RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 MAPK1IP1LQ8NDC0 245 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 GAGE5Q13069 117 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 GAGE6Q13070 117 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 NPFFO15130 113 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 PPIFP30405 207 aaKnown RBP10.57□□□□□ -0.72
TCOF1-213ENST00000514442 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 PMS2P5A8MQ11 134 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 H3BMG7 143 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 C5orf64Q2M2E5 130 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 ZC2HC1BQ5TFG8 222 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 C8orf46Q8TAG6 207 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 PPDPFLQ8WWR9 84 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 SIGLEC9Q9Y336 463 aa10.57□□□□□ -0.72
TCOF1-213ENST00000514442 ZNF815PA8K554 130 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 PAX8Q06710 450 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 DUX3Q96PT4 197 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 A0A1W2PNU3 283 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-213ENST00000514442 K7ERJ3 54 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 EXOC3-AS1Q8N2X6 119 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 B4DSR2 109 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 DKK1O94907 266 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 FRMD6-AS1P0C7T7 363 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 DOCK10Q96BY6 2186 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 M0R1W7 72 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 ZNF562Q6V9R5 426 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 ZGRF1Q86YA3 2104 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 MED13LQ71F56 2210 aa10.56□□□□□ -0.72
TCOF1-213ENST00000514442 MINOS1Q5TGZ0 78 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 RUSC1-AS1Q66K80 236 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 MINOS1-NBL1R4GNA1 71 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 CEND1Q8N111 149 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 CITED1Q99966 193 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 CNTFRP26992 372 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 SAA4P35542 130 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 LYZL1Q6UWQ5 148 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 LINC00173Q6ZV60 143 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 NCR2O95944 276 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 IGLV1-44P01699 117 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 SRSF1Q07955 248 aaKnown RBP eCLIP10.55□□□□□ -0.72
TCOF1-213ENST00000514442 TMEM190Q8WZ59 177 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 GTF3C1Q12789 2109 aa10.55□□□□□ -0.72
TCOF1-213ENST00000514442 EVI2AP22794 236 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 DSCR9P59020 149 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 ZNF747Q9BV97 191 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 IGKV2-40A0A087WW87 121 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-213ENST00000514442 IGKV2D-40P01614 121 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-213ENST00000514442 NDPQ00604 133 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 C19orf54Q5BKX5 351 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 SVIPQ8NHG7 77 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 KIR2DL4Q99706 377 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 ARMS2P0C7Q2 107 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 LINC01545Q5VT33 79 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 SLC50A1Q9BRV3 221 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 SLC25A39Q9BZJ4 359 aaPredicted RBP10.54□□□□□ -0.72
TCOF1-213ENST00000514442 PLNP26678 52 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 TMEM170BQ5T4T1 132 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 ASPHD1Q5U4P2 390 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 GRNP28799 593 aaKnown RBP10.54□□□□□ -0.72
TCOF1-213ENST00000514442 LINC01587Q99440 93 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 KLF12Q9Y4X4 402 aa10.54□□□□□ -0.72
TCOF1-213ENST00000514442 TRAV8-1A0A0A6YYK1 113 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 B5MCH6 92 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 IGHV4-39P01824 125 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 PRSS2P07478 247 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 RNASE2P10153 161 aaKnown RBP10.53□□□□□ -0.72
TCOF1-213ENST00000514442 Q86TA4 180 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 PEMTQ9UBM1 199 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 GATA4P43694 442 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 IGFL4Q6B9Z1 124 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 CFAP161Q6P656 301 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 FABP5P3A8MUU1 101 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 NSUN5P1Q3KNT7 163 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 TMEM155Q4W5P6 130 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 DOPEY2Q9Y3R5 2298 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 C17orf58Q2M2W7 97 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 Q6ZSR3 168 aa10.53□□□□□ -0.72
TCOF1-213ENST00000514442 CD7P09564 240 aa10.52□□□□□ -0.72
TCOF1-213ENST00000514442 SIGLEC15Q6ZMC9 328 aa10.52□□□□□ -0.72
TCOF1-213ENST00000514442 SH2D6Q7Z4S9 175 aa10.52□□□□□ -0.72
TCOF1-213ENST00000514442 AMN1Q8IY45 258 aa10.52□□□□□ -0.72
TCOF1-213ENST00000514442 Q8TCH9 128 aa10.52□□□□□ -0.72
TCOF1-213ENST00000514442 ADAMTS9Q9P2N4 1935 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 C2orf70A6NJV1 201 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 LAGE3Q14657 143 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 TAL2Q16559 108 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 SP5Q6BEB4 398 aaPredicted RBP10.52□□□□□ -0.73
TCOF1-213ENST00000514442 OBSL1O75147 1896 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 A0A1W2PPI3 338 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 NPIPB5A8MRT5 1133 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 OOSP1A8MZH6 123 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 RNF223E7ERA6 249 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 AMTNQ6UX39 209 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 RNF5Q99942 180 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 C1QTNF4Q9BXJ3 329 aa10.52□□□□□ -0.73
TCOF1-213ENST00000514442 IFITM1P13164 125 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 LOXP28300 417 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-213ENST00000514442 PAPPA-AS1Q5QFB9 102 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 LCNL1Q6ZST4 164 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 RNF138Q8WVD3 245 aa10.51□□□□□ -0.73
TCOF1-213ENST00000514442 CFHR2P36980 270 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms