RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 OR1L4Q8NGR5 311 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 OR2T35Q8NGX2 323 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 GPR82Q96P67 336 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 CLEC5AQ9NY25 188 aa6.93□□□□□ -1.3
CLCN3-205ENST00000506924 TRAV8-2A0A0B4J237 113 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 KIR2DL5BA0A0G2JN68 375 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 KIR2DL5BA0A0G2JPC4 375 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 ISLRO14498 428 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 MRPS12O15235 138 aaKnown RBP6.92□□□□□ -1.3
CLCN3-205ENST00000506924 MPDU1O75352 247 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 EIF3GO75821 320 aaKnown RBP eCLIP6.92□□□□□ -1.3
CLCN3-205ENST00000506924 IFNA5P01569 189 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 ZNF705DP0CH99 300 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-205ENST00000506924 ZNF705BP0CI00 300 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-205ENST00000506924 C4BPBP20851 252 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 PSMB3P49720 205 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 FAM3BP58499 235 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-205ENST00000506924 S100A7AQ86SG5 101 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 KIR2DL5AQ8N109 375 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 OR4B1Q8NGF8 309 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 KIR2DL5BQ8NHK3 375 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 LRRC20Q8TCA0 184 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 SCGB1C1Q8TD33 95 aa6.92□□□□□ -1.3
CLCN3-205ENST00000506924 SEPSECSQ9HD40 501 aaKnown RBP6.92□□□□□ -1.3
CLCN3-205ENST00000506924 C17orf112F2Z3M2 114 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 H3BMM0 161 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 H3BQ15 152 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 UBE2CO00762 179 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 GIG44P09565 113 aaPredicted RBP6.91□□□□□ -1.3
CLCN3-205ENST00000506924 MEOX2P50222 304 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 FFAR4Q5NUL3 377 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 FAM78BQ5VT40 261 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 MIR17HGQ75NE6 70 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 BPIFA4PQ86YQ2 179 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 ZNF738Q8NE65 137 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 RNF183Q96D59 192 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 PFDN5Q99471 154 aa6.91□□□□□ -1.3
CLCN3-205ENST00000506924 A0A087X0K7 114 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 ZNF705FA8MVS1 300 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-205ENST00000506924 G3V3Q6 166 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 SLC17A3O00476 420 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 PYYP10082 97 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 HLA-DRB4P13762 266 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 ANXA2RQ3ZCQ2 193 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 EBLN2Q6P2I7 272 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 HSD17B11Q8NBQ5 300 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 INO80EQ8NBZ0 244 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-205ENST00000506924 GATAD1Q8WUU5 269 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 AQP10Q96PS8 301 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 TM2D2Q9BX73 214 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 SLC25A2Q9BXI2 301 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 SAV1Q9H4B6 383 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-205ENST00000506924 EDA2RQ9HAV5 297 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 RPRMQ9NS64 109 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 XCL2Q9UBD3 114 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 HLA-DRB4X5D2U9 266 aa6.9□□□□□ -1.3
CLCN3-205ENST00000506924 A0A0J9YWU9 116 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 A0A0J9YX75 114 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 RNF222A6NCQ9 220 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 DEFB4AO15263 64 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 ARPC5O15511 151 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 IGLC2P0DOY2 106 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 ZFAND6Q6FIF0 208 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 FOXI2Q6ZQN5 318 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 OR11H2Q8NH07 326 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 BLNKQ8WV28 456 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 ASB13Q8WXK3 278 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 SLC35B3Q9H1N7 401 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 ZNF586Q9NXT0 402 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 TNFSF18Q9UNG2 199 aa6.89□□□□□ -1.31
CLCN3-205ENST00000506924 PRAC2D3DTV9 90 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 OR10J4P0C629 311 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 SPP1P10451 314 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 RAB2AP61019 212 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 HIST1H1AQ02539 215 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-205ENST00000506924 PSG3Q16557 428 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 SAMD13Q5VXD3 122 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 RPL7L1Q6DKI1 246 aaKnown RBP6.88□□□□□ -1.31
CLCN3-205ENST00000506924 MORN3Q6PF18 240 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-205ENST00000506924 FAM167A-AS1Q96KT0 104 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 RARRES2Q99969 163 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 MFFQ9GZY8 342 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 SH3BGRL3Q9H299 93 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 HRH4Q9H3N8 390 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 ZNF331Q9NQX6 463 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-205ENST00000506924 KCNIP2Q9NS61 270 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 RNF24Q9Y225 148 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 FUT9Q9Y231 359 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 TP53TG1Q9Y2A0 90 aa6.88□□□□□ -1.31
CLCN3-205ENST00000506924 STAB2Q8WWQ8 2551 aa6.87□□□□□ -1.31
CLCN3-205ENST00000506924 IGHV3OR16-12A0A075B7B8 117 aa6.87□□□□□ -1.31
CLCN3-205ENST00000506924 HMGB3O15347 200 aaKnown RBP6.87□□□□□ -1.31
CLCN3-205ENST00000506924 ATP6V0CP27449 155 aa6.87□□□□□ -1.31
CLCN3-205ENST00000506924 CNN1P51911 297 aaKnown RBP6.87□□□□□ -1.31
CLCN3-205ENST00000506924 NUTF2P61970 127 aaKnown RBP6.87□□□□□ -1.31
CLCN3-205ENST00000506924 PSG9Q00887 426 aa6.87□□□□□ -1.31
CLCN3-205ENST00000506924 FAM122CQ6P4D5 195 aa6.87□□□□□ -1.31
CLCN3-205ENST00000506924 LCN15Q6UWW0 184 aa6.87□□□□□ -1.31
CLCN3-205ENST00000506924 EXOC3-AS1Q8N2X6 119 aa6.87□□□□□ -1.31
CLCN3-205ENST00000506924 OR11H4Q8NGC9 324 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms