RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 THAP6Q8TBB0 222 aa6.22□□□□□ -1.41
HERC4-214ENST00000513996 LRRC20Q8TCA0 184 aa6.22□□□□□ -1.41
HERC4-214ENST00000513996 RPUSD4Q96CM3 377 aaKnown RBP6.22□□□□□ -1.41
HERC4-214ENST00000513996 ZNF586Q9NXT0 402 aa6.22□□□□□ -1.41
HERC4-214ENST00000513996 DKK2Q9UBU2 259 aa6.22□□□□□ -1.41
HERC4-214ENST00000513996 GOLT1BQ9Y3E0 138 aa6.22□□□□□ -1.41
HERC4-214ENST00000513996 RFNGQ9Y644 331 aa6.22□□□□□ -1.41
HERC4-214ENST00000513996 PXMP4Q9Y6I8 212 aa6.22□□□□□ -1.41
HERC4-214ENST00000513996 IGHV4-4A0A075B6R2 117 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 LOC102723971A0A1B0GUV8 181 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 E5RGE8 158 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 BOLA2-SMG1P6H3BVE0 249 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 HBE1P02100 147 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 RLN2P04090 185 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 SPART-AS1P0CW21 52 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 CXCL2P19875 107 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 RHOBP62745 196 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 HBG1P69891 147 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 HBG2P69892 147 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 RRN3P1Q2M238 152 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 XP32Q5T750 250 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 FAM222AQ5U5X8 452 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 LCN15Q6UWW0 184 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 OR5C1Q8NGR4 320 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 OR1L4Q8NGR5 311 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 SVIPQ8NHG7 77 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 PPP1R1CQ8WVI7 109 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 SLC50A1Q9BRV3 221 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 NPCDR1Q9BY65 106 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 PARD6GQ9BYG4 376 aaPredicted RBP6.21□□□□□ -1.42
HERC4-214ENST00000513996 RNF24Q9Y225 148 aa6.21□□□□□ -1.42
HERC4-214ENST00000513996 YTHDF2Q9Y5A9 579 aaKnown RBP6.21□□□□□ -1.42
HERC4-214ENST00000513996 PLAC8L1A1L4L8 177 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 TMEM189A5PLL7 270 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 NDUFB4O95168 129 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 MPC2O95563 127 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 AMBPP02760 352 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 TCTAP57738 103 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 CYCSP99999 105 aaKnown RBP6.2□□□□□ -1.42
HERC4-214ENST00000513996 CLINT1Q14677 625 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 FCN2Q15485 313 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 MIR17HGQ75NE6 70 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 FAM167A-AS1Q96KT0 104 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 PFDN5Q99471 154 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 SLC25A31Q9H0C2 315 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 DNAH6Q9C0G6 4158 aa6.2□□□□□ -1.42
HERC4-214ENST00000513996 DNAH10Q8IVF4 4471 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 TRBV19A0A075B6N1 114 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 M0R3E3 92 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 SSNA1O43805 119 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 MPDU1O75352 247 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 INSP01308 110 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 PYYP10082 97 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 LINC01587Q99440 93 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 NIPSNAP3BQ9BS92 247 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 TMEM208Q9BTX3 173 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 SLC25A2Q9BXI2 301 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 WDR61Q9GZS3 305 aaKnown RBP6.19□□□□□ -1.42
HERC4-214ENST00000513996 WFDC1Q9HC57 220 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 TMEM14CQ9P0S9 112 aa6.19□□□□□ -1.42
HERC4-214ENST00000513996 CT45A10P0DMU9 189 aa6.18□□□□□ -1.42
HERC4-214ENST00000513996 HIST1H1EP10412 219 aaKnown RBP6.18□□□□□ -1.42
HERC4-214ENST00000513996 CDKN1BP46527 198 aa6.18□□□□□ -1.42
HERC4-214ENST00000513996 ERCC8Q13216 396 aa6.18□□□□□ -1.42
HERC4-214ENST00000513996 GUK1Q16774 197 aa6.18□□□□□ -1.42
HERC4-214ENST00000513996 BLNKQ8WV28 456 aa6.18□□□□□ -1.42
HERC4-214ENST00000513996 ARPC5LQ9BPX5 153 aa6.18□□□□□ -1.42
HERC4-214ENST00000513996 SMIM3Q9BZL3 60 aa6.18□□□□□ -1.42
HERC4-214ENST00000513996 MBD2Q9UBB5 411 aa6.18□□□□□ -1.42
HERC4-214ENST00000513996 HSPB11Q9Y547 144 aa6.18□□□□□ -1.42
HERC4-214ENST00000513996 ALG5Q9Y673 324 aa6.18□□□□□ -1.42
HERC4-214ENST00000513996 NPIPB6E9PJ23 425 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 ZNF253O75346 499 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 EIF3GO75821 320 aaKnown RBP eCLIP6.17□□□□□ -1.42
HERC4-214ENST00000513996 HTN1P15515 57 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 HTN3P15516 51 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 RPL12P30050 165 aaKnown RBP6.17□□□□□ -1.42
HERC4-214ENST00000513996 TSPOP30536 169 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 TAS2R60P59551 318 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 EXOC3-AS1Q8N2X6 119 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 OR10J6PQ8NGY7 276 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 ZNF503Q96F45 646 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 ATP5SQ99766 215 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 AGPAT4-IT1Q9H0P7 198 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 PPP1R14DQ9NXH3 145 aa6.17□□□□□ -1.42
HERC4-214ENST00000513996 A0A1B0GVG6 124 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 J3KRW8 73 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 RGS13O14921 159 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 NBEAP1P0C6P0 100 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 DAD1P61803 113 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 Q5BKY6 102 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 GFI1BQ5VTD9 330 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 TMEM256Q8N2U0 113 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 FXYD5Q96DB9 178 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 MRPL53Q96EL3 112 aaKnown RBP6.16□□□□□ -1.42
HERC4-214ENST00000513996 NDUFAF3Q9BU61 184 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 OR51M1Q9H341 326 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 TIMM9Q9Y5J7 89 aa6.16□□□□□ -1.42
HERC4-214ENST00000513996 TRAV12-3A0A0B4J271 114 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 TEX48A0A1B0GUV7 120 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms