RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 COL7A1Q02388 2944 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 A0A0J9YX75 114 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 A0A1W2PPV4 95 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 A8MTW9 85 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 ZNF705FA8MVS1 300 aaPredicted RBP4.18□□□□□ -1.74
USP46-206ENST00000506707 UBE2CO00762 179 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 HMGB3O15347 200 aaKnown RBP4.18□□□□□ -1.74
USP46-206ENST00000506707 BCL2L11O43521 198 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 MBP02144 154 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 OR10J4P0C629 311 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 SEC11BP0C7V7 166 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 ZNF705DP0CH99 300 aaPredicted RBP4.18□□□□□ -1.74
USP46-206ENST00000506707 ZNF705BP0CI00 300 aaPredicted RBP4.18□□□□□ -1.74
USP46-206ENST00000506707 MED14OSP0DP75 135 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 PRB4P10163 310 aaPredicted RBP4.18□□□□□ -1.74
USP46-206ENST00000506707 HLA-DRB4P13762 266 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 APOC4P55056 127 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 PDE6HQ13956 83 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 ZNF726P1Q15940 193 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 TMEM41BQ5BJD5 291 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 FAM122CQ6P4D5 195 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 LCN15Q6UWW0 184 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 FOXI2Q6ZQN5 318 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 Q6ZWC4 215 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 STHQ8IWL8 128 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 LRRC20Q8TCA0 184 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 BLNKQ8WV28 456 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 RAB24Q969Q5 203 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 CLUHP3Q96NS8 147 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 SLC50A1Q9BRV3 221 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 PAXXQ9BUH6 204 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 HLA-DRB4X5D2U9 266 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 TGP01266 2768 aa4.18□□□□□ -1.74
USP46-206ENST00000506707 NBEAL2Q6ZNJ1 2754 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 KANTRA0A1W2PQU2 76 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 PRAC2D3DTV9 90 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 M0R3E3 92 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 OR7C2O60412 319 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 IGKV3-20P01619 116 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 STAG3L2P0CL84 134 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 STAG3L3P0CL85 134 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 CDC34P49427 236 aaPredicted RBP4.17□□□□□ -1.74
USP46-206ENST00000506707 FHITP49789 147 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 TAS2R45P59539 299 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 KHDC3LQ587J8 217 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 EBLN2Q6P2I7 272 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 AMTNQ6UX39 209 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 PQLC2Q6ZP29 291 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 SSX7Q7RTT5 188 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 BAP18Q8IXM2 172 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 EXOC3-AS1Q8N2X6 119 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 C9orf62Q8N4C0 152 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 CSNK1G2-AS1Q8NCQ2 148 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 ZNF738Q8NE65 137 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 OR8A1Q8NGG7 326 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 SUN5Q8TC36 379 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 RPUSD4Q96CM3 377 aaKnown RBP4.17□□□□□ -1.74
USP46-206ENST00000506707 RNF183Q96D59 192 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 PHYHIPLQ96FC7 376 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 OVOL2Q9BRP0 275 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 ZNF471Q9BX82 626 aaPredicted RBP4.17□□□□□ -1.74
USP46-206ENST00000506707 ACTR3CQ9C0K3 210 aaPredicted RBP4.17□□□□□ -1.74
USP46-206ENST00000506707 ZMAT4Q9H898 229 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 RETNQ9HD89 108 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 CLEC5AQ9NY25 188 aa4.17□□□□□ -1.74
USP46-206ENST00000506707 SPRY2O43597 315 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 PFDN1O60925 122 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 CA1P00915 261 aaPredicted RBP4.16□□□□□ -1.74
USP46-206ENST00000506707 ARL14EPLP0DKL9 152 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 TPT1P13693 172 aaKnown RBP4.16□□□□□ -1.74
USP46-206ENST00000506707 C4BPBP20851 252 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 CNN1P51911 297 aaKnown RBP4.16□□□□□ -1.74
USP46-206ENST00000506707 NKX2-5P52952 324 aaPredicted RBP4.16□□□□□ -1.74
USP46-206ENST00000506707 NUTF2P61970 127 aaKnown RBP4.16□□□□□ -1.74
USP46-206ENST00000506707 RANP62826 216 aaKnown RBP4.16□□□□□ -1.74
USP46-206ENST00000506707 PSG9Q00887 426 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 ICAM4Q14773 271 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 DEFB135Q30KP9 77 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 ZFP69Q49AA0 526 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 AKR1C8PQ5T2L2 129 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 MORN3Q6PF18 240 aaPredicted RBP4.16□□□□□ -1.74
USP46-206ENST00000506707 LYPD1Q8N2G4 141 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 OR4B1Q8NGF8 309 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 STOML3Q8TAV4 291 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 TMED6Q8WW62 240 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 MRPL53Q96EL3 112 aaKnown RBP4.16□□□□□ -1.74
USP46-206ENST00000506707 RCHY1Q96PM5 261 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 SPATA25Q9BR10 227 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 SLC35B3Q9H1N7 401 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 PRELID1Q9Y255 219 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 TP53TG1Q9Y2A0 90 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 U3KQK5 164 aa4.16□□□□□ -1.74
USP46-206ENST00000506707 CTXND1A0A1B0GTU2 59 aa4.15□□□□□ -1.75
USP46-206ENST00000506707 PGPA6NDG6 321 aa4.15□□□□□ -1.75
USP46-206ENST00000506707 UMAD1C9J7I0 102 aa4.15□□□□□ -1.75
USP46-206ENST00000506707 CRXO43186 299 aaPredicted RBP4.15□□□□□ -1.75
USP46-206ENST00000506707 DUSP14O95147 198 aaKnown RBP4.15□□□□□ -1.75
USP46-206ENST00000506707 CXorf1O96002 111 aa4.15□□□□□ -1.75
USP46-206ENST00000506707 GCHFRP30047 84 aa4.15□□□□□ -1.75
USP46-206ENST00000506707 FXYD7P58549 80 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms