD9-215ENST00000514660 METTL26Q96S19 204 aa7.17□□□□□ -1.26
NEDD9-215ENST00000514660 TRGV9Q99603 122 aa7.17□□□□□ -1.26
NEDD9-215ENST00000514660 PARD6GQ9BYG4 376 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-215ENST00000514660 SAV1Q9H4B6 383 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-215ENST00000514660 SLC45A2Q9UMX9 530 aa7.17□□□□□ -1.26
NEDD9-215ENST00000514660 TRAV30A0A087WSZ9 112 aa7.16□□□□□ -1.26
NEDD9-215ENST00000514660 KANTRA0A1W2PQU2 76 aa7.16□□□□□ -1.26
NEDD9-215ENST00000514660 AGPAT2O15120 278 aa7.16□□□□□ -1.26
NEDD9-215ENST00000514660 IFNA5P01569 189 aa7.16□□□□□ -1.26
NEDD9-215ENST00000514660 FGF7P21781 194 aa7.16□□□□□ -1.26
NEDD9-215ENST00000514660 GATA2P23769 480 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-215ENST00000514660 ERVFC1-1P60608 527 aa7.16□□□□□ -1.26
NEDD9-215ENST00000514660 YPEL3P61236 119 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-215ENST00000514660 SCGB1C1Q8TD33 95 aa7.16□□□□□ -1.26
NEDD9-215ENST00000514660 MRPS16Q9Y3D3 137 aaKnown RBP7.16□□□□□ -1.26
NEDD9-215ENST00000514660 BORCS7-ASMTA0A0B4J1R7 106 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 ZFP92A6NM28 416 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 LYRM9A8MSI8 78 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 CRXO43186 299 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-215ENST00000514660 ATP6V0CP27449 155 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 CAMLGP49069 296 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 MIC13Q5XKP0 118 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 AMTNQ6UX39 209 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 CYP2G1PQ6ZSU1 146 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 HSD17B11Q8NBQ5 300 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 OR4B1Q8NGF8 309 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 DEFB104AQ8WTQ1 72 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 CLUHP3Q96NS8 147 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 RSG1Q9BU20 258 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 ZNF471Q9BX82 626 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-215ENST00000514660 NPCDR1Q9BY65 106 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 NRN1Q9NPD7 142 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 GOLT1BQ9Y3E0 138 aa7.15□□□□□ -1.26
NEDD9-215ENST00000514660 A0A0J9YY99 117 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 SOCS3O14543 225 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 MPDU1O75352 247 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 TOMM40O96008 361 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 CFDP00746 253 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-215ENST00000514660 ATP5G1P05496 136 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms