RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SLC25A1P53007 311 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 FOXA3P55318 350 aaPredicted RBP3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 MRPL54Q6P161 138 aaKnown RBP3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 Q6ZSV7 163 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 LINC01560Q8TB33 94 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 GPX7Q96SL4 187 aaPredicted RBP3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 GNB4Q9HAV0 340 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 NPVFQ9HCQ7 196 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 MDFICQ9P1T7 246 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 CELSR1Q9NYQ6 3014 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 CCDC168Q8NDH2 2452 aa3.9□□□□□ -1.78
TRAPPC11-208ENST00000511955 TRAV8-3A0A0A6YYJ7 113 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 IGHG2P01859 326 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 FOXL2NBQ6ZUU3 175 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 PGLYRP4Q96LB8 373 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 C18orf15Q96N68 181 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 PYGO2Q9BRQ0 406 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 COMMD5Q9GZQ3 224 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 CACNG5Q9UF02 275 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 ROS1P08922 2347 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 FREM1Q5H8C1 2179 aa3.9□□□□□ -1.79
TRAPPC11-208ENST00000511955 OR2T8A6NH00 312 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 H0Y9J4 135 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 BGLAPP02818 100 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 INSL3P51460 131 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 RPL18Q07020 188 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 DIAPH2-AS1Q14236 149 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 Q6AWC8 147 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 UFSP1Q6NVU6 142 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 Q6Q795 121 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 Q6ZRM9 215 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 AAED1Q7RTV5 226 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 C1orf174Q8IYL3 243 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 C3orf22Q8N5N4 141 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 OR9G1Q8NH87 305 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 RTN4IP1Q8WWV3 396 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 AQP10Q96PS8 301 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 SPIN2AQ99865 258 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 SPIN2BQ9BPZ2 258 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 MRPL32Q9BYC8 188 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 TMEM191AQ9H0A3 160 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 ZNF581Q9P0T4 197 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 NOP16Q9Y3C1 178 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 SELENOKQ9Y6D0 94 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 TRBV19A0A075B6N1 114 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 SMIM26A0A096LP01 95 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 TEX48A0A1B0GUV7 120 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 RER1O15258 196 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 PPP1R3DO95685 299 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 SRP14P37108 136 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 BRWD1-AS2P59051 145 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 CYCSP99999 105 aaKnown RBP3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 WDR86Q86TI4 376 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 C10orf126Q8N4M7 172 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 ZIC4Q8N9L1 334 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 ZNRF1Q8ND25 227 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 DPH3Q96FX2 82 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 KCNS1Q96KK3 526 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 RPRMQ9NS64 109 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 ARHGAP21Q5T5U3 1957 aa3.89□□□□□ -1.79
TRAPPC11-208ENST00000511955 ABCA4P78363 2273 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 PRR14LQ5THK1 2151 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 HRASP01112 189 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 KRASP01116 189 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 CGAP01215 116 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 MT-ND6P03923 174 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 ASAH2BP0C7U1 165 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 INAFM2P0DMQ5 153 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 OPRK1P41145 380 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 MFAP2P55001 183 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 TFF3Q07654 80 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 KLRD1Q13241 179 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 MSMO1Q15800 293 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 DPPA3Q6W0C5 159 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 Q6ZUT4 128 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 C11orf72Q8NBR9 251 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 OR2T10Q8NGZ9 312 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 OR4A5Q8NH83 315 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 CMTM2Q8TAZ6 248 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 FAM3DQ96BQ1 224 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 NMES1Q9C002 83 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 BANF2Q9H503 90 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 NCOA6Q14686 2063 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 IGLV9-49A0A0B4J1Y8 123 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 TRAV1-2A0A0B4J238 106 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 MUC21A0A0G2JKD1 596 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 A0A0G2JRQ6 117 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 E9PLD3 99 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 C16orf97H3BN30 126 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 ANGPTL7O43827 346 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 CD5LO43866 347 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 SRP19P09132 144 aaKnown RBP3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 PATE4P0C8F1 98 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 COX6B1P14854 86 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 IGHV1-2P23083 117 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 PSMB2P49721 201 aa3.88□□□□□ -1.79
TRAPPC11-208ENST00000511955 SMIM11AP58511 58 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms