RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 TSTD3H0UI37 97 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 AZU1P20160 251 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 SLAQ13239 276 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 PRELID3AQ96N28 172 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 FAM208BQ5VWN6 2430 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 ACACBO00763 2458 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 TRAV9-1A0A075B6T8 112 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 TRAV1-1A0A0B4J248 108 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 LGALS9O00182 355 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 UBE2CO00762 179 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 PCP4L1A6NKN8 68 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 RHODO00212 210 aa3.99□□□□□ -1.77
PHF3-210ENST00000509876 RPP25LQ8N5L8 163 aaKnown RBP3.99□□□□□ -1.77
PHF3-210ENST00000509876 DLX4Q92988 240 aaPredicted RBP3.99□□□□□ -1.77
PHF3-210ENST00000509876 ZNF48Q96MX3 618 aaPredicted RBP3.99□□□□□ -1.77
PHF3-210ENST00000509876 CTSGP08311 255 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 SRP19P09132 144 aaKnown RBP3.98□□□□□ -1.77
PHF3-210ENST00000509876 SRIP30626 198 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 CFAP161Q6P656 301 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 C16orf54Q6UWD8 224 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 Q86TA4 180 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 SPXQ9BT56 116 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 MUC21A0A0G2JKD1 596 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 MUC21A0A140T8X8 626 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 IGLL1P15814 213 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 C16orf95Q9H693 158 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 OSTCQ9NRP0 149 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 KLK9Q9UKQ9 250 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 ELOBQ15370 118 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 HAPLN4Q86UW8 402 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 APRG1Q8IVJ8 170 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 SMIM12Q96EX1 92 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 C16orf74Q96GX8 76 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 MRPL18Q9H0U6 180 aaKnown RBP3.98□□□□□ -1.77
PHF3-210ENST00000509876 IGF2RP11717 2491 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 IGHV3-73A0A0B4J1V6 119 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 PAX9P55771 341 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 SRSF2Q01130 221 aaKnown RBP3.98□□□□□ -1.77
PHF3-210ENST00000509876 C5orf30Q96GV9 206 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 TMEM191AQ9H0A3 160 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 PKDREJQ9NTG1 2253 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 DSCAMO60469 2012 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 H3BRM9 83 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 PFN1P07737 140 aaKnown RBP3.98□□□□□ -1.77
PHF3-210ENST00000509876 ZNF705AQ6ZN79 300 aaPredicted RBP3.98□□□□□ -1.77
PHF3-210ENST00000509876 RMI2Q96E14 147 aa3.98□□□□□ -1.77
PHF3-210ENST00000509876 RBAKDNA6NC62 111 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 SPART-AS1P0CW21 52 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 SSBP2P81877 361 aaPredicted RBP3.97□□□□□ -1.77
PHF3-210ENST00000509876 COPS9Q8WXC6 57 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 MIEN1Q9BRT3 115 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 FNDC4Q9H6D8 234 aaPredicted RBP3.97□□□□□ -1.77
PHF3-210ENST00000509876 ADARB2-AS1A8MUL3 147 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 HIGD1CA8MV81 97 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 ORMDL3Q8N138 153 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 SPATA25Q9BR10 227 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 NBASA2RRP1 2371 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 GAGE12BA1L429 117 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 A8MWV9 139 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 ZNF324O75467 553 aaPredicted RBP3.97□□□□□ -1.77
PHF3-210ENST00000509876 GAGE7O76087 117 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 GAGE12FP0CL80 117 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 GAGE12GP0CL81 117 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 GAGE12IP0CL82 117 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 SUMO2P61956 95 aaKnown RBP3.97□□□□□ -1.77
PHF3-210ENST00000509876 Q1RN00 199 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 DPH3P1Q9H4G8 78 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 CYTL1Q9NRR1 136 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 AP5S1Q9NUS5 200 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 EXPH5Q8NEV8 1989 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 RTTNQ86VV8 2226 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 IGLV2-14P01704 120 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 PPBPP02775 128 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 CFHR3Q02985 330 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 TSKUQ8WUA8 353 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 PRR25Q96S07 402 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 TRAV12-2A0A075B6T6 113 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 WI2-2373I1.2A0A1W2PRP0 233 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 AVPP01185 164 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 TMEM136Q6ZRR5 245 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 ZNF414Q96IQ9 312 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 RNASE7Q9H1E1 156 aaKnown RBP3.97□□□□□ -1.77
PHF3-210ENST00000509876 SLC17A3O00476 420 aa3.97□□□□□ -1.77
PHF3-210ENST00000509876 PRB4P10163 310 aaPredicted RBP3.97□□□□□ -1.77
PHF3-210ENST00000509876 IFI27P40305 119 aaPredicted RBP3.97□□□□□ -1.77
PHF3-210ENST00000509876 SPRY2O43597 315 aa3.96□□□□□ -1.77
PHF3-210ENST00000509876 BATFQ16520 125 aa3.96□□□□□ -1.77
PHF3-210ENST00000509876 OR10AG1Q8NH19 301 aa3.96□□□□□ -1.77
PHF3-210ENST00000509876 ISOC2Q96AB3 205 aa3.96□□□□□ -1.77
PHF3-210ENST00000509876 PYGO2Q9BRQ0 406 aa3.96□□□□□ -1.77
PHF3-210ENST00000509876 LY96Q9Y6Y9 160 aa3.96□□□□□ -1.77
PHF3-210ENST00000509876 M0R3E3 92 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 Q8N6K4 173 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 NUDT10Q8NFP7 164 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 NUDT11Q96G61 164 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 C1orf159Q96HA4 380 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 PCNX1Q96RV3 2341 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 LINC01549A6NIU2 74 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 ZNF876PQ49A33 203 aa3.96□□□□□ -1.78
PHF3-210ENST00000509876 SCGB1D4Q6XE38 83 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms