RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 LAMTOR3Q9UHA4 124 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 LENEPQ9Y5L5 61 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 IGKV1OR2-108A0A075B7D4 117 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 TRAV1-1A0A0B4J248 108 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 C14orf177Q52M58 125 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 ZNF114Q8NC26 417 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 KLHDC3Q9BQ90 382 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 ERG28Q9UKR5 140 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 IGHV4-38-2P0DP08 117 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 ZNF134P52741 427 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 POU2AF1Q16633 256 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 ZNF492Q9P255 531 aa3.38□□□□□ -1.87
VCAN-209ENST00000513016 H3BRN7 92 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 K7EMT4 169 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 Q8TAT8 98 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 GFRA4Q9GZZ7 299 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 TPRP12270 2363 aaKnown RBP3.37□□□□□ -1.87
VCAN-209ENST00000513016 GAGE6Q13070 117 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 C4orf3Q8WVX3 66 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 AGMATQ9BSE5 352 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 DERL1Q9BUN8 251 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 FNDC1Q4ZHG4 1894 aaPredicted RBP3.37□□□□□ -1.87
VCAN-209ENST00000513016 A0A087WWL8 130 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 F8W735 103 aaPredicted RBP3.37□□□□□ -1.87
VCAN-209ENST00000513016 SFTA2Q6UW10 78 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 Q86TA4 180 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 NPBQ8NG41 125 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 C4orf48Q5BLP8 95 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 C10orf126Q8N4M7 172 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 RNF183Q96D59 192 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 TIMM21Q9BVV7 248 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 SNHG12Q9BXW3 62 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 A0A1B0GV72 72 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 FAM231BA6NCW3 169 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 TNFRSF13BO14836 293 aaPredicted RBP3.37□□□□□ -1.87
VCAN-209ENST00000513016 KLK9Q9UKQ9 250 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 CCDC88CQ9P219 2028 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 TRBV19A0A075B6N1 114 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 RNF222A6NCQ9 220 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 QRFPP83859 136 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 SPATA25Q9BR10 227 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 CARHSP1Q9Y2V2 147 aaKnown RBP3.37□□□□□ -1.87
VCAN-209ENST00000513016 PDCD11Q14690 1871 aaKnown RBP3.37□□□□□ -1.87
VCAN-209ENST00000513016 A0A0U1RRA0 63 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 HILS1P60008 231 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 RNF144BQ7Z419 303 aa3.37□□□□□ -1.87
VCAN-209ENST00000513016 PGPEP1LA6NFU8 196 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 C15orf65H3BRN8 121 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 IGFL4Q6B9Z1 124 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 TICRRQ7Z2Z1 1910 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 PLA2G2AP14555 144 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 PCP4P48539 62 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 IFITM3Q01628 133 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 TAL2Q16559 108 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 CTSZQ9UBR2 303 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 NUP214P35658 2090 aaPredicted RBP3.36□□□□□ -1.87
VCAN-209ENST00000513016 IGHV3-16A0A0C4DH30 117 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 DNAJC9-AS1A6NH13 148 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 ANXA2RQ3ZCQ2 193 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 NEGR1Q7Z3B1 354 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 ZNF503Q96F45 646 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 C20orf144Q9BQM9 153 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 CHAC1Q9BUX1 264 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 SMIM2Q9BVW6 85 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 ZNRD1Q9P1U0 126 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 TANC1Q9C0D5 1861 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 A0A1B0GW64 132 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 D6R8Y8 96 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 SLURP1P55000 103 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 NIT1Q86X76 327 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 TMEM170AQ8WVE7 144 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 C5orf30Q96GV9 206 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 U3KQE9 123 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 WDR86Q86TI4 376 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 Q8NA96 180 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 GFI1Q99684 422 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 NOP10Q9NPE3 64 aaKnown RBP3.36□□□□□ -1.87
VCAN-209ENST00000513016 CACNA1EQ15878 2313 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 VWC2LB2RUY7 222 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 PRSS46E5RG02 174 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 PMVKQ15126 192 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 ANK1P16157 1881 aa3.36□□□□□ -1.87
VCAN-209ENST00000513016 CACNA1GO43497 2377 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 H3BMM0 161 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 IGHV4-31P0DP07 118 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 UBE2WQ96B02 151 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 A0A0J9YY99 117 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 ZFP36P26651 326 aaKnown RBP3.35□□□□□ -1.87
VCAN-209ENST00000513016 CFPP27918 469 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 RNF138Q8WVD3 245 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 NRGNQ92686 78 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 Q9HAA7 133 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 COX11Q9Y6N1 276 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 SPTBP11277 2137 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 RBAKDNA6NC62 111 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 PRSS29PA6NIE9 313 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 INAFM1C9JVW0 142 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.35□□□□□ -1.87
VCAN-209ENST00000513016 CT83Q5H943 113 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 GPHB5Q86YW7 130 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms