RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 OTORQ9NRC9 128 aa6.26□□□□□ -1.41
PDGFC-205ENST00000506880 STAB2Q8WWQ8 2551 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 PRKDCP78527 4128 aaKnown RBP6.25□□□□□ -1.41
PDGFC-205ENST00000506880 SULT1A2P50226 295 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 LEMD1Q68G75 181 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 MIR17HGQ75NE6 70 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 C9orf62Q8N4C0 152 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 DEFB125Q8N687 156 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 OR8A1Q8NGG7 326 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 IL17DQ8TAD2 202 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 FXYD5Q96DB9 178 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 NEU1Q99519 415 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 ZNF586Q9NXT0 402 aa6.25□□□□□ -1.41
PDGFC-205ENST00000506880 TEX48A0A1B0GUV7 120 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 RBMY1BA6NDE4 496 aaKnown RBP6.24□□□□□ -1.41
PDGFC-205ENST00000506880 RBMY1EA6NEQ0 496 aaKnown RBP6.24□□□□□ -1.41
PDGFC-205ENST00000506880 F6UZH7 168 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 H3BQ15 152 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 RBMY1DP0C7P1 496 aaKnown RBP6.24□□□□□ -1.41
PDGFC-205ENST00000506880 GCHFRP30047 84 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 TFPI2P48307 235 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 HAGHQ16775 308 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 C9orf47Q6ZRZ4 202 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 C5orf17Q8NAS9 161 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 ZNF738Q8NE65 137 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 HIST1H2BAQ96A08 127 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 RPUSD4Q96CM3 377 aaKnown RBP6.24□□□□□ -1.41
PDGFC-205ENST00000506880 C17orf77Q96MU5 243 aa6.24□□□□□ -1.41
PDGFC-205ENST00000506880 hCG_2014768A0A024R1R8 64 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 IGKV3-7A0A075B6H7 116 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 TRAV8-2A0A0B4J237 113 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 TMEM189A5PLL7 270 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 NPIPB6E9PJ23 425 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 SMLR1H3BR10 107 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 NDUFB4O95168 129 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 S100A9P06702 114 aaKnown RBP6.23□□□□□ -1.41
PDGFC-205ENST00000506880 ARL14EPLP0DKL9 152 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 BLOC1S1P78537 153 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 GCSAMLQ5JQS6 135 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 ACTL10Q5JWF8 245 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 MORN5Q5VZ52 161 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 FAM122CQ6P4D5 195 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 CMTM2Q8TAZ6 248 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 RNF183Q96D59 192 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 LINC00052Q96N35 136 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 RCHY1Q96PM5 261 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 SH3BGRL3Q9H299 93 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 MANBALQ9NQG1 85 aa6.23□□□□□ -1.41
PDGFC-205ENST00000506880 TGP01266 2768 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 MAP1LC3B2A6NCE7 125 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
PDGFC-205ENST00000506880 H2AFB1P0C5Y9 115 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 MIFP14174 115 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 CRISP2P16562 243 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 LEPP41159 167 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 CDKN1BP46527 198 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 TMEM78Q5T7P6 136 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 FAM24BQ8N5W8 94 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 ZNF503Q96F45 646 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 CITED4Q96RK1 184 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 MAP1LC3BQ9GZQ8 125 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 Q9H3A6 140 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 C11orf68Q9H3H3 251 aaKnown RBP6.22□□□□□ -1.41
PDGFC-205ENST00000506880 UBQLN2Q9UHD9 624 aa6.22□□□□□ -1.41
PDGFC-205ENST00000506880 NBEAL2Q6ZNJ1 2754 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 COL7A1Q02388 2944 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 TRAV5A0A0B4J249 113 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 TRBV6-1A0A0K0K1D8 114 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF705EA8MWA4 302 aaPredicted RBP6.21□□□□□ -1.42
PDGFC-205ENST00000506880 BOLA2-SMG1P6H3BVE0 249 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 SPRY2O43597 315 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 IFNA1P01562 189 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 PYYP10082 97 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 CNN1P51911 297 aaKnown RBP6.21□□□□□ -1.42
PDGFC-205ENST00000506880 APRG1Q8IVJ8 170 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 SBSPONQ8IVN8 264 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 SMIM12Q96EX1 92 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 IGF2BP2-AS1Q96M15 143 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 LINC00467Q9BRT7 94 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 ATG101Q9BSB4 218 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 GOLT1BQ9Y3E0 138 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 U3KQK5 164 aa6.21□□□□□ -1.42
PDGFC-205ENST00000506880 A0A1B0GVG6 124 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 DIRC3C9JPN6 131 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 SLC17A3O00476 420 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 CA1P00915 261 aaPredicted RBP6.2□□□□□ -1.42
PDGFC-205ENST00000506880 INSP01308 110 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 IFNA7P01567 189 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 RANP62826 216 aaKnown RBP6.2□□□□□ -1.42
PDGFC-205ENST00000506880 ICAM4Q14773 271 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 SAPCD1Q5SSQ6 148 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 AMTNQ6UX39 209 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF705AQ6ZN79 300 aaPredicted RBP6.2□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF493Q6ZR52 646 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 TMEM75Q8N9X5 138 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 LYPD6BQ8NI32 183 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 BLNKQ8WV28 456 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 C20orf173Q96LM9 149 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 NDFIP1Q9BT67 221 aa6.2□□□□□ -1.42
PDGFC-205ENST00000506880 SMDT1Q9H4I9 107 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms