RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 OR5I1Q13606 314 aa10.8□□□□□ -0.68
TPM3-219ENST00000509409 MORN5Q5VZ52 161 aa10.8□□□□□ -0.68
TPM3-219ENST00000509409 MIC13Q5XKP0 118 aa10.8□□□□□ -0.68
TPM3-219ENST00000509409 ZNF431Q8TF32 576 aaPredicted RBP10.8□□□□□ -0.68
TPM3-219ENST00000509409 TMEM263Q8WUH6 116 aaKnown RBP10.8□□□□□ -0.68
TPM3-219ENST00000509409 SEC22CQ9BRL7 303 aa10.8□□□□□ -0.68
TPM3-219ENST00000509409 UQCC1Q9NVA1 299 aa10.8□□□□□ -0.68
TPM3-219ENST00000509409 SLC17A3O00476 420 aa10.79□□□□□ -0.68
TPM3-219ENST00000509409 S100A10P60903 97 aa10.79□□□□□ -0.68
TPM3-219ENST00000509409 KIR3DS1Q14943 382 aa10.79□□□□□ -0.68
TPM3-219ENST00000509409 C12orf45Q8N5I9 185 aaPredicted RBP10.79□□□□□ -0.68
TPM3-219ENST00000509409 C2orf50Q96LR7 162 aa10.79□□□□□ -0.68
TPM3-219ENST00000509409 C20orf144Q9BQM9 153 aa10.79□□□□□ -0.68
TPM3-219ENST00000509409 DNAH11Q96DT5 4516 aa10.79□□□□□ -0.68
TPM3-219ENST00000509409 PKD1P98161 4303 aa10.78□□□□□ -0.68
TPM3-219ENST00000509409 H3BQ15 152 aa10.78□□□□□ -0.68
TPM3-219ENST00000509409 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
TPM3-219ENST00000509409 S100A11P31949 105 aa10.78□□□□□ -0.68
TPM3-219ENST00000509409 BAXQ07812 192 aa10.78□□□□□ -0.68
TPM3-219ENST00000509409 GUK1Q16774 197 aa10.78□□□□□ -0.68
TPM3-219ENST00000509409 GFI1BQ5VTD9 330 aa10.78□□□□□ -0.68
TPM3-219ENST00000509409 RNASE8Q8TDE3 154 aaKnown RBP10.78□□□□□ -0.68
TPM3-219ENST00000509409 RNF141Q8WVD5 230 aa10.78□□□□□ -0.68
TPM3-219ENST00000509409 SAT2Q96F10 170 aaPredicted RBP10.78□□□□□ -0.68
TPM3-219ENST00000509409 PFDN5Q99471 154 aa10.78□□□□□ -0.68
TPM3-219ENST00000509409 NUDT15Q9NV35 164 aa10.78□□□□□ -0.68
TPM3-219ENST00000509409 NBDYA0A0U1RRE5 68 aa10.77□□□□□ -0.69
TPM3-219ENST00000509409 SNURFLB1AK76 121 aa10.77□□□□□ -0.69
TPM3-219ENST00000509409 RLN2P04090 185 aa10.77□□□□□ -0.69
TPM3-219ENST00000509409 H2AFB2P0C5Z0 115 aa10.77□□□□□ -0.69
TPM3-219ENST00000509409 LEPP41159 167 aa10.77□□□□□ -0.69
TPM3-219ENST00000509409 ZNRF2Q8NHG8 242 aa10.77□□□□□ -0.69
TPM3-219ENST00000509409 WDR83OSQ9Y284 106 aa10.77□□□□□ -0.69
TPM3-219ENST00000509409 LINC00588Q9Y4M8 146 aa10.77□□□□□ -0.69
TPM3-219ENST00000509409 TRAV12-3A0A0B4J271 114 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 UBE2L5PA0A1B0GUS4 154 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 GAGE12BA1L429 117 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 GAGE7O76087 117 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 GAGE12FP0CL80 117 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 GAGE12GP0CL81 117 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 GAGE12IP0CL82 117 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 CT45A10P0DMU9 189 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 RPL29P47914 159 aaKnown RBP10.76□□□□□ -0.69
TPM3-219ENST00000509409 SULT1A1P50225 295 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 ZNF575Q86XF7 245 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 STX12Q86Y82 276 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 GNPNAT1Q96EK6 184 aaPredicted RBP10.76□□□□□ -0.69
TPM3-219ENST00000509409 SLC39A9Q9NUM3 307 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 NDUFA13Q9P0J0 144 aa10.76□□□□□ -0.69
TPM3-219ENST00000509409 TRAV26-1A0A087WT03 109 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 A0A0J9YY99 117 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 FAM240BA0A1B0GVZ2 78 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 FGF7P21781 194 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 HBG1P69891 147 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 HBG2P69892 147 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 RAB32Q13637 225 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 SSX7Q7RTT5 188 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 C6orf223Q8N319 242 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 TMEM252Q8N6L7 170 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 C11orf1Q9H5F2 150 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 LYRM2Q9NU23 88 aaPredicted RBP10.75□□□□□ -0.69
TPM3-219ENST00000509409 ZNF586Q9NXT0 402 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 TIMM9Q9Y5J7 89 aa10.75□□□□□ -0.69
TPM3-219ENST00000509409 IGSF23A1L1A6 192 aa10.74□□□□□ -0.69
TPM3-219ENST00000509409 M6PRP20645 277 aa10.74□□□□□ -0.69
TPM3-219ENST00000509409 TNP2Q05952 138 aa10.74□□□□□ -0.69
TPM3-219ENST00000509409 ERCC8Q13216 396 aa10.74□□□□□ -0.69
TPM3-219ENST00000509409 ATP6V1FQ16864 119 aa10.74□□□□□ -0.69
TPM3-219ENST00000509409 GPN1Q9HCN4 374 aaPredicted RBP10.74□□□□□ -0.69
TPM3-219ENST00000509409 PCLOQ9Y6V0 5065 aa10.74□□□□□ -0.69
TPM3-219ENST00000509409 TRBV19A0A075B6N1 114 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 NPIPB6E9PJ23 425 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 VWC2Q2TAL6 325 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 MZT2BQ6NZ67 158 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 RXFP4Q8TDU9 374 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 BLNKQ8WV28 456 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 ODF3Q96PU9 254 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 CCDC32Q9BV29 185 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 Q9H8V8 135 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 NACAE9PAV3 2078 aa10.73□□□□□ -0.69
TPM3-219ENST00000509409 M0R3E3 92 aa10.72□□□□□ -0.69
TPM3-219ENST00000509409 ZNF253O75346 499 aa10.72□□□□□ -0.69
TPM3-219ENST00000509409 HIST1H1EP10412 219 aaKnown RBP10.72□□□□□ -0.69
TPM3-219ENST00000509409 MRPL53Q96EL3 112 aaKnown RBP10.72□□□□□ -0.69
TPM3-219ENST00000509409 LINC00477Q96M19 166 aa10.72□□□□□ -0.69
TPM3-219ENST00000509409 PRELID1Q9Y255 219 aa10.72□□□□□ -0.69
TPM3-219ENST00000509409 C16orf90A8MZG2 172 aa10.71□□□□□ -0.69
TPM3-219ENST00000509409 SLC25A5P05141 298 aaKnown RBP10.71□□□□□ -0.69
TPM3-219ENST00000509409 PYYP10082 97 aa10.71□□□□□ -0.69
TPM3-219ENST00000509409 LINC00612Q8N6U2 182 aa10.71□□□□□ -0.69
TPM3-219ENST00000509409 CHAC2Q8WUX2 184 aa10.71□□□□□ -0.69
TPM3-219ENST00000509409 TMEM14CQ9P0S9 112 aa10.71□□□□□ -0.69
TPM3-219ENST00000509409 TRGV2A0A075B6R0 118 aa10.7□□□□□ -0.7
TPM3-219ENST00000509409 C7orf71A4D174 169 aa10.7□□□□□ -0.7
TPM3-219ENST00000509409 MPDU1O75352 247 aa10.7□□□□□ -0.7
TPM3-219ENST00000509409 HOXA5P20719 270 aa10.7□□□□□ -0.7
TPM3-219ENST00000509409 RNASE4P34096 147 aaKnown RBP10.7□□□□□ -0.7
TPM3-219ENST00000509409 DAZ2Q13117 558 aaKnown RBP10.7□□□□□ -0.7
TPM3-219ENST00000509409 IL15RAQ13261 267 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms