RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 LINC00158P58513 81 aa13.15□□□□□ -0.3
TRIO-221ENST00000513206 C9orf118A6NHY6 69 aa13.15□□□□□ -0.3
TRIO-221ENST00000513206 IGKV1-12A0A0C4DH73 117 aa13.15□□□□□ -0.3
TRIO-221ENST00000513206 IGKV1D-12P01611 117 aa13.15□□□□□ -0.3
TRIO-221ENST00000513206 IFITM1P13164 125 aa13.15□□□□□ -0.3
TRIO-221ENST00000513206 LAGE3Q14657 143 aa13.15□□□□□ -0.3
TRIO-221ENST00000513206 KLF17Q5JT82 389 aaPredicted RBP13.15□□□□□ -0.3
TRIO-221ENST00000513206 CHTOPQ9Y3Y2 248 aaKnown RBP13.15□□□□□ -0.3
TRIO-221ENST00000513206 F8W1H4 67 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 IGHV3-53P01767 116 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 MRPL27Q9P0M9 148 aaKnown RBP13.14□□□□□ -0.31
TRIO-221ENST00000513206 PRSS47A8MTI9 375 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 SYS1-DBNDD2H3BUS1 97 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 GAFA1Q96PS6 74 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 BMPERQ8N8U9 685 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 CPAMD8Q8IZJ3 1885 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 IGKCP01834 107 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 INSP01308 110 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 TNFRSF6BO95407 300 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 ZNF138P52744 262 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 FBLN5Q9UBX5 448 aa13.14□□□□□ -0.31
TRIO-221ENST00000513206 ACACBO00763 2458 aa13.13□□□□□ -0.31
TRIO-221ENST00000513206 TRAV2A0A0B4J234 112 aa13.13□□□□□ -0.31
TRIO-221ENST00000513206 A0A0U1RRA0 63 aa13.13□□□□□ -0.31
TRIO-221ENST00000513206 CEACAM8P31997 349 aaPredicted RBP13.13□□□□□ -0.31
TRIO-221ENST00000513206 LINC01551Q86U37 167 aa13.13□□□□□ -0.31
TRIO-221ENST00000513206 IFI27L1Q96BM0 104 aa13.13□□□□□ -0.31
TRIO-221ENST00000513206 LINC00477Q96M19 166 aa13.13□□□□□ -0.31
TRIO-221ENST00000513206 AGRNO00468 2067 aa13.13□□□□□ -0.31
TRIO-221ENST00000513206 CDK2AP2O75956 126 aa13.13□□□□□ -0.31
TRIO-221ENST00000513206 NAV3Q8IVL0 2385 aa13.13□□□□□ -0.31
TRIO-221ENST00000513206 PNRC2Q9NPJ4 139 aaKnown RBP13.13□□□□□ -0.31
TRIO-221ENST00000513206 GAGE5Q13069 117 aa13.12□□□□□ -0.31
TRIO-221ENST00000513206 GAGE6Q13070 117 aa13.12□□□□□ -0.31
TRIO-221ENST00000513206 IGKV1D-8A0A087WSZ0 117 aa13.12□□□□□ -0.31
TRIO-221ENST00000513206 RPL36AP83881 106 aaKnown RBP13.12□□□□□ -0.31
TRIO-221ENST00000513206 RPL36ALQ969Q0 106 aaKnown RBP13.12□□□□□ -0.31
TRIO-221ENST00000513206 RNF5Q99942 180 aa13.12□□□□□ -0.31
TRIO-221ENST00000513206 GGTLC1Q9BX51 225 aa13.12□□□□□ -0.31
TRIO-221ENST00000513206 LINC01559Q495D7 138 aa13.12□□□□□ -0.31
TRIO-221ENST00000513206 RUSC1-AS1Q66K80 236 aa13.12□□□□□ -0.31
TRIO-221ENST00000513206 DEFB104AQ8WTQ1 72 aa13.12□□□□□ -0.31
TRIO-221ENST00000513206 COL4A4P53420 1690 aaPredicted RBP13.12□□□□□ -0.31
TRIO-221ENST00000513206 HIVEP2P31629 2446 aa13.11□□□□□ -0.31
TRIO-221ENST00000513206 CLPSP04118 112 aa13.11□□□□□ -0.31
TRIO-221ENST00000513206 DMRTC2Q8IXT2 367 aaPredicted RBP13.11□□□□□ -0.31
TRIO-221ENST00000513206 IGLC2P0DOY2 106 aa13.11□□□□□ -0.31
TRIO-221ENST00000513206 IGLC3P0DOY3 106 aa13.11□□□□□ -0.31
TRIO-221ENST00000513206 SYNJ2BPP57105 145 aa13.11□□□□□ -0.31
TRIO-221ENST00000513206 TSKUQ8WUA8 353 aa13.11□□□□□ -0.31
TRIO-221ENST00000513206 TREML4Q6UXN2 200 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 CITED2Q99967 270 aaPredicted RBP13.1□□□□□ -0.31
TRIO-221ENST00000513206 JPT2Q9H910 190 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 ERCC8Q13216 396 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 J3QKU1 62 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 IGHG3P01860 377 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 LYL1P12980 280 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 SS18L2Q9UHA2 77 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 IGKV1D-17A0A075B6S4 117 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 TRAV3A0A0B4J244 114 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 CCL25O15444 150 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 B3GALT5-AS1P59052 145 aa13.1□□□□□ -0.31
TRIO-221ENST00000513206 C9JQL5 133 aa13.09□□□□□ -0.31
TRIO-221ENST00000513206 NPC2P61916 151 aa13.09□□□□□ -0.31
TRIO-221ENST00000513206 Q6P435 159 aa13.09□□□□□ -0.31
TRIO-221ENST00000513206 BOD1L2Q8IYS8 172 aa13.09□□□□□ -0.31
TRIO-221ENST00000513206 STPG4Q8N801 248 aa13.09□□□□□ -0.31
TRIO-221ENST00000513206 ERG28Q9UKR5 140 aa13.09□□□□□ -0.31
TRIO-221ENST00000513206 MORN3Q6PF18 240 aaPredicted RBP13.09□□□□□ -0.31
TRIO-221ENST00000513206 DAZ1Q9NQZ3 744 aaKnown RBP13.09□□□□□ -0.31
TRIO-221ENST00000513206 NAPSAO96009 420 aa13.08□□□□□ -0.31
TRIO-221ENST00000513206 ZNF876PQ49A33 203 aa13.08□□□□□ -0.31
TRIO-221ENST00000513206 MMP23AO75900 390 aa13.08□□□□□ -0.32
TRIO-221ENST00000513206 Q0VG73 95 aa13.08□□□□□ -0.32
TRIO-221ENST00000513206 MST1LQ2TV78 715 aa13.08□□□□□ -0.32
TRIO-221ENST00000513206 TOMM40O96008 361 aa13.08□□□□□ -0.32
TRIO-221ENST00000513206 ZNF562Q6V9R5 426 aa13.08□□□□□ -0.32
TRIO-221ENST00000513206 SMPXQ9UHP9 88 aa13.08□□□□□ -0.32
TRIO-221ENST00000513206 K7EP34 96 aa13.08□□□□□ -0.32
TRIO-221ENST00000513206 DEFB130BP0DP73 79 aa13.08□□□□□ -0.32
TRIO-221ENST00000513206 DEFB130AP0DP74 79 aa13.08□□□□□ -0.32
TRIO-221ENST00000513206 ID3Q02535 119 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 MYO18BQ8IUG5 2567 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 SPANXCQ9NY87 97 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 CUL9Q8IWT3 2517 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 GATA4P43694 442 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 ATXN8Q156A1 80 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 GFI1Q99684 422 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 CDPF1Q6NVV7 123 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 GGTLC3B5MD39 225 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 IGKV1-16P04430 117 aa13.07□□□□□ -0.32
TRIO-221ENST00000513206 IGHV2-70DA0A0C4DH43 119 aa13.06□□□□□ -0.32
TRIO-221ENST00000513206 C9orf139Q6ZV77 190 aa13.06□□□□□ -0.32
TRIO-221ENST00000513206 SRSF8Q9BRL6 282 aaKnown RBP13.06□□□□□ -0.32
TRIO-221ENST00000513206 B5MCH6 92 aa13.06□□□□□ -0.32
TRIO-221ENST00000513206 RNASE8Q8TDE3 154 aaKnown RBP13.06□□□□□ -0.32
TRIO-221ENST00000513206 GAGE12JA6NER3 117 aa13.06□□□□□ -0.32
TRIO-221ENST00000513206 GAGE7O76087 117 aa13.06□□□□□ -0.32
TRIO-221ENST00000513206 GAGE12FP0CL80 117 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms