RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	NKX6-2	Q9C056	277 aa	Predicted RBP	11.68	□□□□□ -0.54
SH3TC1-223	ENST00000513495	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.67	□□□□□ -0.54
SH3TC1-223	ENST00000513495	TRAV1-1	A0A0B4J248	108 aa		11.67	□□□□□ -0.54
SH3TC1-223	ENST00000513495		A0A1B0GV50	99 aa		11.67	□□□□□ -0.54
SH3TC1-223	ENST00000513495	NUTF2	P61970	127 aa	Known RBP	11.67	□□□□□ -0.54
SH3TC1-223	ENST00000513495	SAV1	Q9H4B6	383 aa	Predicted RBP	11.67	□□□□□ -0.54
SH3TC1-223	ENST00000513495	PPP1R14D	Q9NXH3	145 aa		11.67	□□□□□ -0.54
SH3TC1-223	ENST00000513495	CMYA5	Q8N3K9	4069 aa		11.67	□□□□□ -0.54
SH3TC1-223	ENST00000513495		A0A1W2PRE2	83 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	PGP	A6NDG6	321 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	KNCN	A6PVL3	124 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	IFNA1	P01562	189 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	HLA-DRB4	P13762	266 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	HLA-DMB	P28068	263 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	APOC4	P55056	127 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	HIST1H1A	Q02539	215 aa	Predicted RBP	11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	ZNF124	Q15973	351 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	TMPRSS5	Q9H3S3	457 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	ARL2-SNX15	V9GYD0	113 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495	HLA-DRB4	X5D2U9	266 aa		11.66	□□□□□ -0.54
SH3TC1-223	ENST00000513495		A0A0J9YX75	114 aa		11.65	□□□□□ -0.54
SH3TC1-223	ENST00000513495		K7EQM0	130 aa		11.65	□□□□□ -0.54
SH3TC1-223	ENST00000513495	SLC25A5	P05141	298 aa	Known RBP	11.65	□□□□□ -0.54
SH3TC1-223	ENST00000513495	FRMD6-AS1	P0C7T7	363 aa		11.65	□□□□□ -0.54
SH3TC1-223	ENST00000513495	UBE2G2	P60604	165 aa		11.65	□□□□□ -0.54
SH3TC1-223	ENST00000513495	ARL6IP6	Q8N6S5	226 aa		11.65	□□□□□ -0.54
SH3TC1-223	ENST00000513495	ZNF680	Q8NEM1	530 aa		11.65	□□□□□ -0.54
SH3TC1-223	ENST00000513495	OR4B1	Q8NGF8	309 aa		11.65	□□□□□ -0.54
SH3TC1-223	ENST00000513495	OR8A1	Q8NGG7	326 aa		11.65	□□□□□ -0.54
SH3TC1-223	ENST00000513495	MANBAL	Q9NQG1	85 aa		11.65	□□□□□ -0.54
SH3TC1-223	ENST00000513495	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.64	□□□□□ -0.55
SH3TC1-223	ENST00000513495		H3BMM0	161 aa		11.64	□□□□□ -0.55
SH3TC1-223	ENST00000513495		M0R3E3	92 aa		11.64	□□□□□ -0.55
SH3TC1-223	ENST00000513495	RPL35A	P18077	110 aa	Known RBP	11.64	□□□□□ -0.55
SH3TC1-223	ENST00000513495	CST9LP1	Q5W188	147 aa		11.64	□□□□□ -0.55
SH3TC1-223	ENST00000513495	MORN3	Q6PF18	240 aa	Predicted RBP	11.64	□□□□□ -0.55
SH3TC1-223	ENST00000513495	C5orf17	Q8NAS9	161 aa		11.64	□□□□□ -0.55
SH3TC1-223	ENST00000513495	CITED4	Q96RK1	184 aa		11.64	□□□□□ -0.55
SH3TC1-223	ENST00000513495	KIR2DL5B	A0A0G2JN68	375 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	KIR2DL5B	A0A0G2JPC4	375 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	SERTM2	A0A1B0GWG4	89 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495		F6UB75	175 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495		F6UZH7	168 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	TAGLN2	P37802	199 aa	Known RBP	11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	RAB14	P61106	215 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	SUMO1	P63165	101 aa	Known RBP	11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	TRPT1	Q86TN4	253 aa	Known RBP	11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	KIR2DL5A	Q8N109	375 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	KIR2DL5B	Q8NHK3	375 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	CLUHP3	Q96NS8	147 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	GNG13	Q9P2W3	67 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	RPH3AL	Q9UNE2	315 aa		11.63	□□□□□ -0.55
SH3TC1-223	ENST00000513495	FAM74A7	A6NL05	159 aa		11.62	□□□□□ -0.55
SH3TC1-223	ENST00000513495	UBE2C	O00762	179 aa		11.62	□□□□□ -0.55
SH3TC1-223	ENST00000513495	IGKV3-20	P01619	116 aa		11.62	□□□□□ -0.55
SH3TC1-223	ENST00000513495	CNN1	P51911	297 aa	Known RBP	11.62	□□□□□ -0.55
SH3TC1-223	ENST00000513495	TMEM78	Q5T7P6	136 aa		11.62	□□□□□ -0.55
SH3TC1-223	ENST00000513495	GDF5OS	Q5U4N7	250 aa		11.62	□□□□□ -0.55
SH3TC1-223	ENST00000513495	TCEAL7	Q9BRU2	100 aa		11.62	□□□□□ -0.55
SH3TC1-223	ENST00000513495	C1QTNF4	Q9BXJ3	329 aa		11.62	□□□□□ -0.55
SH3TC1-223	ENST00000513495	RBAKDN	A6NC62	111 aa		11.61	□□□□□ -0.55
SH3TC1-223	ENST00000513495	RBMY1B	A6NDE4	496 aa	Known RBP	11.61	□□□□□ -0.55
SH3TC1-223	ENST00000513495	RBMY1E	A6NEQ0	496 aa	Known RBP	11.61	□□□□□ -0.55
SH3TC1-223	ENST00000513495	PAGE4	O60829	102 aa		11.61	□□□□□ -0.55
SH3TC1-223	ENST00000513495	RBMY1D	P0C7P1	496 aa	Known RBP	11.61	□□□□□ -0.55
SH3TC1-223	ENST00000513495	DEFB1	P60022	68 aa		11.61	□□□□□ -0.55
SH3TC1-223	ENST00000513495	TXNDC17	Q9BRA2	123 aa		11.61	□□□□□ -0.55
SH3TC1-223	ENST00000513495	CSTL1	Q9H114	145 aa		11.61	□□□□□ -0.55
SH3TC1-223	ENST00000513495	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.61	□□□□□ -0.55
SH3TC1-223	ENST00000513495	GGTLC3	B5MD39	225 aa		11.6	□□□□□ -0.55
SH3TC1-223	ENST00000513495	DIRC3	C9JPN6	131 aa		11.6	□□□□□ -0.55
SH3TC1-223	ENST00000513495	AMBP	P02760	352 aa		11.6	□□□□□ -0.55
SH3TC1-223	ENST00000513495	ZNF705D	P0CH99	300 aa	Predicted RBP	11.6	□□□□□ -0.55
SH3TC1-223	ENST00000513495	ZNF705B	P0CI00	300 aa	Predicted RBP	11.6	□□□□□ -0.55
SH3TC1-223	ENST00000513495	TSPO	P30536	169 aa		11.6	□□□□□ -0.55
SH3TC1-223	ENST00000513495	ZNF767P	Q75MW2	155 aa		11.6	□□□□□ -0.55
SH3TC1-223	ENST00000513495	LINC00477	Q96M19	166 aa		11.6	□□□□□ -0.55
SH3TC1-223	ENST00000513495	ATG101	Q9BSB4	218 aa		11.6	□□□□□ -0.55
SH3TC1-223	ENST00000513495	EPDR1	Q9UM22	224 aa		11.6	□□□□□ -0.55
SH3TC1-223	ENST00000513495	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	FBLL1	A6NHQ2	334 aa	Known RBP	11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	C11orf94	C9JXX5	98 aa		11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	PRAC2	D3DTV9	90 aa		11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	NPIPB6	E9PJ23	425 aa		11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	CA1	P00915	261 aa	Predicted RBP	11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	IGKV2D-40	P01614	121 aa	Predicted RBP	11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	CCL20	P78556	96 aa		11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	PMS2P11	Q13670	270 aa		11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	GOLT1A	Q6ZVE7	132 aa		11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	CYB561D1	Q8N8Q1	229 aa		11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	HIST1H2BA	Q96A08	127 aa		11.59	□□□□□ -0.55
SH3TC1-223	ENST00000513495	TCRA	P04437	139 aa		11.58	□□□□□ -0.56
SH3TC1-223	ENST00000513495	BCL2	P10415	239 aa		11.58	□□□□□ -0.56
SH3TC1-223	ENST00000513495	LEP	P41159	167 aa		11.58	□□□□□ -0.56
SH3TC1-223	ENST00000513495	HAGH	Q16775	308 aa		11.58	□□□□□ -0.56
SH3TC1-223	ENST00000513495	C9orf47	Q6ZRZ4	202 aa		11.58	□□□□□ -0.56
SH3TC1-223	ENST00000513495	ODF3	Q96PU9	254 aa		11.58	□□□□□ -0.56
SH3TC1-223	ENST00000513495	B9D2	Q9BPU9	175 aa		11.58	□□□□□ -0.56
SH3TC1-223	ENST00000513495	AGRN	O00468	2067 aa		11.58	□□□□□ -0.56

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