RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 PARD6GQ9BYG4 376 aaPredicted RBP13.24□□□□□ -0.29
LSM6-206ENST00000510331 ZNF586Q9NXT0 402 aa13.24□□□□□ -0.29
LSM6-206ENST00000510331 PPP1R14DQ9NXH3 145 aa13.23□□□□□ -0.29
LSM6-206ENST00000510331 PLA2G2EQ9NZK7 142 aa13.23□□□□□ -0.29
LSM6-206ENST00000510331 TEX48A0A1B0GUV7 120 aa13.22□□□□□ -0.29
LSM6-206ENST00000510331 PYYP10082 97 aa13.22□□□□□ -0.29
LSM6-206ENST00000510331 NIPSNAP3BQ9BS92 247 aa13.22□□□□□ -0.29
LSM6-206ENST00000510331 DNAH10Q8IVF4 4471 aa13.21□□□□□ -0.29
LSM6-206ENST00000510331 MPC2O95563 127 aa13.21□□□□□ -0.29
LSM6-206ENST00000510331 KIR3DS1Q14943 382 aa13.21□□□□□ -0.29
LSM6-206ENST00000510331 GUK1Q16774 197 aa13.21□□□□□ -0.29
LSM6-206ENST00000510331 SLC25A2Q9BXI2 301 aa13.21□□□□□ -0.29
LSM6-206ENST00000510331 WDR61Q9GZS3 305 aaKnown RBP13.21□□□□□ -0.29
LSM6-206ENST00000510331 TMEM14CQ9P0S9 112 aa13.21□□□□□ -0.29
LSM6-206ENST00000510331 MBD2Q9UBB5 411 aa13.21□□□□□ -0.29
LSM6-206ENST00000510331 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
LSM6-206ENST00000510331 PET100P0DJ07 73 aa13.2□□□□□ -0.3
LSM6-206ENST00000510331 CDKN1BP46527 198 aa13.2□□□□□ -0.3
LSM6-206ENST00000510331 MIR17HGQ75NE6 70 aa13.2□□□□□ -0.3
LSM6-206ENST00000510331 OR10J6PQ8NGY7 276 aa13.2□□□□□ -0.3
LSM6-206ENST00000510331 ATP5SQ99766 215 aa13.2□□□□□ -0.3
LSM6-206ENST00000510331 HSPB11Q9Y547 144 aa13.2□□□□□ -0.3
LSM6-206ENST00000510331 ALG5Q9Y673 324 aa13.2□□□□□ -0.3
LSM6-206ENST00000510331 PLAC8L1A1L4L8 177 aa13.19□□□□□ -0.3
LSM6-206ENST00000510331 M0R3E3 92 aa13.19□□□□□ -0.3
LSM6-206ENST00000510331 ZNF253O75346 499 aa13.19□□□□□ -0.3
LSM6-206ENST00000510331 NDUFB4O95168 129 aa13.19□□□□□ -0.3
LSM6-206ENST00000510331 HTN3P15516 51 aa13.19□□□□□ -0.3
LSM6-206ENST00000510331 AZU1P20160 251 aa13.19□□□□□ -0.3
LSM6-206ENST00000510331 SMIM3Q9BZL3 60 aa13.19□□□□□ -0.3
LSM6-206ENST00000510331 KCNIP2Q9NS61 270 aa13.19□□□□□ -0.3
LSM6-206ENST00000510331 NPIPB6E9PJ23 425 aa13.18□□□□□ -0.3
LSM6-206ENST00000510331 GFI1BQ5VTD9 330 aa13.18□□□□□ -0.3
LSM6-206ENST00000510331 TMEM256Q8N2U0 113 aa13.18□□□□□ -0.3
LSM6-206ENST00000510331 BLNKQ8WV28 456 aa13.18□□□□□ -0.3
LSM6-206ENST00000510331 FAM167A-AS1Q96KT0 104 aa13.18□□□□□ -0.3
LSM6-206ENST00000510331 LINC01587Q99440 93 aa13.18□□□□□ -0.3
LSM6-206ENST00000510331 NDUFAF3Q9BU61 184 aa13.18□□□□□ -0.3
LSM6-206ENST00000510331 J3KRW8 73 aa13.17□□□□□ -0.3
LSM6-206ENST00000510331 PTTG1O95997 202 aa13.17□□□□□ -0.3
LSM6-206ENST00000510331 HIST1H1EP10412 219 aaKnown RBP13.17□□□□□ -0.3
LSM6-206ENST00000510331 TSPOP30536 169 aa13.17□□□□□ -0.3
LSM6-206ENST00000510331 DAD1P61803 113 aa13.17□□□□□ -0.3
LSM6-206ENST00000510331 OXA1LQ15070 435 aa13.17□□□□□ -0.3
LSM6-206ENST00000510331 CT45A10P0DMU9 189 aa13.16□□□□□ -0.3
LSM6-206ENST00000510331 HTN1P15515 57 aa13.16□□□□□ -0.3
LSM6-206ENST00000510331 RPL12P30050 165 aaKnown RBP13.16□□□□□ -0.3
LSM6-206ENST00000510331 TAS2R60P59551 318 aa13.16□□□□□ -0.3
LSM6-206ENST00000510331 PDE6HQ13956 83 aa13.16□□□□□ -0.3
LSM6-206ENST00000510331 EXOC3-AS1Q8N2X6 119 aa13.16□□□□□ -0.3
LSM6-206ENST00000510331 MRPL53Q96EL3 112 aaKnown RBP13.16□□□□□ -0.3
LSM6-206ENST00000510331 TIMM9Q9Y5J7 89 aa13.16□□□□□ -0.3
LSM6-206ENST00000510331 C17orf112F2Z3M2 114 aa13.15□□□□□ -0.3
LSM6-206ENST00000510331 MRPL32Q9BYC8 188 aaKnown RBP13.15□□□□□ -0.3
LSM6-206ENST00000510331 FUT9Q9Y231 359 aa13.15□□□□□ -0.3
LSM6-206ENST00000510331 LYRM9A8MSI8 78 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 OR10J4P0C629 311 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 DEFB130BP0DP73 79 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 DEFB130AP0DP74 79 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 ERCC8Q13216 396 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 FCN2Q15485 313 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 RNASE8Q8TDE3 154 aaKnown RBP13.14□□□□□ -0.31
LSM6-206ENST00000510331 FXYD5Q96DB9 178 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 PHYHIPLQ96FC7 376 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 C16orf74Q96GX8 76 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 ODF3Q96PU9 254 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 WFDC1Q9HC57 220 aa13.14□□□□□ -0.31
LSM6-206ENST00000510331 H7BYZ3 331 aa13.13□□□□□ -0.31
LSM6-206ENST00000510331 LEPP41159 167 aa13.13□□□□□ -0.31
LSM6-206ENST00000510331 FFAR4Q5NUL3 377 aa13.13□□□□□ -0.31
LSM6-206ENST00000510331 TMEM88Q6PEY1 159 aa13.13□□□□□ -0.31
LSM6-206ENST00000510331 PAXXQ9BUH6 204 aa13.13□□□□□ -0.31
LSM6-206ENST00000510331 IGKV2-40A0A087WW87 121 aaPredicted RBP13.12□□□□□ -0.31
LSM6-206ENST00000510331 IFNA5P01569 189 aa13.12□□□□□ -0.31
LSM6-206ENST00000510331 IGKV2D-40P01614 121 aaPredicted RBP13.12□□□□□ -0.31
LSM6-206ENST00000510331 ICAM4Q14773 271 aa13.12□□□□□ -0.31
LSM6-206ENST00000510331 FAM122CQ6P4D5 195 aa13.12□□□□□ -0.31
LSM6-206ENST00000510331 TMEM263Q8WUH6 116 aaKnown RBP13.12□□□□□ -0.31
LSM6-206ENST00000510331 ZNF503Q96F45 646 aa13.12□□□□□ -0.31
LSM6-206ENST00000510331 C20orf144Q9BQM9 153 aa13.12□□□□□ -0.31
LSM6-206ENST00000510331 OR51M1Q9H341 326 aa13.12□□□□□ -0.31
LSM6-206ENST00000510331 AAMDCQ9H7C9 122 aa13.12□□□□□ -0.31
LSM6-206ENST00000510331 TRAV12-3A0A0B4J271 114 aa13.11□□□□□ -0.31
LSM6-206ENST00000510331 OR7C2O60412 319 aa13.11□□□□□ -0.31
LSM6-206ENST00000510331 EIF3GO75821 320 aaKnown RBP eCLIP13.11□□□□□ -0.31
LSM6-206ENST00000510331 UBE2L3P68036 154 aaKnown RBP13.11□□□□□ -0.31
LSM6-206ENST00000510331 FAM210BQ96KR6 192 aa13.11□□□□□ -0.31
LSM6-206ENST00000510331 PRELID1Q9Y255 219 aa13.11□□□□□ -0.31
LSM6-206ENST00000510331 HECTD4Q9Y4D8 3996 aa13.11□□□□□ -0.31
LSM6-206ENST00000510331 NBEAP1P0C6P0 100 aa13.1□□□□□ -0.31
LSM6-206ENST00000510331 P0DMU3 169 aa13.1□□□□□ -0.31
LSM6-206ENST00000510331 FAM231AP0DMU4 169 aa13.1□□□□□ -0.31
LSM6-206ENST00000510331 FAM231CP0DMU5 169 aa13.1□□□□□ -0.31
LSM6-206ENST00000510331 SCGB1C1Q8TD33 95 aa13.1□□□□□ -0.31
LSM6-206ENST00000510331 RNF141Q8WVD5 230 aa13.1□□□□□ -0.31
LSM6-206ENST00000510331 MED28Q9H204 178 aa13.1□□□□□ -0.31
LSM6-206ENST00000510331 NOP10Q9NPE3 64 aaKnown RBP13.1□□□□□ -0.31
LSM6-206ENST00000510331 BTN1A1Q13410 526 aa13.09□□□□□ -0.31
LSM6-206ENST00000510331 ZNF493Q6ZR52 646 aa13.09□□□□□ -0.31
LSM6-206ENST00000510331 POM121L12Q8N7R1 296 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms