RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 OR10G4Q8NGN3 311 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 OR10G9Q8NGN4 311 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 OR10G7Q8NGN6 311 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 RNF183Q96D59 192 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 C17orf77Q96MU5 243 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 SAV1Q9H4B6 383 aaPredicted RBP5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 HLA-DRB4X5D2U9 266 aa5.25□□□□□ -1.57
PDLIM5-215ENST00000511586 HUWE1Q7Z6Z7 4374 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 TRAV5A0A0B4J249 113 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 A0A1W2PPV4 95 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 TMEM218A2RU14 115 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 RBFOX3A6NFN3 312 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 F8W036 122 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 FGF8P55075 233 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 ZNF726P1Q15940 193 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 GCSAMLQ5JQS6 135 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 FAM78BQ5VT40 261 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 C20orf173Q96LM9 149 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 CLUHP3Q96NS8 147 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 EDA2RQ9HAV5 297 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 ZNF331Q9NQX6 463 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 GNG13Q9P2W3 67 aa5.24□□□□□ -1.57
PDLIM5-215ENST00000511586 COL7A1Q02388 2944 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 TRAV8-2A0A0B4J237 113 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 A0A0J9YX75 114 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 F6UB75 175 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 HMGB3O15347 200 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 DUSP14O95147 198 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 IGKV3-20P01619 116 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 SNRPCP09234 159 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 GIG44P09565 113 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 IGLC2P0DOY2 106 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 BCL2P10415 239 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 TAGLN2P37802 199 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 CEBPGP53567 150 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 DEFB1P60022 68 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 RHOBP62745 196 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 SRSF3P84103 164 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 PSG3Q16557 428 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 ZNF506Q5JVG8 444 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 GDF5OSQ5U4N7 250 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 IGFL4Q6B9Z1 124 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 SSX7Q7RTT5 188 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 SVBPQ8N300 66 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 RPP25LQ8N5L8 163 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 RNF182Q8N6D2 247 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 ZNF738Q8NE65 137 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 OR4B1Q8NGF8 309 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 MUC7Q8TAX7 377 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 MBD3L1Q8WWY6 194 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 RARRES2Q99969 163 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 SLC50A1Q9BRV3 221 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 C1QTNF4Q9BXJ3 329 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 SEC11CQ9BY50 192 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 MRPL32Q9BYC8 188 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 SMDT1Q9H4I9 107 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 MANBALQ9NQG1 85 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 CLEC5AQ9NY25 188 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 TMEM14CQ9P0S9 112 aa5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 CARHSP1Q9Y2V2 147 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-215ENST00000511586 TRBV19A0A075B6N1 114 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 LOC102723971A0A1B0GUV8 181 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 C3orf84H3BNL1 204 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 H3BQ15 152 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 H3BTX0 84 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 ZNF253O75346 499 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 SNAPINO95295 136 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 HIST1H1EP10412 219 aaKnown RBP5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 HLA-DMBP28068 263 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 TAS2R45P59539 299 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 CCL20P78556 96 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 PSG9Q00887 426 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 ICAM4Q14773 271 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 KHDC3LQ587J8 217 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 MIR17HGQ75NE6 70 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 OR11H2Q8NH07 326 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 RXFP4Q8TDU9 374 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 RAB24Q969Q5 203 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 FAM167A-AS1Q96KT0 104 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 SLC25A2Q9BXI2 301 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 KRTAP3-3Q9BYR6 98 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 KRTAP3-2Q9BYR7 98 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 SLC35B3Q9H1N7 401 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 OR51M1Q9H341 326 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 ZNF586Q9NXT0 402 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 XCL2Q9UBD3 114 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 FUT9Q9Y231 359 aa5.22□□□□□ -1.57
PDLIM5-215ENST00000511586 A0A0J9YWU9 116 aa5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 A8MTW9 85 aa5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 SLC17A3O00476 420 aa5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 EIF3GO75821 320 aaKnown RBP eCLIP5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 CXorf1O96002 111 aa5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 NBEAP1P0C6P0 100 aa5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 ARL14EPLP0DKL9 152 aa5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 PYYP10082 97 aa5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 ADCYAP1P18509 176 aa5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 CNN1P51911 297 aaKnown RBP5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 PDE6HQ13956 83 aa5.21□□□□□ -1.58
PDLIM5-215ENST00000511586 SOHLH1Q5JUK2 328 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms