RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 DCANP1Q8TF63 244 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 RPUSD4Q96CM3 377 aaKnown RBP13.12□□□□□ -0.31
RNF4-209ENST00000507784 C20orf173Q96LM9 149 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 MCRIP2Q9BUT9 160 aaKnown RBP13.12□□□□□ -0.31
RNF4-209ENST00000507784 CLEC5AQ9NY25 188 aa13.12□□□□□ -0.31
RNF4-209ENST00000507784 PEX7O00628 323 aa13.11□□□□□ -0.31
RNF4-209ENST00000507784 IGLV1-51P01701 117 aa13.11□□□□□ -0.31
RNF4-209ENST00000507784 ZNF688P0C7X2 276 aa13.11□□□□□ -0.31
RNF4-209ENST00000507784 AKR1C3P42330 323 aa13.11□□□□□ -0.31
RNF4-209ENST00000507784 LCN12Q6JVE5 192 aa13.11□□□□□ -0.31
RNF4-209ENST00000507784 OR2K2Q8NGT1 345 aa13.11□□□□□ -0.31
RNF4-209ENST00000507784 TENM1Q9UKZ4 2725 aa13.1□□□□□ -0.31
RNF4-209ENST00000507784 TMEM218A2RU14 115 aa13.1□□□□□ -0.31
RNF4-209ENST00000507784 OR4C46A6NHA9 309 aa13.1□□□□□ -0.31
RNF4-209ENST00000507784 TMEM250H0YL14 139 aa13.1□□□□□ -0.31
RNF4-209ENST00000507784 TCRAP04437 139 aa13.1□□□□□ -0.31
RNF4-209ENST00000507784 GOLT1AQ6ZVE7 132 aa13.1□□□□□ -0.31
RNF4-209ENST00000507784 FAM24BQ8N5W8 94 aa13.1□□□□□ -0.31
RNF4-209ENST00000507784 HIST1H2BAQ96A08 127 aa13.1□□□□□ -0.31
RNF4-209ENST00000507784 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
RNF4-209ENST00000507784 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 F8W036 122 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 K7EQM0 130 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 IGLL1P15814 213 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 INSL3P51460 131 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 CNN1P51911 297 aaKnown RBP13.09□□□□□ -0.31
RNF4-209ENST00000507784 SNRPD3P62318 126 aaKnown RBP13.09□□□□□ -0.31
RNF4-209ENST00000507784 PSMG4Q5JS54 123 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 SOHLH1Q5JUK2 328 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 WFDC9Q8NEX5 89 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 TCEAL7Q9BRU2 100 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 ATG101Q9BSB4 218 aa13.09□□□□□ -0.31
RNF4-209ENST00000507784 TRAV34A0A0B4J273 112 aa13.08□□□□□ -0.32
RNF4-209ENST00000507784 PRAC2D3DTV9 90 aa13.08□□□□□ -0.32
RNF4-209ENST00000507784 NDUFS6O75380 124 aaKnown RBP13.08□□□□□ -0.32
RNF4-209ENST00000507784 C11orf52Q96A22 123 aa13.08□□□□□ -0.32
RNF4-209ENST00000507784 MRPL53Q96EL3 112 aaKnown RBP13.08□□□□□ -0.32
RNF4-209ENST00000507784 SGK494Q96LW2 274 aa13.08□□□□□ -0.32
RNF4-209ENST00000507784 LINC00479Q96M42 142 aa13.08□□□□□ -0.32
RNF4-209ENST00000507784 PARLQ9H300 379 aa13.08□□□□□ -0.32
RNF4-209ENST00000507784 IGKV2-40A0A087WW87 121 aaPredicted RBP13.07□□□□□ -0.32
RNF4-209ENST00000507784 ZNF727A8MUV8 499 aa13.07□□□□□ -0.32
RNF4-209ENST00000507784 IGKV2D-40P01614 121 aaPredicted RBP13.07□□□□□ -0.32
RNF4-209ENST00000507784 UBE2G1P62253 170 aa13.07□□□□□ -0.32
RNF4-209ENST00000507784 DERL1Q9BUN8 251 aa13.07□□□□□ -0.32
RNF4-209ENST00000507784 DEFB131AP59861 70 aa13.06□□□□□ -0.32
RNF4-209ENST00000507784 DEFB1P60022 68 aa13.06□□□□□ -0.32
RNF4-209ENST00000507784 ARL6IP6Q8N6S5 226 aa13.06□□□□□ -0.32
RNF4-209ENST00000507784 SMIM7Q9BQ49 75 aa13.06□□□□□ -0.32
RNF4-209ENST00000507784 SERTM2A0A1B0GWG4 89 aa13.05□□□□□ -0.32
RNF4-209ENST00000507784 ATP6V1G1O75348 118 aa13.05□□□□□ -0.32
RNF4-209ENST00000507784 ZNF705DP0CH99 300 aaPredicted RBP13.05□□□□□ -0.32
RNF4-209ENST00000507784 ZNF705BP0CI00 300 aaPredicted RBP13.05□□□□□ -0.32
RNF4-209ENST00000507784 RPL35P42766 123 aaKnown RBP13.05□□□□□ -0.32
RNF4-209ENST00000507784 ERCC8Q13216 396 aa13.05□□□□□ -0.32
RNF4-209ENST00000507784 OR10J6PQ8NGY7 276 aa13.05□□□□□ -0.32
RNF4-209ENST00000507784 C2CD4CQ8TF44 421 aa13.05□□□□□ -0.32
RNF4-209ENST00000507784 TRAV8-1A0A0A6YYK1 113 aa13.04□□□□□ -0.32
RNF4-209ENST00000507784 F6UB75 175 aa13.04□□□□□ -0.32
RNF4-209ENST00000507784 S100A9P06702 114 aaKnown RBP13.04□□□□□ -0.32
RNF4-209ENST00000507784 HIST1H1AQ02539 215 aaPredicted RBP13.04□□□□□ -0.32
RNF4-209ENST00000507784 TMEM183BQ1AE95 376 aa13.04□□□□□ -0.32
RNF4-209ENST00000507784 PRNTQ86SH4 94 aa13.04□□□□□ -0.32
RNF4-209ENST00000507784 FMC1Q96HJ9 113 aa13.04□□□□□ -0.32
RNF4-209ENST00000507784 VGLL1Q99990 258 aa13.04□□□□□ -0.32
RNF4-209ENST00000507784 MAP6D1Q9H9H5 199 aa13.04□□□□□ -0.32
RNF4-209ENST00000507784 PSG8Q9UQ74 426 aa13.04□□□□□ -0.32
RNF4-209ENST00000507784 ZNF256Q9Y2P7 627 aaPredicted RBP13.04□□□□□ -0.32
RNF4-209ENST00000507784 KRBOX1C9JBD0 128 aa13.03□□□□□ -0.32
RNF4-209ENST00000507784 ADCYAP1P18509 176 aa13.03□□□□□ -0.32
RNF4-209ENST00000507784 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
RNF4-209ENST00000507784 TAS2R60P59551 318 aa13.03□□□□□ -0.32
RNF4-209ENST00000507784 FLI1Q01543 452 aaPredicted RBP13.03□□□□□ -0.32
RNF4-209ENST00000507784 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
RNF4-209ENST00000507784 PRR31Q5SQ13 230 aa13.03□□□□□ -0.32
RNF4-209ENST00000507784 EBLN2Q6P2I7 272 aa13.03□□□□□ -0.32
RNF4-209ENST00000507784 TMEM75Q8N9X5 138 aa13.03□□□□□ -0.32
RNF4-209ENST00000507784 ASCL2Q99929 193 aa13.03□□□□□ -0.32
RNF4-209ENST00000507784 SEC11CQ9BY50 192 aa13.03□□□□□ -0.32
RNF4-209ENST00000507784 GPR61Q9BZJ8 451 aa13.03□□□□□ -0.32
RNF4-209ENST00000507784 RBAKDNA6NC62 111 aa13.02□□□□□ -0.33
RNF4-209ENST00000507784 GNG4P50150 75 aa13.02□□□□□ -0.33
RNF4-209ENST00000507784 TMEM241Q24JQ0 296 aa13.02□□□□□ -0.33
RNF4-209ENST00000507784 TMEM78Q5T7P6 136 aa13.02□□□□□ -0.33
RNF4-209ENST00000507784 OR8A1Q8NGG7 326 aa13.02□□□□□ -0.33
RNF4-209ENST00000507784 KNCNA6PVL3 124 aa13.01□□□□□ -0.33
RNF4-209ENST00000507784 OR11H12B2RN74 326 aa13.01□□□□□ -0.33
RNF4-209ENST00000507784 BEAN1Q3B7T3 259 aa13.01□□□□□ -0.33
RNF4-209ENST00000507784 CENPWQ5EE01 88 aa13.01□□□□□ -0.33
RNF4-209ENST00000507784 BAGE2Q86Y30 109 aa13.01□□□□□ -0.33
RNF4-209ENST00000507784 APRG1Q8IVJ8 170 aa13.01□□□□□ -0.33
RNF4-209ENST00000507784 NIPSNAP3BQ9BS92 247 aa13.01□□□□□ -0.33
RNF4-209ENST00000507784 AGPAT4-IT1Q9H0P7 198 aa13.01□□□□□ -0.33
RNF4-209ENST00000507784 NAT8Q9UHE5 227 aa13.01□□□□□ -0.33
RNF4-209ENST00000507784 KLF12Q9Y4X4 402 aa13.01□□□□□ -0.33
RNF4-209ENST00000507784 PGPEP1LA6NFU8 196 aa13□□□□□ -0.33
RNF4-209ENST00000507784 APOC3P02656 99 aa13□□□□□ -0.33
RNF4-209ENST00000507784 CD7P09564 240 aa13□□□□□ -0.33
RNF4-209ENST00000507784 ZNF124Q15973 351 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms