RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 SSBP1Q04837 148 aaKnown RBP1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 SURF2Q15527 256 aaPredicted RBP1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 MAJINQ3KP22 176 aa1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 C14orf177Q52M58 125 aa1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 SHISA6Q6ZSJ9 500 aa1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 COMMD6Q7Z4G1 85 aa1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 SH2D6Q7Z4S9 175 aa1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 C12orf76Q8N812 135 aaPredicted RBP1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR5A1Q8NGJ0 315 aa1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR4C3Q8NH37 302 aa1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 GATAD1Q8WUU5 269 aa1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 TSACCQ96A04 125 aaPredicted RBP1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 FAM103A1Q9BTL3 118 aaKnown RBP1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 AKIRIN1Q9H9L7 192 aaPredicted RBP1.34□□□□□ -2.19
TRAPPC13-211ENST00000512009 TRAV41A0A0B4J266 112 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1W2PRD5 423 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1W2PRF3 423 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 A0A1W2PRM7 423 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 A8MWP6 167 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 LEPROTL1O95214 131 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 NDUFC2O95298 119 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 HBDP02042 147 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 CCL3P10147 92 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 CD28P10747 220 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 PSG1P11464 419 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 HIST1H4AP62805 103 aaKnown RBP1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 HLA-DRB5Q30154 266 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 ACER2Q5QJU3 275 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 TPTE2P1Q5T6R2 138 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 C10orf113Q5VZT2 155 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 RHBDD2Q6NTF9 364 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 ACP7Q6ZNF0 438 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 PPP1R27Q86WC6 154 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 CIARTQ8N365 385 aaPredicted RBP1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM24BQ8N5W8 94 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZDHHC22Q8N966 263 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 MAPK1IP1LQ8NDC0 245 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 OR8B12Q8NGG6 310 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM167AQ8TBQ9 72 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 ALKBH3Q96Q83 286 aaPredicted RBP1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 OR8B4Q96RC9 309 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 TAF9BQ9HBM6 251 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 DPM3Q9P2X0 92 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV1-1A0A0B4J248 108 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 MBD3L4A6NDZ8 208 aaPredicted RBP1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 MBD3L3A6NE82 208 aaPredicted RBP1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 MBD3L5A6NJ08 208 aaPredicted RBP1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 B9A039 149 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 TMEM238C9JI98 176 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 LMO7DNF2Z398 122 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 H0YGG7 62 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 H0YIG0 161 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 J3KRW8 73 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 SOCS3O14543 225 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 SMAD7O15105 426 aaKnown RBP1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 PAGE4O60829 102 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 SSTR5P35346 364 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 RPL27P61353 136 aaKnown RBP1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 IL17RELQ6ZVW7 336 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 SLC25A45Q8N413 288 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF114Q8NC26 417 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 OR8A1Q8NGG7 326 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 PFN4Q8NHR9 129 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 MBD3L2Q8NHZ7 208 aaPredicted RBP1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 FAM168AQ92567 244 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 SPATA25Q9BR10 227 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 WNT10AQ9GZT5 417 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 ARRDC1-AS1Q9H2J1 176 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 TPSG1Q9NRR2 321 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 DEPPQ9NTK1 212 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 RCE1Q9Y256 329 aa1.34□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV8-2A0A0B4J237 113 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 H3BQ85 93 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 J3QR06 171 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 J3QT63 122 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 VCYO14598 125 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PDCD6O75340 191 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRGV3P03979 118 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 DSCR4P56555 118 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PRR20EP86478 221 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PRR20CP86479 221 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PRR20DP86480 221 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PRR20BP86481 221 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 PRR20AP86496 221 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ZNF585BQ52M93 769 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 RPS26P11Q5JNZ5 115 aaPredicted RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 MRPL55Q7Z7F7 128 aaKnown RBP1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 KRTAP19-1Q8IUB9 90 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 C11orf44Q8N8P7 122 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 DEFB124Q8NES8 71 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 NPIPB3Q92617 1050 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ASCL2Q99929 193 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 TTTY10Q9BZA0 68 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 CMC2Q9NRP2 79 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 OR51B2Q9Y5P1 312 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 USH2AO75445 5202 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 TRAV34A0A0B4J273 112 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 ETDCA0A1B0GVM5 59 aa1.33□□□□□ -2.2
TRAPPC13-211ENST00000512009 TCRBV4S1A1TA0A5B7 111 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms