RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SH2D6Q7Z4S9 175 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 EIF4E3Q8N5X7 224 aaKnown RBP4.59□□□□□ -1.67
VCAN-207ENST00000507162 SLC35E1Q96K37 410 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 TMEM147Q9BVK8 224 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.59□□□□□ -1.67
VCAN-207ENST00000507162 PLCXD1Q9NUJ7 323 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 RHBDL2Q9NX52 303 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 TP53TG3Q9ULZ0 132 aa4.59□□□□□ -1.67
VCAN-207ENST00000507162 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 GGTLC3B5MD39 225 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 PRAC2D3DTV9 90 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 SNRPCP09234 159 aaKnown RBP4.58□□□□□ -1.68
VCAN-207ENST00000507162 CT45A10P0DMU9 189 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 LEPP41159 167 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 TIRAPP58753 221 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 SP6Q3SY56 376 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 ANXA2RQ3ZCQ2 193 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 GGNBP1Q5YKI7 109 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 DAZ4Q86SG3 579 aaKnown RBP4.58□□□□□ -1.68
VCAN-207ENST00000507162 IQCF2Q8IXL9 164 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 RMI2Q96E14 147 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 TP53RKQ96S44 253 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 TRGV9Q99603 122 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 C1orf43Q9BWL3 253 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 AUNIPQ9H7T9 357 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 DAZ3Q9NR90 486 aaKnown RBP4.58□□□□□ -1.68
VCAN-207ENST00000507162 FKBP14Q9NWM8 211 aa4.58□□□□□ -1.68
VCAN-207ENST00000507162 LINC00854A0A1B0GVQ3 168 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 C7orf71A4D174 169 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 PHOX2AO14813 284 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 TNFRSF6BO95407 300 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 PFN1P07737 140 aaKnown RBP4.57□□□□□ -1.68
VCAN-207ENST00000507162 PI3P19957 117 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 HLA-DMAP28067 261 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 S100A7P31151 101 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 RNASE4P34096 147 aaKnown RBP4.57□□□□□ -1.68
VCAN-207ENST00000507162 TAS2R46P59540 309 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 PRR4Q16378 134 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 NMSQ5H8A3 153 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 C8orf59Q8N0T1 100 aaPredicted RBP4.57□□□□□ -1.68
VCAN-207ENST00000507162 DHRSXQ8N5I4 330 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 ZC2HC1AQ96GY0 325 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 DNAJC30Q96LL9 226 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 SSR3Q9UNL2 185 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 KIF25-AS1Q9Y6Z4 181 aa4.57□□□□□ -1.68
VCAN-207ENST00000507162 IGHV3-16A0A0C4DH30 117 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 RGS10O43665 173 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 CFDP00746 253 aaPredicted RBP4.56□□□□□ -1.68
VCAN-207ENST00000507162 GNAO1P09471 354 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 RPL7P18124 248 aaKnown RBP4.56□□□□□ -1.68
VCAN-207ENST00000507162 ANXA7P20073 488 aaKnown RBP4.56□□□□□ -1.68
VCAN-207ENST00000507162 GPX4P36969 197 aaPredicted RBP4.56□□□□□ -1.68
VCAN-207ENST00000507162 RAB32Q13637 225 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 VWC2Q2TAL6 325 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 C14orf177Q52M58 125 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 C22orf42Q6IC83 251 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 ZFP1Q6P2D0 407 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 BPIFCQ8NFQ6 507 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 OR10P1Q8NGE3 313 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 C7orf33Q8WU49 177 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 PAIP2BQ9ULR5 123 aaKnown RBP4.56□□□□□ -1.68
VCAN-207ENST00000507162 SLC45A2Q9UMX9 530 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 U3KQ87 197 aa4.56□□□□□ -1.68
VCAN-207ENST00000507162 C3orf85A0A1B0GTC6 90 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 MPDU1O75352 247 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 SLC25A5P05141 298 aaKnown RBP4.55□□□□□ -1.68
VCAN-207ENST00000507162 PIGPP57054 158 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 VAMP2P63027 116 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 MLLT11Q13015 90 aaPredicted RBP4.55□□□□□ -1.68
VCAN-207ENST00000507162 BTN1A1Q13410 526 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 MEF2DQ14814 521 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 IBA57Q5T440 356 aaKnown RBP4.55□□□□□ -1.68
VCAN-207ENST00000507162 DPPA3Q6W0C5 159 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 TMEM182Q6ZP80 229 aaPredicted RBP4.55□□□□□ -1.68
VCAN-207ENST00000507162 LGI3Q8N145 548 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 OR4C5Q8NGB2 326 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 OR10G4Q8NGN3 311 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 OR5H6Q8NGV6 325 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 GTSF1Q8WW33 167 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 MGLLQ99685 303 aa4.55□□□□□ -1.68
VCAN-207ENST00000507162 A0A087WWL8 130 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 A0A087WYN8 130 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 A0A087X0K7 114 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 PMS2P5A8MQ11 134 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 H3BRN7 92 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 H3BTX0 84 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 H7C1H1 209 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 OR5G3P0C626 314 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 UCP3P55916 312 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 RAP2BP61225 183 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 ERCC8Q13216 396 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 SDIM1Q6ZPB5 146 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 SLC25A38Q96DW6 304 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 C2orf50Q96LR7 162 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 SHANK2-AS3Q9BTD1 123 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 TMEM222Q9H0R3 208 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 SCN3BQ9NY72 215 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 HIGD1AQ9Y241 93 aa4.54□□□□□ -1.68
VCAN-207ENST00000507162 IGHV1OR15-1A0A075B7D0 117 aa4.53□□□□□ -1.68
VCAN-207ENST00000507162 TRDV1A0A1B0GX56 115 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms