RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 PPP1R2P9O14990 202 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 GGCTO75223 188 aaKnown RBP7.42□□□□□ -1.22
CCL28-203ENST00000513525 IGHV3-48P01763 117 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 HIST1H1BP16401 226 aaKnown RBP7.42□□□□□ -1.22
CCL28-203ENST00000513525 UBE2L3P68036 154 aaKnown RBP7.42□□□□□ -1.22
CCL28-203ENST00000513525 CASC10Q5T4H9 136 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 ADAMTSL5Q6ZMM2 481 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 LINC01551Q86U37 167 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 CCDC140Q96MF4 163 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 PAXXQ9BUH6 204 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 THYN1Q9P016 225 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 FBXL7Q9UJT9 491 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 IGLV11-55A0A075B6I3 123 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 TRBV24-1A0A075B6N3 115 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 PPP5D1E7EU14 171 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 H7BYZ3 331 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 SCGB2A1O75556 95 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 C19orf35Q6ZS72 473 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 LINC00305Q7Z4B0 112 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 S100A7AQ86SG5 101 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 GPHB5Q86YW7 130 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 Q8WTZ3 238 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 SPATA25Q9BR10 227 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 OR51M1Q9H341 326 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 BIN3Q9NQY0 253 aa7.42□□□□□ -1.22
CCL28-203ENST00000513525 C2orf70A6NJV1 201 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 A8MWP6 167 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 NDUFB8O95169 186 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 IGKV1-17P01599 117 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 ORM2P19652 201 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 S100PP25815 95 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 YPEL3P61236 119 aaPredicted RBP7.41□□□□□ -1.22
CCL28-203ENST00000513525 CD300EQ496F6 205 aaPredicted RBP7.41□□□□□ -1.22
CCL28-203ENST00000513525 MORN5Q5VZ52 161 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 OR1B1Q8NGR6 318 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 EEF1AKMT3Q96AZ1 226 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 BTF3L4Q96K17 158 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 IMMP2LQ96T52 175 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 EDA2RQ9HAV5 297 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 HIGD1AQ9Y241 93 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 SACSQ9NZJ4 4579 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 TENM2Q9NT68 2774 aa7.41□□□□□ -1.22
CCL28-203ENST00000513525 TRBV7-1A0A0A6YYK4 115 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 TRAV5A0A0B4J249 113 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 ZNF785A8K8V0 405 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 GGTLC3B5MD39 225 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 TOMM40O96008 361 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 PFN1P07737 140 aaKnown RBP7.4□□□□□ -1.22
CCL28-203ENST00000513525 OR10J4P0C629 311 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 RD3LP0DJH9 198 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 PSG1P11464 419 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 FCGR2BP31994 310 aaPredicted RBP7.4□□□□□ -1.22
CCL28-203ENST00000513525 ARL3P36405 182 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 MFAP4P55083 255 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 DEFB114Q30KQ6 69 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 TIGITQ495A1 244 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 CLEC19AQ6UXS0 136 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 LINC00322Q6ZN03 302 aaPredicted RBP7.4□□□□□ -1.22
CCL28-203ENST00000513525 DYNLRB2Q8TF09 96 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 FXYD5Q96DB9 178 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 FAM210BQ96KR6 192 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 TXN2Q99757 166 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 PYGO2Q9BRQ0 406 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 DERL1Q9BUN8 251 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 TMEM14CQ9P0S9 112 aa7.4□□□□□ -1.22
CCL28-203ENST00000513525 TRBV20OR9-2A0A075B6H5 130 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 IGHV3-21A0A0B4J1V1 117 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 HELTA6NFD8 242 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 CXCL1P09341 107 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 RPL35P42766 123 aaKnown RBP7.39□□□□□ -1.23
CCL28-203ENST00000513525 RPS10P46783 165 aaKnown RBP7.39□□□□□ -1.23
CCL28-203ENST00000513525 GALR1P47211 349 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 TAS2R60P59551 318 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 SUMO1P63165 101 aaKnown RBP7.39□□□□□ -1.23
CCL28-203ENST00000513525 KCNIP4Q6PIL6 250 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 C2CD4CQ8TF44 421 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 MRPL27Q9P0M9 148 aaKnown RBP7.39□□□□□ -1.23
CCL28-203ENST00000513525 RNF24Q9Y225 148 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 URGCP-MRPS24S4R325 110 aa7.39□□□□□ -1.23
CCL28-203ENST00000513525 RYR2Q92736 4967 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 TGIF2-C20orf24A0A0A6YYL0 155 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 TMEM213A2RRL7 107 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 IGHV3-23P01764 117 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 CD7P09564 240 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 PYYP10082 97 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 EDN2P20800 178 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 CBLN1P23435 193 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 CRYBB3P26998 211 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 LYZP61626 148 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 FAM106AQ4KMX7 169 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 ZNF502Q8TBZ5 544 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 SFRP2Q96HF1 295 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 SHANK2-AS3Q9BTD1 123 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 C21orf62Q9NYP8 219 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 S4R3C0 116 aa7.38□□□□□ -1.23
CCL28-203ENST00000513525 GNG7O60262 68 aa7.37□□□□□ -1.23
CCL28-203ENST00000513525 S100A9P06702 114 aaKnown RBP7.37□□□□□ -1.23
CCL28-203ENST00000513525 S100A6P06703 90 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms