RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 OR5AC2Q9NZP5 309 aa13.34□□□□□ -0.27
UBE3D-207ENST00000509102 TRAV5A0A0B4J249 113 aa13.33□□□□□ -0.28
UBE3D-207ENST00000509102 C17orf112F2Z3M2 114 aa13.33□□□□□ -0.28
UBE3D-207ENST00000509102 SLC17A3O00476 420 aa13.33□□□□□ -0.28
UBE3D-207ENST00000509102 ZNF253O75346 499 aa13.33□□□□□ -0.28
UBE3D-207ENST00000509102 CLINT1Q14677 625 aa13.33□□□□□ -0.28
UBE3D-207ENST00000509102 RPP25LQ8N5L8 163 aaKnown RBP13.33□□□□□ -0.28
UBE3D-207ENST00000509102 FAM210BQ96KR6 192 aa13.33□□□□□ -0.28
UBE3D-207ENST00000509102 ZNF705GA8MUZ8 300 aaPredicted RBP13.32□□□□□ -0.28
UBE3D-207ENST00000509102 H3BQ15 152 aa13.32□□□□□ -0.28
UBE3D-207ENST00000509102 H2BFSP57053 126 aa13.32□□□□□ -0.28
UBE3D-207ENST00000509102 TMEM14CQ9P0S9 112 aa13.32□□□□□ -0.28
UBE3D-207ENST00000509102 TIMM9Q9Y5J7 89 aa13.32□□□□□ -0.28
UBE3D-207ENST00000509102 LYRM9A8MSI8 78 aa13.31□□□□□ -0.28
UBE3D-207ENST00000509102 P0DMU3 169 aa13.31□□□□□ -0.28
UBE3D-207ENST00000509102 FAM231AP0DMU4 169 aa13.31□□□□□ -0.28
UBE3D-207ENST00000509102 FAM231CP0DMU5 169 aa13.31□□□□□ -0.28
UBE3D-207ENST00000509102 HTN1P15515 57 aa13.31□□□□□ -0.28
UBE3D-207ENST00000509102 HTN3P15516 51 aa13.31□□□□□ -0.28
UBE3D-207ENST00000509102 TAS2R60P59551 318 aa13.31□□□□□ -0.28
UBE3D-207ENST00000509102 SAT2Q96F10 170 aaPredicted RBP13.31□□□□□ -0.28
UBE3D-207ENST00000509102 C20orf144Q9BQM9 153 aa13.31□□□□□ -0.28
UBE3D-207ENST00000509102 HIST1H1EP10412 219 aaKnown RBP13.3□□□□□ -0.28
UBE3D-207ENST00000509102 PDE6HQ13956 83 aa13.3□□□□□ -0.28
UBE3D-207ENST00000509102 MRPL53Q96EL3 112 aaKnown RBP13.3□□□□□ -0.28
UBE3D-207ENST00000509102 C16orf74Q96GX8 76 aa13.3□□□□□ -0.28
UBE3D-207ENST00000509102 WDR61Q9GZS3 305 aaKnown RBP13.3□□□□□ -0.28
UBE3D-207ENST00000509102 AAMDCQ9H7C9 122 aa13.3□□□□□ -0.28
UBE3D-207ENST00000509102 ZNF586Q9NXT0 402 aa13.3□□□□□ -0.28
UBE3D-207ENST00000509102 PRELID1Q9Y255 219 aa13.3□□□□□ -0.28
UBE3D-207ENST00000509102 TRBV19A0A075B6N1 114 aa13.29□□□□□ -0.28
UBE3D-207ENST00000509102 H0YIZ8 118 aa13.29□□□□□ -0.28
UBE3D-207ENST00000509102 H7BYZ3 331 aa13.29□□□□□ -0.28
UBE3D-207ENST00000509102 MPC2O95563 127 aa13.29□□□□□ -0.28
UBE3D-207ENST00000509102 LEPP41159 167 aa13.29□□□□□ -0.28
UBE3D-207ENST00000509102 ATP5SQ99766 215 aa13.29□□□□□ -0.28
UBE3D-207ENST00000509102 MRPL32Q9BYC8 188 aaKnown RBP13.29□□□□□ -0.28
UBE3D-207ENST00000509102 IFNA5P01569 189 aa13.28□□□□□ -0.28
UBE3D-207ENST00000509102 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
UBE3D-207ENST00000509102 ZNF493Q6ZR52 646 aa13.28□□□□□ -0.28
UBE3D-207ENST00000509102 CCDC28AQ8IWP9 274 aa13.28□□□□□ -0.28
UBE3D-207ENST00000509102 SCGB1C1Q8TD33 95 aa13.28□□□□□ -0.28
UBE3D-207ENST00000509102 BLNKQ8WV28 456 aa13.28□□□□□ -0.28
UBE3D-207ENST00000509102 ODF3Q96PU9 254 aa13.28□□□□□ -0.28
UBE3D-207ENST00000509102 EPPK1P58107 5090 aaKnown RBP13.27□□□□□ -0.29
UBE3D-207ENST00000509102 PRAC2D3DTV9 90 aa13.27□□□□□ -0.29
UBE3D-207ENST00000509102 GCSAMLQ5JQS6 135 aa13.27□□□□□ -0.29
UBE3D-207ENST00000509102 HSPB11Q9Y547 144 aa13.27□□□□□ -0.29
UBE3D-207ENST00000509102 NPIPB6E9PJ23 425 aa13.26□□□□□ -0.29
UBE3D-207ENST00000509102 DEFB130BP0DP73 79 aa13.26□□□□□ -0.29
UBE3D-207ENST00000509102 DEFB130AP0DP74 79 aa13.26□□□□□ -0.29
UBE3D-207ENST00000509102 PYYP10082 97 aa13.26□□□□□ -0.29
UBE3D-207ENST00000509102 RPL12P30050 165 aaKnown RBP13.26□□□□□ -0.29
UBE3D-207ENST00000509102 UBE2DNLQ8IWF7 75 aa13.26□□□□□ -0.29
UBE3D-207ENST00000509102 TMEM263Q8WUH6 116 aaKnown RBP13.26□□□□□ -0.29
UBE3D-207ENST00000509102 TIMM8BQ9Y5J9 83 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-207ENST00000509102 PTTG1O95997 202 aa13.25□□□□□ -0.29
UBE3D-207ENST00000509102 PRM2P04554 102 aa13.25□□□□□ -0.29
UBE3D-207ENST00000509102 GFI1BQ5VTD9 330 aa13.25□□□□□ -0.29
UBE3D-207ENST00000509102 MIR17HGQ75NE6 70 aa13.25□□□□□ -0.29
UBE3D-207ENST00000509102 POM121L12Q8N7R1 296 aa13.25□□□□□ -0.29
UBE3D-207ENST00000509102 SLC25A2Q9BXI2 301 aa13.25□□□□□ -0.29
UBE3D-207ENST00000509102 OR51M1Q9H341 326 aa13.25□□□□□ -0.29
UBE3D-207ENST00000509102 MBD2Q9UBB5 411 aa13.25□□□□□ -0.29
UBE3D-207ENST00000509102 FUT9Q9Y231 359 aa13.25□□□□□ -0.29
UBE3D-207ENST00000509102 J3KRW8 73 aa13.24□□□□□ -0.29
UBE3D-207ENST00000509102 M0R3E3 92 aa13.24□□□□□ -0.29
UBE3D-207ENST00000509102 NBEAP1P0C6P0 100 aa13.24□□□□□ -0.29
UBE3D-207ENST00000509102 AZU1P20160 251 aa13.24□□□□□ -0.29
UBE3D-207ENST00000509102 PAXXQ9BUH6 204 aa13.24□□□□□ -0.29
UBE3D-207ENST00000509102 PARD6GQ9BYG4 376 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-207ENST00000509102 OR7C2O60412 319 aa13.23□□□□□ -0.29
UBE3D-207ENST00000509102 NDUFB4O95168 129 aa13.23□□□□□ -0.29
UBE3D-207ENST00000509102 CT45A10P0DMU9 189 aa13.23□□□□□ -0.29
UBE3D-207ENST00000509102 TAS2R45P59539 299 aa13.23□□□□□ -0.29
UBE3D-207ENST00000509102 FFAR4Q5NUL3 377 aa13.23□□□□□ -0.29
UBE3D-207ENST00000509102 C15orf53Q8NAA6 179 aa13.23□□□□□ -0.29
UBE3D-207ENST00000509102 LINC00477Q96M19 166 aa13.23□□□□□ -0.29
UBE3D-207ENST00000509102 SMIM3Q9BZL3 60 aa13.23□□□□□ -0.29
UBE3D-207ENST00000509102 ALG5Q9Y673 324 aa13.23□□□□□ -0.29
UBE3D-207ENST00000509102 SLC25A5P05141 298 aaKnown RBP13.22□□□□□ -0.29
UBE3D-207ENST00000509102 ATP5G1P05496 136 aa13.22□□□□□ -0.29
UBE3D-207ENST00000509102 ATP5G3P48201 142 aa13.22□□□□□ -0.29
UBE3D-207ENST00000509102 ICAM4Q14773 271 aa13.22□□□□□ -0.29
UBE3D-207ENST00000509102 TMEM78Q5T7P6 136 aa13.22□□□□□ -0.29
UBE3D-207ENST00000509102 TMEM88Q6PEY1 159 aa13.22□□□□□ -0.29
UBE3D-207ENST00000509102 EXOC3-AS1Q8N2X6 119 aa13.22□□□□□ -0.29
UBE3D-207ENST00000509102 RNF141Q8WVD5 230 aa13.22□□□□□ -0.29
UBE3D-207ENST00000509102 FAM167A-AS1Q96KT0 104 aa13.22□□□□□ -0.29
UBE3D-207ENST00000509102 PYGO2Q9BRQ0 406 aa13.22□□□□□ -0.29
UBE3D-207ENST00000509102 TRAV12-3A0A0B4J271 114 aa13.21□□□□□ -0.29
UBE3D-207ENST00000509102 CBY3A6NI87 242 aa13.21□□□□□ -0.29
UBE3D-207ENST00000509102 SNURFLB1AK76 121 aa13.21□□□□□ -0.29
UBE3D-207ENST00000509102 OR10J4P0C629 311 aa13.21□□□□□ -0.29
UBE3D-207ENST00000509102 CSN1S1P47710 185 aa13.21□□□□□ -0.29
UBE3D-207ENST00000509102 KHDC3LQ587J8 217 aa13.21□□□□□ -0.29
UBE3D-207ENST00000509102 FAM122CQ6P4D5 195 aa13.21□□□□□ -0.29
UBE3D-207ENST00000509102 RNASE8Q8TDE3 154 aaKnown RBP13.21□□□□□ -0.29
UBE3D-207ENST00000509102 MED28Q9H204 178 aa13.21□□□□□ -0.29
UBE3D-207ENST00000509102 NOP10Q9NPE3 64 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms