RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 NDUFB4O95168 129 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 ARL14EPLP0DKL9 152 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 HIST1H1EP10412 219 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 TPT1P13693 172 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 FGF8P55075 233 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 FXYD7P58549 80 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 SERF2P84101 59 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 HAGHQ16775 308 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 LINC00322Q6ZN03 302 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 STHQ8IWL8 128 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 IQCF2Q8IXL9 164 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 EXOC3-AS1Q8N2X6 119 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 SAT2Q96F10 170 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 B9D2Q9BPU9 175 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 FAM110AQ9BQ89 295 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 RNF24Q9Y225 148 aa7.22□□□□□ -1.25
TOPBP1-209ENST00000513818 A0A1B0GV50 99 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 PRAC2D3DTV9 90 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 MBP02144 154 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 C4BPBP20851 252 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 MALP21145 153 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 TAS2R45P59539 299 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 FAM74A1Q5RGS3 127 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 TRPT1Q86TN4 253 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 BAP18Q8IXM2 172 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 STOML3Q8TAV4 291 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 FAM213BQ8TBF2 198 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 SLC50A1Q9BRV3 221 aa7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 ACTR3CQ9C0K3 210 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-209ENST00000513818 CTXND1A0A1B0GTU2 59 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 H3BMM0 161 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 UBE2CO00762 179 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 NBEAP1P0C6P0 100 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 STAG3L2P0CL84 134 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 STAG3L3P0CL85 134 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 HLA-DRB4P13762 266 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 GCHFRP30047 84 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 CMC4P56277 68 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 HIST1H1AQ02539 215 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 ICAM4Q14773 271 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 PSG3Q16557 428 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 DEFB135Q30KP9 77 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 SAMD13Q5VXD3 122 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 FOXI2Q6ZQN5 318 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 OR4B1Q8NGF8 309 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 RPUSD4Q96CM3 377 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 SAV1Q9H4B6 383 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 HLA-DRB4X5D2U9 266 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 TGP01266 2768 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
TOPBP1-209ENST00000513818 NBEAL2Q6ZNJ1 2754 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 A0A0J9YX75 114 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 MAP1LC3B2A6NCE7 125 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 CA1P00915 261 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 SEC11BP0C7V7 166 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 CNN1P51911 297 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 RANP62826 216 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 EIF5AP63241 154 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 GUK1Q16774 197 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 EBLN2Q6P2I7 272 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 SLC51BQ86UW2 128 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 MAP1LC3BQ9GZQ8 125 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 SLC35B3Q9H1N7 401 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 Q9H3A6 140 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 TMPRSS5Q9H3S3 457 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 CLEC5AQ9NY25 188 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 RPH3ALQ9UNE2 315 aa7.19□□□□□ -1.26
TOPBP1-209ENST00000513818 IGKV2-40A0A087WW87 121 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-209ENST00000513818 ZNF253O75346 499 aa7.18□□□□□ -1.26
TOPBP1-209ENST00000513818 IGKV2D-40P01614 121 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-209ENST00000513818 GIG44P09565 113 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-209ENST00000513818 APOC4P55056 127 aa7.18□□□□□ -1.26
TOPBP1-209ENST00000513818 UBE2G2P60604 165 aa7.18□□□□□ -1.26
TOPBP1-209ENST00000513818 PQLC2Q6ZP29 291 aa7.18□□□□□ -1.26
TOPBP1-209ENST00000513818 OR8A1Q8NGG7 326 aa7.18□□□□□ -1.26
TOPBP1-209ENST00000513818 TM2D3Q9BRN9 247 aa7.18□□□□□ -1.26
TOPBP1-209ENST00000513818 AAMDCQ9H7C9 122 aa7.18□□□□□ -1.26
TOPBP1-209ENST00000513818 M0R2Z0 102 aa7.17□□□□□ -1.26
TOPBP1-209ENST00000513818 CXorf1O96002 111 aa7.17□□□□□ -1.26
TOPBP1-209ENST00000513818 GNG5P63218 68 aa7.17□□□□□ -1.26
TOPBP1-209ENST00000513818 PSG9Q00887 426 aa7.17□□□□□ -1.26
TOPBP1-209ENST00000513818 ERCC8Q13216 396 aa7.17□□□□□ -1.26
TOPBP1-209ENST00000513818 PDE6HQ13956 83 aa7.17□□□□□ -1.26
TOPBP1-209ENST00000513818 ALKAL2Q6UX46 152 aa7.17□□□□□ -1.26
TOPBP1-209ENST00000513818 CSTL1Q9H114 145 aa7.17□□□□□ -1.26
TOPBP1-209ENST00000513818 XCL2Q9UBD3 114 aa7.17□□□□□ -1.26
TOPBP1-209ENST00000513818 GGTLC3B5MD39 225 aa7.16□□□□□ -1.26
TOPBP1-209ENST00000513818 UMAD1C9J7I0 102 aa7.16□□□□□ -1.26
TOPBP1-209ENST00000513818 SPINK13Q1W4C9 94 aa7.16□□□□□ -1.26
TOPBP1-209ENST00000513818 AMTNQ6UX39 209 aa7.16□□□□□ -1.26
TOPBP1-209ENST00000513818 Q8TAT8 98 aa7.16□□□□□ -1.26
TOPBP1-209ENST00000513818 SFT2D1Q8WV19 159 aa7.16□□□□□ -1.26
TOPBP1-209ENST00000513818 RCHY1Q96PM5 261 aa7.16□□□□□ -1.26
TOPBP1-209ENST00000513818 SPATA25Q9BR10 227 aa7.16□□□□□ -1.26
TOPBP1-209ENST00000513818 YTHDF2Q9Y5A9 579 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-209ENST00000513818 TRAV12-2A0A075B6T6 113 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 KIR2DL5BA0A0G2JN68 375 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 KIR2DL5BA0A0G2JPC4 375 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 PGPA6NDG6 321 aa7.15□□□□□ -1.26
TOPBP1-209ENST00000513818 DUSP14O95147 198 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms